RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 ARID2Q68CP9 1835 aa15.71■□□□□ 0.11
LINC00339-211ENST00000641009 GPR182O15218 404 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 MAGEB2O15479 319 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 PSMD10O75832 226 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 IL9P15248 144 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 SFNP31947 248 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 JAK3P52333 1124 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 LINC01465Q8N7H1 131 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 NEK9Q8TD19 979 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 PABPC5Q96DU9 382 aaKnown RBP15.71■□□□□ 0.1
LINC00339-211ENST00000641009 PLVAPQ9BX97 442 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 C22orf23Q9BZE7 217 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 LMAN2LQ9H0V9 348 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 RGS18Q9NS28 235 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 NRBP2Q9NSY0 501 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 TPCN1Q9ULQ1 816 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 PLAGL2Q9UPG8 496 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 PCDHB7Q9Y5E2 793 aa15.71■□□□□ 0.1
LINC00339-211ENST00000641009 CYP3A7-CYP3A51PA0A087WV96 503 aa15.7■□□□□ 0.1
LINC00339-211ENST00000641009 MMP1P03956 469 aa15.7■□□□□ 0.1
LINC00339-211ENST00000641009 CYP3A7P24462 503 aa15.7■□□□□ 0.1
LINC00339-211ENST00000641009 NLRP11P59045 1033 aaKnown RBP15.7■□□□□ 0.1
LINC00339-211ENST00000641009 NONOQ15233 471 aaKnown RBP eCLIP15.7■□□□□ 0.1
LINC00339-211ENST00000641009 INF2Q27J81 1249 aa15.7■□□□□ 0.1
LINC00339-211ENST00000641009 ODR4Q5SWX8 454 aa15.7■□□□□ 0.1
LINC00339-211ENST00000641009 GALNT17Q6IS24 598 aa15.7■□□□□ 0.1
LINC00339-211ENST00000641009 PTCRAQ6ISU1 281 aaPredicted RBP15.7■□□□□ 0.1
LINC00339-211ENST00000641009 KHSRPQ92945 711 aaKnown RBP eCLIP15.7■□□□□ 0.1
LINC00339-211ENST00000641009 P2RX5Q93086 422 aa15.7■□□□□ 0.1
LINC00339-211ENST00000641009 ZNF668Q96K58 619 aaPredicted RBP15.7■□□□□ 0.1
LINC00339-211ENST00000641009 SLKQ9H2G2 1235 aaPredicted RBP15.7■□□□□ 0.1
LINC00339-211ENST00000641009 CD320Q9NPF0 282 aa15.7■□□□□ 0.1
LINC00339-211ENST00000641009 GJB4Q9NTQ9 266 aa15.7■□□□□ 0.1
LINC00339-211ENST00000641009 PPP4R2Q9NY27 417 aa15.7■□□□□ 0.1
LINC00339-211ENST00000641009 CLDND1Q9NY35 253 aa15.7■□□□□ 0.1
LINC00339-211ENST00000641009 C9IYK1 514 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 ITGB1P05556 798 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 DNAJB1P25685 340 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 HYAL1Q12794 435 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 CAMK1Q14012 370 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 COL19A1Q14993 1142 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 FAM102BQ5T8I3 360 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 SLC24A5Q71RS6 500 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 MIER3Q7Z3K6 550 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 KLHL23Q8NBE8 558 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 ETNPPLQ8TBG4 499 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 MBOAT7Q96N66 472 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 MAP7D2Q96T17 732 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 PHF20Q9BVI0 1012 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 ADAMTS10Q9H324 1103 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 EPHX3Q9H6B9 360 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 C1orf112Q9NSG2 853 aa15.69■□□□□ 0.1
LINC00339-211ENST00000641009 DDX25Q9UHL0 483 aaKnown RBP15.69■□□□□ 0.1
LINC00339-211ENST00000641009 TMEM150BA6NC51 233 aa15.68■□□□□ 0.1
LINC00339-211ENST00000641009 GRXCR2A6NFK2 248 aa15.68■□□□□ 0.1
LINC00339-211ENST00000641009 SLC37A4O43826 429 aa15.68■□□□□ 0.1
LINC00339-211ENST00000641009 CDKL5O76039 1030 aa15.68■□□□□ 0.1
LINC00339-211ENST00000641009 COL9A1P20849 921 aa15.68■□□□□ 0.1
LINC00339-211ENST00000641009 TMOD1P28289 359 aa15.68■□□□□ 0.1
LINC00339-211ENST00000641009 GTF2F1P35269 517 aaKnown RBP eCLIP15.68■□□□□ 0.1
LINC00339-211ENST00000641009 LETM2Q2VYF4 491 aa15.68■□□□□ 0.1
LINC00339-211ENST00000641009 MOXD1Q6UVY6 613 aa15.68■□□□□ 0.1
LINC00339-211ENST00000641009 B3GNT9Q6UX72 402 aa15.68■□□□□ 0.1
LINC00339-211ENST00000641009 KRT25Q7Z3Z0 450 aa15.68■□□□□ 0.1
LINC00339-211ENST00000641009 FAM177A1Q8N128 213 aaPredicted RBP15.68■□□□□ 0.1
LINC00339-211ENST00000641009 SPPL3Q8TCT6 385 aa15.68■□□□□ 0.1
LINC00339-211ENST00000641009 SH2D3AQ9BRG2 576 aa15.68■□□□□ 0.1
LINC00339-211ENST00000641009 HCSTQ9UBK5 93 aa15.68■□□□□ 0.1
LINC00339-211ENST00000641009 SEPT9Q9UHD8 586 aaPredicted RBP15.68■□□□□ 0.1
LINC00339-211ENST00000641009 TBKBP1A7MCY6 615 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 PFKFB2O60825 505 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 CTDNEP1O95476 244 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 FGFR1P11362 822 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 LTBRP36941 435 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 GPC3P51654 580 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 TBC1D8BQ0IIM8 1120 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 DRP2Q13474 957 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 DSC3Q14574 896 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 TARBP2Q15633 366 aaKnown RBP15.67■□□□□ 0.1
LINC00339-211ENST00000641009 MTERF2Q49AM1 385 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 NAALADL2Q58DX5 795 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 SPOUT1Q5T280 376 aaKnown RBP15.67■□□□□ 0.1
LINC00339-211ENST00000641009 FAM178BQ8IXR5 827 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 RDM1Q8NG50 284 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 IGFLR1Q9H665 355 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 RAPGEFL1Q9UHV5 662 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 STK36Q9NRP7 1315 aa15.67■□□□□ 0.1
LINC00339-211ENST00000641009 CCDC194A0A1B0GVG4 234 aa15.66■□□□□ 0.1
LINC00339-211ENST00000641009 STBD1O95210 358 aa15.66■□□□□ 0.1
LINC00339-211ENST00000641009 EIF4BP23588 611 aaKnown RBP15.66■□□□□ 0.1
LINC00339-211ENST00000641009 IRS1P35568 1242 aa15.66■□□□□ 0.1
LINC00339-211ENST00000641009 AK2P54819 239 aa15.66■□□□□ 0.1
LINC00339-211ENST00000641009 ANAPC15P60006 121 aa15.66■□□□□ 0.1
LINC00339-211ENST00000641009 DLX2Q07687 328 aaPredicted RBP15.66■□□□□ 0.1
LINC00339-211ENST00000641009 CTC1Q2NKJ3 1217 aa15.66■□□□□ 0.1
LINC00339-211ENST00000641009 FAM43BQ6ZT52 329 aaPredicted RBP15.66■□□□□ 0.1
LINC00339-211ENST00000641009 OXER1Q8TDS5 423 aa15.66■□□□□ 0.1
LINC00339-211ENST00000641009 POF1BQ8WVV4 589 aa15.66■□□□□ 0.1
LINC00339-211ENST00000641009 SCLT1Q96NL6 688 aa15.66■□□□□ 0.1
LINC00339-211ENST00000641009 CEP89Q96ST8 783 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms