RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeast

Gene PRE7, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE7	YBL041W	YPT6	Q99260	215 aa		4.64	□□□□□ -1.67
PRE7	YBL041W	RAP1	P11938	827 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	UNG1	P12887	359 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	PHO81	P17442	1178 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	VPS41	P38959	992 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	DSS1	P39112	969 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	YEL057C	P39983	233 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	LYS12	P40495	371 aa	Known RBP	4.63	□□□□□ -1.67
PRE7	YBL041W	PKP1	P40530	394 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	GAB1	P41733	394 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	PMT4	P46971	762 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	RPS12	P48589	143 aa	Known RBP	4.63	□□□□□ -1.67
PRE7	YBL041W	UBC9	P50623	157 aa	Predicted RBP	4.63	□□□□□ -1.67
PRE7	YBL041W	TPC1	P53257	314 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	YLR460C	P54007	376 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	YPL068C	Q02749	293 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	SKI8	Q02793	397 aa	Predicted RBP	4.63	□□□□□ -1.67
PRE7	YBL041W	YHC1	Q05900	231 aa	Known RBP	4.63	□□□□□ -1.67
PRE7	YBL041W	FAR10	Q06001	478 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	YLL007C	Q07799	665 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	GPN2	Q08726	347 aa	Predicted RBP	4.63	□□□□□ -1.67
PRE7	YBL041W	YKL018C-A	Q3E7A7	99 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	MDM12	Q92328	271 aa		4.63	□□□□□ -1.67
PRE7	YBL041W	MCK1	P21965	375 aa	Known RBP	4.62	□□□□□ -1.67
PRE7	YBL041W	YCL049C	P25577	312 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	PBN1	P25580	416 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	NUP2	P32499	720 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	LTV1	P34078	463 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	DHR2	P36009	735 aa	Predicted RBP	4.62	□□□□□ -1.67
PRE7	YBL041W	SNU114	P36048	1008 aa	Known RBP	4.62	□□□□□ -1.67
PRE7	YBL041W	TDA11	P38854	504 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	YJL068C	P40363	299 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	CIN1	P40987	1014 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	TRS85	P46944	698 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	EMC2	P47133	292 aa	Known RBP	4.62	□□□□□ -1.67
PRE7	YBL041W	PAC10	P48363	199 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	BPL1	P48445	690 aa	Predicted RBP	4.62	□□□□□ -1.67
PRE7	YBL041W	RPN14	P53196	417 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	BSC5	P53755	489 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	PDR16	P53860	351 aa	Known RBP	4.62	□□□□□ -1.67
PRE7	YBL041W	YMR010W	Q03687	405 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	CGI121	Q03705	181 aa	Known RBP	4.62	□□□□□ -1.67
PRE7	YBL041W	SSQ1	Q05931	657 aa	Predicted RBP	4.62	□□□□□ -1.67
PRE7	YBL041W	YLR446W	Q06204	433 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	YLR036C	Q07986	203 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	PRS5	Q12265	496 aa	Known RBP	4.62	□□□□□ -1.67
PRE7	YBL041W	SNF8	Q12483	233 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	NOP58	Q12499	511 aa	Known RBP	4.62	□□□□□ -1.67
PRE7	YBL041W	Q0142	Q9ZZW4	58 aa		4.62	□□□□□ -1.67
PRE7	YBL041W	SEC16	P48415	2195 aa	Known RBP	4.61	□□□□□ -1.67
PRE7	YBL041W	ARG81	P05085	880 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	SSA3	P09435	649 aa	Known RBP	4.61	□□□□□ -1.67
PRE7	YBL041W	EXO70	P19658	623 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	ERG8	P24521	451 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	CWH43	P25618	953 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	SIP2	P34164	415 aa	Known RBP	4.61	□□□□□ -1.67
PRE7	YBL041W	MRPL17	P36528	281 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	YHR177W	P38867	453 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	GET2	P40056	285 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	ECO1	P43605	281 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	RPE1	P46969	238 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	AAD10	P47182	288 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	RNR4	P49723	345 aa	Known RBP	4.61	□□□□□ -1.67
PRE7	YBL041W	MPA43	P53583	542 aa	Predicted RBP	4.61	□□□□□ -1.67
PRE7	YBL041W	ARC35	P53731	342 aa	Known RBP	4.61	□□□□□ -1.67
PRE7	YBL041W	ARG5,6	Q01217	863 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	YSA1	Q01976	231 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	YML119W	Q03208	357 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	MMT1	Q03218	510 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	PFA5	Q03289	374 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	YDR476C	Q03362	224 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	FMN1	Q03778	218 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	SEI1	Q06058	285 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	COS7	Q07788	383 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	YOL131W	Q08270	108 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	BSC1	Q12140	328 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	RPN6	Q12377	434 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	PSF1	Q12488	208 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	SKS1	Q12505	502 aa		4.61	□□□□□ -1.67
PRE7	YBL041W	BAR1	P12630	587 aa		4.6	□□□□□ -1.67
PRE7	YBL041W	THR1	P17423	357 aa	Known RBP	4.6	□□□□□ -1.67
PRE7	YBL041W	CDC10	P25342	322 aa	Known RBP	4.6	□□□□□ -1.67
PRE7	YBL041W	CTR86	P25355	563 aa		4.6	□□□□□ -1.67
PRE7	YBL041W	RAD14	P28519	371 aa		4.6	□□□□□ -1.67
PRE7	YBL041W	MKK1	P32490	508 aa		4.6	□□□□□ -1.67
PRE7	YBL041W	RPT5	P33297	434 aa	Known RBP	4.6	□□□□□ -1.67
PRE7	YBL041W	YOR062C	P36025	268 aa		4.6	□□□□□ -1.67
PRE7	YBL041W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
PRE7	YBL041W	RGI1	P40043	161 aa	Predicted RBP	4.6	□□□□□ -1.67
PRE7	YBL041W	RIC1	P40395	1056 aa		4.6	□□□□□ -1.67
PRE7	YBL041W	BNA3	P47039	444 aa	Known RBP	4.6	□□□□□ -1.67
PRE7	YBL041W	YGR079W	P53249	370 aa		4.6	□□□□□ -1.67
PRE7	YBL041W	SWP1	Q02795	286 aa		4.6	□□□□□ -1.67
PRE7	YBL041W	YPL107W	Q02873	248 aa		4.6	□□□□□ -1.67
PRE7	YBL041W	PLM2	Q04383	521 aa		4.6	□□□□□ -1.67
PRE7	YBL041W	DCR2	Q05924	578 aa		4.6	□□□□□ -1.67
PRE7	YBL041W	PUT2	P07275	575 aa		4.59	□□□□□ -1.67
PRE7	YBL041W	ARF1	P11076	181 aa	Known RBP	4.59	□□□□□ -1.67
PRE7	YBL041W	ERD1	P16151	362 aa		4.59	□□□□□ -1.67
PRE7	YBL041W	CCA1	P21269	546 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms