RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 TMEM40Q8WWA1 233 aa19.4■□□□□ 0.7
PHGDH-227ENST00000641811 APBB2Q92870 758 aa19.4■□□□□ 0.7
PHGDH-227ENST00000641811 HSD17B14Q9BPX1 270 aa19.4■□□□□ 0.7
PHGDH-227ENST00000641811 ZBED2Q9BTP6 218 aa19.4■□□□□ 0.7
PHGDH-227ENST00000641811 ZSWIM4Q9H7M6 989 aa19.4■□□□□ 0.7
PHGDH-227ENST00000641811 PADI3Q9ULW8 664 aa19.4■□□□□ 0.7
PHGDH-227ENST00000641811 KDM3AQ9Y4C1 1321 aa19.4■□□□□ 0.7
PHGDH-227ENST00000641811 TMEM265A0A087WTH1 108 aa19.39■□□□□ 0.69
PHGDH-227ENST00000641811 A0A087WWV3 80 aa19.39■□□□□ 0.69
PHGDH-227ENST00000641811 TLL1O43897 1013 aa19.39■□□□□ 0.69
PHGDH-227ENST00000641811 DKC1O60832 514 aaKnown RBP eCLIP19.39■□□□□ 0.691e-16■■■■■ 39.7
PHGDH-227ENST00000641811 ARHGEF15O94989 841 aa19.39■□□□□ 0.69
PHGDH-227ENST00000641811 AMHP03971 560 aa19.39■□□□□ 0.69
PHGDH-227ENST00000641811 CA3P07451 260 aa19.39■□□□□ 0.69
PHGDH-227ENST00000641811 TMOD1P28289 359 aa19.39■□□□□ 0.69
PHGDH-227ENST00000641811 NLRP11P59045 1033 aaKnown RBP19.39■□□□□ 0.69
PHGDH-227ENST00000641811 GRIN2CQ14957 1233 aa19.39■□□□□ 0.69
PHGDH-227ENST00000641811 MAP7D2Q96T17 732 aa19.39■□□□□ 0.69
PHGDH-227ENST00000641811 CDX2Q99626 313 aaPredicted RBP19.39■□□□□ 0.69
PHGDH-227ENST00000641811 OSMRQ99650 979 aa19.39■□□□□ 0.69
PHGDH-227ENST00000641811 SLC28A3Q9HAS3 691 aa19.39■□□□□ 0.69
PHGDH-227ENST00000641811 CYP26B1Q9NR63 512 aa19.39■□□□□ 0.69
PHGDH-227ENST00000641811 NOC2LQ9Y3T9 749 aaKnown RBP19.39■□□□□ 0.69
PHGDH-227ENST00000641811 MICAL3Q7RTP6 2002 aa19.39■□□□□ 0.69
PHGDH-227ENST00000641811 IGKV6-21A0A0C4DH24 114 aa19.38■□□□□ 0.69
PHGDH-227ENST00000641811 LCHNA4D1U4 455 aa19.38■□□□□ 0.69
PHGDH-227ENST00000641811 MAFO75444 373 aaPredicted RBP19.38■□□□□ 0.69
PHGDH-227ENST00000641811 UPP2O95045 317 aa19.38■□□□□ 0.69
PHGDH-227ENST00000641811 GJB5O95377 273 aa19.38■□□□□ 0.69
PHGDH-227ENST00000641811 YWHABP31946 246 aaKnown RBP19.38■□□□□ 0.69
PHGDH-227ENST00000641811 PAK2Q13177 524 aa19.38■□□□□ 0.69
PHGDH-227ENST00000641811 PTGDRQ13258 359 aa19.38■□□□□ 0.69
PHGDH-227ENST00000641811 LOXHD1Q8IVV2 1947 aa19.38■□□□□ 0.69
PHGDH-227ENST00000641811 USP38Q8NB14 1042 aa19.38■□□□□ 0.69
PHGDH-227ENST00000641811 LINC01599Q8WXQ3 324 aa19.38■□□□□ 0.69
PHGDH-227ENST00000641811 CEP170P1Q96L14 293 aa19.38■□□□□ 0.69
PHGDH-227ENST00000641811 ADAMTS10Q9H324 1103 aa19.38■□□□□ 0.69
PHGDH-227ENST00000641811 BMP2KQ9NSY1 1161 aaPredicted RBP19.38■□□□□ 0.69
PHGDH-227ENST00000641811 SQORQ9Y6N5 450 aa19.38■□□□□ 0.69
PHGDH-227ENST00000641811 ENPP3O14638 875 aa19.37■□□□□ 0.69
PHGDH-227ENST00000641811 SPATA31C1P0DKV0 1188 aa19.37■□□□□ 0.69
PHGDH-227ENST00000641811 CRYBB1P53674 252 aaPredicted RBP19.37■□□□□ 0.69
PHGDH-227ENST00000641811 NFX1Q12986 1120 aaKnown RBP19.37■□□□□ 0.69
PHGDH-227ENST00000641811 XKR9Q5GH70 373 aa19.37■□□□□ 0.69
PHGDH-227ENST00000641811 PPP2R2DQ66LE6 453 aa19.37■□□□□ 0.69
PHGDH-227ENST00000641811 RTN4RL1Q86UN2 441 aaPredicted RBP19.37■□□□□ 0.69
PHGDH-227ENST00000641811 MYLIPQ8WY64 445 aa19.37■□□□□ 0.69
PHGDH-227ENST00000641811 SNX21Q969T3 373 aa19.37■□□□□ 0.69
PHGDH-227ENST00000641811 TMX1Q9H3N1 280 aa19.37■□□□□ 0.69
PHGDH-227ENST00000641811 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.37■□□□□ 0.69
PHGDH-227ENST00000641811 VPS37CA5D8V6 355 aaPredicted RBP19.36■□□□□ 0.69
PHGDH-227ENST00000641811 MED24O75448 989 aa19.36■□□□□ 0.69
PHGDH-227ENST00000641811 RPS6KA5O75582 802 aa19.36■□□□□ 0.69
PHGDH-227ENST00000641811 LYPLA2O95372 231 aa19.36■□□□□ 0.69
PHGDH-227ENST00000641811 GPC3P51654 580 aa19.36■□□□□ 0.69
PHGDH-227ENST00000641811 RILPL1Q5EBL4 403 aa19.36■□□□□ 0.69
PHGDH-227ENST00000641811 OTUD6AQ7L8S5 288 aa19.36■□□□□ 0.69
PHGDH-227ENST00000641811 SPRED2Q7Z698 418 aa19.36■□□□□ 0.69
PHGDH-227ENST00000641811 FERMT3Q86UX7 667 aa19.36■□□□□ 0.69
PHGDH-227ENST00000641811 NEK9Q8TD19 979 aa19.36■□□□□ 0.69
PHGDH-227ENST00000641811 PIGOQ8TEQ8 1089 aa19.36■□□□□ 0.69
PHGDH-227ENST00000641811 TOP1MTQ969P6 601 aa19.36■□□□□ 0.69
PHGDH-227ENST00000641811 INTS4Q96HW7 963 aaKnown RBP19.36■□□□□ 0.69
PHGDH-227ENST00000641811 RAD9AQ99638 391 aa19.36■□□□□ 0.69
PHGDH-227ENST00000641811 ERVK-5Q9HDB9 667 aa19.36■□□□□ 0.69
PHGDH-227ENST00000641811 SUCLA2Q9P2R7 463 aaPredicted RBP19.36■□□□□ 0.69
PHGDH-227ENST00000641811 MGEA5O60502 916 aa19.35■□□□□ 0.69
PHGDH-227ENST00000641811 DNM2P50570 870 aa19.35■□□□□ 0.69
PHGDH-227ENST00000641811 POLGP54098 1239 aaPredicted RBP19.35■□□□□ 0.69
PHGDH-227ENST00000641811 TAP1Q03518 808 aa19.35■□□□□ 0.69
PHGDH-227ENST00000641811 IL17AQ16552 155 aa19.35■□□□□ 0.69
PHGDH-227ENST00000641811 FAM228AQ86W67 206 aa19.35■□□□□ 0.69
PHGDH-227ENST00000641811 CATSPER3Q86XQ3 398 aa19.35■□□□□ 0.69
PHGDH-227ENST00000641811 TMEM143Q96AN5 459 aa19.35■□□□□ 0.69
PHGDH-227ENST00000641811 SCLT1Q96NL6 688 aa19.35■□□□□ 0.69
PHGDH-227ENST00000641811 PRDM12Q9H4Q4 367 aa19.35■□□□□ 0.69
PHGDH-227ENST00000641811 DHX33Q9H6R0 707 aaKnown RBP19.35■□□□□ 0.69
PHGDH-227ENST00000641811 CERS4Q9HA82 394 aa19.35■□□□□ 0.69
PHGDH-227ENST00000641811 ST3GAL5Q9UNP4 418 aa19.35■□□□□ 0.69
PHGDH-227ENST00000641811 CHD7Q9P2D1 2997 aa19.34■□□□□ 0.69
PHGDH-227ENST00000641811 CSDE1O75534 798 aaKnown RBP19.34■□□□□ 0.69
PHGDH-227ENST00000641811 SYT1P21579 422 aa19.34■□□□□ 0.69
PHGDH-227ENST00000641811 FXR2P51116 673 aaKnown RBP eCLIP19.34■□□□□ 0.691e-6■■■■□ 19.3
PHGDH-227ENST00000641811 RHPN2Q8IUC4 686 aa19.34■□□□□ 0.69
PHGDH-227ENST00000641811 KSR1Q8IVT5 923 aa19.34■□□□□ 0.69
PHGDH-227ENST00000641811 NLRP7Q8WX94 980 aa19.34■□□□□ 0.69
PHGDH-227ENST00000641811 SLC7A3Q8WY07 619 aa19.34■□□□□ 0.69
PHGDH-227ENST00000641811 PDCP20941 246 aa19.33■□□□□ 0.68
PHGDH-227ENST00000641811 IBSPP21815 317 aaPredicted RBP19.33■□□□□ 0.68
PHGDH-227ENST00000641811 FGFR4P22455 802 aa19.33■□□□□ 0.68
PHGDH-227ENST00000641811 RFC5P40937 340 aa19.33■□□□□ 0.68
PHGDH-227ENST00000641811 HTRA4P83105 476 aaPredicted RBP19.33■□□□□ 0.68
PHGDH-227ENST00000641811 EMC2Q15006 297 aa19.33■□□□□ 0.68
PHGDH-227ENST00000641811 POTEGQ6S5H5 508 aa19.33■□□□□ 0.68
PHGDH-227ENST00000641811 JPH2Q9BR39 696 aaPredicted RBP19.33■□□□□ 0.68
PHGDH-227ENST00000641811 POLR3CQ9BUI4 534 aaPredicted RBP19.33■□□□□ 0.68
PHGDH-227ENST00000641811 FTHL17Q9BXU8 183 aa19.33■□□□□ 0.68
PHGDH-227ENST00000641811 TUFT1Q9NNX1 390 aa19.33■□□□□ 0.68
PHGDH-227ENST00000641811 ANKEF1Q9NU02 776 aa19.33■□□□□ 0.68
PHGDH-227ENST00000641811 LRWD1Q9UFC0 647 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms