RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SEPT1Q8WYJ6 367 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 HHIPL1Q96JK4 782 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 CEP89Q96ST8 783 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 TSG101Q99816 390 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 VTA1Q9NP79 307 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 CYP26B1Q9NR63 512 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 IMPACTQ9P2X3 320 aa19.42■□□□□ 0.7
PHGDH-232ENST00000641947 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.41■□□□□ 0.7
PHGDH-232ENST00000641947 RBM47A0AV96 593 aaKnown RBP19.41■□□□□ 0.7
PHGDH-232ENST00000641947 EIF3DO15371 548 aaKnown RBP eCLIP19.41■□□□□ 0.7
PHGDH-232ENST00000641947 TOMM70O94826 608 aa19.41■□□□□ 0.7
PHGDH-232ENST00000641947 ARHGAP1Q07960 439 aa19.41■□□□□ 0.7
PHGDH-232ENST00000641947 GOLGA8FQ08AF8 430 aa19.41■□□□□ 0.7
PHGDH-232ENST00000641947 GOLGA8DPQ0D2H9 430 aa19.41■□□□□ 0.7
PHGDH-232ENST00000641947 SREBF2Q12772 1141 aa19.41■□□□□ 0.7
PHGDH-232ENST00000641947 MTERF2Q49AM1 385 aa19.41■□□□□ 0.7
PHGDH-232ENST00000641947 MIIPQ5JXC2 388 aa19.41■□□□□ 0.7
PHGDH-232ENST00000641947 OTUD6AQ7L8S5 288 aa19.41■□□□□ 0.7
PHGDH-232ENST00000641947 BSNDQ8WZ55 320 aa19.41■□□□□ 0.7
PHGDH-232ENST00000641947 N4BP3O15049 544 aa19.4■□□□□ 0.7
PHGDH-232ENST00000641947 TGFB1I1O43294 461 aa19.4■□□□□ 0.7
PHGDH-232ENST00000641947 LGR5O75473 907 aa19.4■□□□□ 0.7
PHGDH-232ENST00000641947 KIF20AO95235 890 aa19.4■□□□□ 0.7
PHGDH-232ENST00000641947 TPM3P06753 285 aa19.4■□□□□ 0.7
PHGDH-232ENST00000641947 PLS3P13797 630 aa19.4■□□□□ 0.7
PHGDH-232ENST00000641947 ADCYAP1R1P41586 468 aa19.4■□□□□ 0.7
PHGDH-232ENST00000641947 FAM102BQ5T8I3 360 aa19.4■□□□□ 0.7
PHGDH-232ENST00000641947 CEP135Q66GS9 1140 aa19.4■□□□□ 0.7
PHGDH-232ENST00000641947 DHX37Q8IY37 1157 aaKnown RBP19.4■□□□□ 0.7
PHGDH-232ENST00000641947 SPATA33Q96N06 139 aa19.4■□□□□ 0.7
PHGDH-232ENST00000641947 TINF2Q9BSI4 451 aa19.4■□□□□ 0.7
PHGDH-232ENST00000641947 TUBGCP2Q9BSJ2 902 aa19.4■□□□□ 0.7
PHGDH-232ENST00000641947 FLRT1Q9NZU1 646 aa19.4■□□□□ 0.7
PHGDH-232ENST00000641947 PYCARDQ9ULZ3 195 aa19.4■□□□□ 0.7
PHGDH-232ENST00000641947 TRAF3IP3Q9Y228 551 aa19.4■□□□□ 0.7
PHGDH-232ENST00000641947 ADCY6O43306 1168 aa19.39■□□□□ 0.7
PHGDH-232ENST00000641947 STAT5BP51692 787 aa19.39■□□□□ 0.7
PHGDH-232ENST00000641947 FKBP3Q00688 224 aaKnown RBP19.39■□□□□ 0.7
PHGDH-232ENST00000641947 SPECC1LQ69YQ0 1117 aa19.39■□□□□ 0.7
PHGDH-232ENST00000641947 LRRC8AQ8IWT6 810 aa19.39■□□□□ 0.7
PHGDH-232ENST00000641947 USP6NLQ92738 828 aa19.39■□□□□ 0.7
PHGDH-232ENST00000641947 TIPINQ9BVW5 301 aa19.39■□□□□ 0.7
PHGDH-232ENST00000641947 ZFYVE28Q9HCC9 887 aa19.39■□□□□ 0.7
PHGDH-232ENST00000641947 RRAGDQ9NQL2 400 aaPredicted RBP19.39■□□□□ 0.7
PHGDH-232ENST00000641947 MAGEC2Q9UBF1 373 aaPredicted RBP19.39■□□□□ 0.7
PHGDH-232ENST00000641947 EVPLQ92817 2033 aa19.39■□□□□ 0.69
PHGDH-232ENST00000641947 LGALS16A8MUM7 142 aa19.39■□□□□ 0.69
PHGDH-232ENST00000641947 K7ENM7 598 aa19.39■□□□□ 0.69
PHGDH-232ENST00000641947 PDXKO00764 312 aa19.39■□□□□ 0.69
PHGDH-232ENST00000641947 MAP2K5Q13163 448 aa19.39■□□□□ 0.69
PHGDH-232ENST00000641947 EDRF1Q3B7T1 1238 aa19.39■□□□□ 0.69
PHGDH-232ENST00000641947 FILIP1LQ4L180 1135 aa19.39■□□□□ 0.69
PHGDH-232ENST00000641947 PAXIP1Q6ZW49 1069 aaPredicted RBP19.39■□□□□ 0.69
PHGDH-232ENST00000641947 FAM114A1Q8IWE2 563 aa19.39■□□□□ 0.69
PHGDH-232ENST00000641947 ANKRD20A12PQ8NF67 263 aa19.39■□□□□ 0.69
PHGDH-232ENST00000641947 DRC1Q96MC2 740 aa19.39■□□□□ 0.69
PHGDH-232ENST00000641947 NIFKQ9BYG3 293 aaKnown RBP19.39■□□□□ 0.69
PHGDH-232ENST00000641947 TYW1Q9NV66 732 aaKnown RBP19.39■□□□□ 0.69
PHGDH-232ENST00000641947 UBE4BO95155 1302 aa19.38■□□□□ 0.69
PHGDH-232ENST00000641947 HTTP42858 3142 aa19.38■□□□□ 0.69
PHGDH-232ENST00000641947 AOC2O75106 756 aa19.38■□□□□ 0.69
PHGDH-232ENST00000641947 PRKCSHP14314 528 aaPredicted RBP19.38■□□□□ 0.69
PHGDH-232ENST00000641947 MTIF2P46199 727 aaKnown RBP19.38■□□□□ 0.69
PHGDH-232ENST00000641947 PEX3P56589 373 aa19.38■□□□□ 0.69
PHGDH-232ENST00000641947 TARBP2Q15633 366 aaKnown RBP19.38■□□□□ 0.69
PHGDH-232ENST00000641947 PPP4R3CPQ6ZMV5 832 aa19.38■□□□□ 0.69
PHGDH-232ENST00000641947 KIFC3Q9BVG8 833 aa19.38■□□□□ 0.69
PHGDH-232ENST00000641947 LARSQ9P2J5 1176 aaKnown RBP19.38■□□□□ 0.69
PHGDH-232ENST00000641947 EMSYQ7Z589 1322 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 NOP56O00567 594 aaKnown RBP19.37■□□□□ 0.69
PHGDH-232ENST00000641947 DGAT1O75907 488 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 NCKAP1LP55160 1127 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 CCZ1BP86790 482 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 CCZ1P86791 482 aaPredicted RBP19.37■□□□□ 0.69
PHGDH-232ENST00000641947 CCL14Q16627 93 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 FAM160B1Q5W0V3 765 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 CEP63Q96MT8 703 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 ATP6V0A4Q9HBG4 840 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 ADGRA3Q8IWK6 1321 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 CLIC2O15247 247 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 SLC16A4O15374 487 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 MAPTP10636 758 aaKnown RBP19.37■□□□□ 0.69
PHGDH-232ENST00000641947 NR2F2P24468 414 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 MARK3P27448 753 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 GSDMDP57764 484 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 UBXN1Q04323 297 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 EMC2Q15006 297 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 DHX33Q9H6R0 707 aaKnown RBP19.37■□□□□ 0.69
PHGDH-232ENST00000641947 GJD2Q9UKL4 321 aa19.37■□□□□ 0.69
PHGDH-232ENST00000641947 ZBTB42B2RXF5 422 aa19.36■□□□□ 0.69
PHGDH-232ENST00000641947 CA12O43570 354 aa19.36■□□□□ 0.69
PHGDH-232ENST00000641947 NR3C1P04150 777 aa19.36■□□□□ 0.69
PHGDH-232ENST00000641947 HOXC6P09630 235 aa19.36■□□□□ 0.69
PHGDH-232ENST00000641947 SMPD1P17405 629 aa19.36■□□□□ 0.69
PHGDH-232ENST00000641947 NPTX2P47972 431 aa19.36■□□□□ 0.69
PHGDH-232ENST00000641947 ADAM9Q13443 819 aa19.36■□□□□ 0.69
PHGDH-232ENST00000641947 ACVR2BQ13705 512 aa19.36■□□□□ 0.69
PHGDH-232ENST00000641947 PRAMEF19Q5SWL8 479 aa19.36■□□□□ 0.69
PHGDH-232ENST00000641947 C17orf53Q8N3J3 647 aaPredicted RBP19.36■□□□□ 0.69
PHGDH-232ENST00000641947 NOC4LQ9BVI4 516 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms