RNA–Protein interactions for RNA: ENST00000641104.1

MACF1-235, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-235ENST00000641104 LMCD1Q9NZU5 365 aa12.85□□□□□ -0.35
MACF1-235ENST00000641104 USP17L10C9JJH3 530 aa12.85□□□□□ -0.35
MACF1-235ENST00000641104 ADCY2Q08462 1091 aa12.85□□□□□ -0.35
MACF1-235ENST00000641104 KLC3Q6P597 504 aa12.85□□□□□ -0.35
MACF1-235ENST00000641104 MB21D2Q8IYB1 491 aaPredicted RBP12.85□□□□□ -0.35
MACF1-235ENST00000641104 NDUFAF2Q8N183 169 aa12.85□□□□□ -0.35
MACF1-235ENST00000641104 EFHD1Q9BUP0 239 aa12.85□□□□□ -0.35
MACF1-235ENST00000641104 FNDC3AQ9Y2H6 1198 aaKnown RBP12.85□□□□□ -0.35
MACF1-235ENST00000641104 CPDO75976 1380 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 CLGNO14967 610 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 GDAP1Q8TB36 358 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 VPS39Q96JC1 886 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 KLC2Q9H0B6 622 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 LY9Q9HBG7 655 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 CNOT8Q9UFF9 292 aaKnown RBP12.84□□□□□ -0.35
MACF1-235ENST00000641104 NOVA2Q9UNW9 492 aaKnown RBP12.84□□□□□ -0.35
MACF1-235ENST00000641104 GNGT2O14610 69 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 STMN1P16949 149 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 TTC13Q8NBP0 860 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 ZNF526Q8TF50 670 aaPredicted RBP12.84□□□□□ -0.35
MACF1-235ENST00000641104 RNF146Q9NTX7 359 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 SYNGAP1Q96PV0 1343 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 NVLO15381 856 aaKnown RBP12.84□□□□□ -0.35
MACF1-235ENST00000641104 CYP19A1P11511 503 aaPredicted RBP12.84□□□□□ -0.35
MACF1-235ENST00000641104 IL1RL1Q01638 556 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 TFDP2Q14188 446 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 ZNF699Q32M78 642 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 EMBQ6PCB8 327 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 SPDYE1Q8NFV5 336 aaPredicted RBP12.84□□□□□ -0.35
MACF1-235ENST00000641104 PPWD1Q96BP3 646 aaKnown RBP12.84□□□□□ -0.35
MACF1-235ENST00000641104 GINM1Q9NU53 330 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 ANAPC7Q9UJX3 599 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.84□□□□□ -0.35
MACF1-235ENST00000641104 PPME1Q9Y570 386 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 E9PMD0 336 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 CALB1P05937 261 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 P4HBP07237 508 aaKnown RBP12.84□□□□□ -0.35
MACF1-235ENST00000641104 PLS3P13797 630 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 SOX5P35711 763 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 COASYQ13057 564 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 SLC12A1Q13621 1099 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 GLE1Q53GS7 698 aaKnown RBP12.84□□□□□ -0.35
MACF1-235ENST00000641104 SLC27A3Q5K4L6 730 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 ATG16L1Q676U5 607 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 FAF2Q96CS3 445 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 DYDC2Q96IM9 177 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 TTC25Q96NG3 672 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 MTRQ99707 1265 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 TXLNGQ9NUQ3 528 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 ASNSD1Q9NWL6 643 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 PPP1R9AQ9ULJ8 1098 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 STRIP2Q9ULQ0 834 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 OVOS2A0A0G2JMS6 1433 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 OVOS2A0A0J9YW53 1432 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 OVOS2Q6IE36 1432 aa12.84□□□□□ -0.35
MACF1-235ENST00000641104 ZNF568Q3ZCX4 644 aa12.83□□□□□ -0.35
MACF1-235ENST00000641104 RWDD4Q6NW29 188 aaKnown RBP12.83□□□□□ -0.35
MACF1-235ENST00000641104 APOBEC3FQ8IUX4 373 aaKnown RBP12.83□□□□□ -0.35
MACF1-235ENST00000641104 PDCD7Q8N8D1 485 aaKnown RBP12.83□□□□□ -0.35
MACF1-235ENST00000641104 C2orf40Q9H1Z8 148 aa12.83□□□□□ -0.35
MACF1-235ENST00000641104 ZNF302Q9NR11 478 aa12.83□□□□□ -0.35
MACF1-235ENST00000641104 GJB4Q9NTQ9 266 aa12.83□□□□□ -0.35
MACF1-235ENST00000641104 SEL1LQ9UBV2 794 aa12.83□□□□□ -0.35
MACF1-235ENST00000641104 FIS1Q9Y3D6 152 aa12.83□□□□□ -0.35
MACF1-235ENST00000641104 SMIM24O75264 130 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 CHEK2O96017 543 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 PAMP19021 973 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 NOP9Q86U38 636 aaKnown RBP12.83□□□□□ -0.36
MACF1-235ENST00000641104 PSPC1Q8WXF1 523 aaKnown RBP12.83□□□□□ -0.36
MACF1-235ENST00000641104 ORC6Q9Y5N6 252 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 HUS1O60921 280 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 GPC5P78333 572 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 TOGARAM2Q6ZUX3 1019 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 KLHL29Q96CT2 875 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 ISCA1Q9BUE6 129 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 BARHL2Q9NY43 387 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 PLA2R1Q13018 1463 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 PREX2Q70Z35 1606 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 GSTA4O15217 222 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 ZRANB2O95218 330 aaKnown RBP eCLIP12.83□□□□□ -0.36
MACF1-235ENST00000641104 FDX1P10109 184 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 NR1D1P20393 614 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 CA4P22748 312 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 QARSP47897 775 aaKnown RBP12.83□□□□□ -0.36
MACF1-235ENST00000641104 GCLMP48507 274 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 SLC7A5Q01650 507 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 SLFNL1Q499Z3 407 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 PPP6R3Q5H9R7 873 aaPredicted RBP12.83□□□□□ -0.36
MACF1-235ENST00000641104 BEST2Q8NFU1 509 aa12.83□□□□□ -0.36
MACF1-235ENST00000641104 ABCC3O15438 1527 aa12.82□□□□□ -0.36
MACF1-235ENST00000641104 SNAP23O00161 211 aa12.82□□□□□ -0.36
MACF1-235ENST00000641104 SLC16A4O15374 487 aa12.82□□□□□ -0.36
MACF1-235ENST00000641104 NMT2O60551 498 aa12.82□□□□□ -0.36
MACF1-235ENST00000641104 KRT37O76014 449 aa12.82□□□□□ -0.36
MACF1-235ENST00000641104 GPC3P51654 580 aa12.82□□□□□ -0.36
MACF1-235ENST00000641104 TTLL4Q14679 1199 aa12.82□□□□□ -0.36
MACF1-235ENST00000641104 KNOP1Q1ED39 458 aaKnown RBP12.82□□□□□ -0.36
MACF1-235ENST00000641104 ZNF394Q53GI3 561 aa12.82□□□□□ -0.36
MACF1-235ENST00000641104 KRT39Q6A163 491 aa12.82□□□□□ -0.36
MACF1-235ENST00000641104 SLC44A5Q8NCS7 719 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms