RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 CNNM2Q9H8M5 875 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 SFXN1Q9H9B4 322 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 ST3GAL5Q9UNP4 418 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 NOC2LQ9Y3T9 749 aaKnown RBP16.77■□□□□ 0.28
KCNC1-213ENST00000640909 SPTLC1O15269 473 aa16.76■□□□□ 0.27
KCNC1-213ENST00000640909 KINO60870 393 aaKnown RBP16.76■□□□□ 0.27
KCNC1-213ENST00000640909 SLC26A2P50443 739 aa16.76■□□□□ 0.27
KCNC1-213ENST00000640909 PHLDB3Q6NSJ2 640 aa16.76■□□□□ 0.27
KCNC1-213ENST00000640909 MTHFD1LQ6UB35 978 aa16.76■□□□□ 0.27
KCNC1-213ENST00000640909 LRRC55Q6ZSA7 311 aa16.76■□□□□ 0.27
KCNC1-213ENST00000640909 PLPPR4Q7Z2D5 763 aa16.76■□□□□ 0.27
KCNC1-213ENST00000640909 GPR149Q86SP6 731 aa16.76■□□□□ 0.27
KCNC1-213ENST00000640909 PPFIBP1Q86W92 1011 aa16.76■□□□□ 0.27
KCNC1-213ENST00000640909 C1orf210Q8IVY1 113 aa16.76■□□□□ 0.27
KCNC1-213ENST00000640909 SLC39A11Q8N1S5 342 aa16.76■□□□□ 0.27
KCNC1-213ENST00000640909 TMEM87AQ8NBN3 555 aa16.76■□□□□ 0.27
KCNC1-213ENST00000640909 SMARCC2Q8TAQ2 1214 aa16.76■□□□□ 0.27
KCNC1-213ENST00000640909 STK25O00506 426 aa16.75■□□□□ 0.27
KCNC1-213ENST00000640909 ARP10275 920 aa16.75■□□□□ 0.27
KCNC1-213ENST00000640909 ATXN1P54253 815 aaKnown RBP16.75■□□□□ 0.27
KCNC1-213ENST00000640909 LMNB2Q03252 620 aa16.75■□□□□ 0.27
KCNC1-213ENST00000640909 MTMR1Q13613 665 aa16.75■□□□□ 0.27
KCNC1-213ENST00000640909 C15orf39Q6ZRI6 1047 aa16.75■□□□□ 0.27
KCNC1-213ENST00000640909 CABP7Q86V35 215 aa16.75■□□□□ 0.27
KCNC1-213ENST00000640909 DCLK2Q8N568 766 aa16.75■□□□□ 0.27
KCNC1-213ENST00000640909 C12orf76Q8N812 135 aaPredicted RBP16.75■□□□□ 0.27
KCNC1-213ENST00000640909 TMEM40Q8WWA1 233 aa16.75■□□□□ 0.27
KCNC1-213ENST00000640909 RIN2Q8WYP3 895 aaPredicted RBP16.75■□□□□ 0.27
KCNC1-213ENST00000640909 NXPE3Q969Y0 559 aa16.75■□□□□ 0.27
KCNC1-213ENST00000640909 PCYT2Q99447 389 aa16.75■□□□□ 0.27
KCNC1-213ENST00000640909 RTKNQ9BST9 563 aa16.75■□□□□ 0.27
KCNC1-213ENST00000640909 JPH1Q9HDC5 661 aaPredicted RBP16.75■□□□□ 0.27
KCNC1-213ENST00000640909 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.74■□□□□ 0.27
KCNC1-213ENST00000640909 KRBA1A5PL33 1030 aa16.74■□□□□ 0.27
KCNC1-213ENST00000640909 ADRB1P08588 477 aa16.74■□□□□ 0.27
KCNC1-213ENST00000640909 POLGP54098 1239 aaPredicted RBP16.74■□□□□ 0.27
KCNC1-213ENST00000640909 NMIQ13287 307 aaPredicted RBP16.74■□□□□ 0.27
KCNC1-213ENST00000640909 DSC3Q14574 896 aa16.74■□□□□ 0.27
KCNC1-213ENST00000640909 GRM4Q14833 912 aa16.74■□□□□ 0.27
KCNC1-213ENST00000640909 PLCB4Q15147 1175 aa16.74■□□□□ 0.27
KCNC1-213ENST00000640909 SEC23AQ15436 765 aa16.74■□□□□ 0.27
KCNC1-213ENST00000640909 ZNF528Q3MIS6 628 aa16.74■□□□□ 0.27
KCNC1-213ENST00000640909 SLC22A17Q8WUG5 538 aa16.74■□□□□ 0.27
KCNC1-213ENST00000640909 SECISBP2LQ93073 1101 aaKnown RBP16.74■□□□□ 0.27
KCNC1-213ENST00000640909 TMEM169Q96HH4 297 aa16.74■□□□□ 0.27
KCNC1-213ENST00000640909 MRPL9Q9BYD2 267 aaKnown RBP16.74■□□□□ 0.27
KCNC1-213ENST00000640909 ZBP1Q9H171 429 aa16.74■□□□□ 0.27
KCNC1-213ENST00000640909 TBC1D17Q9HA65 648 aa16.74■□□□□ 0.27
KCNC1-213ENST00000640909 DLGAP2Q9P1A6 1054 aa16.74■□□□□ 0.27
KCNC1-213ENST00000640909 CDV3Q9UKY7 258 aaKnown RBP16.74■□□□□ 0.27
KCNC1-213ENST00000640909 GINS2Q9Y248 185 aa16.74■□□□□ 0.27
KCNC1-213ENST00000640909 C2orf16Q68DN1 1984 aa16.74■□□□□ 0.27
KCNC1-213ENST00000640909 COL1A2P08123 1366 aa16.74■□□□□ 0.27
KCNC1-213ENST00000640909 CYTH3O43739 400 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 CXCL14O95715 111 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 CTSAP10619 480 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 SRFP11831 508 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 ITGB5P18084 799 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 PBX3P40426 434 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 CRYBB1P53674 252 aaPredicted RBP16.73■□□□□ 0.27
KCNC1-213ENST00000640909 SLC35G1Q2M3R5 365 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 LETM2Q2VYF4 491 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 VARS2Q5ST30 1063 aaKnown RBP16.73■□□□□ 0.27
KCNC1-213ENST00000640909 FAM228AQ86W67 206 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 TRAPPC12Q8WVT3 735 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 RHOBTB2Q9BYZ6 727 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 RNF19AQ9NV58 838 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 NCDNQ9UBB6 729 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 SLC9A2Q9UBY0 812 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 SIT1Q9Y3P8 196 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 UBIAD1Q9Y5Z9 338 aa16.73■□□□□ 0.27
KCNC1-213ENST00000640909 MEIS2O14770 477 aa16.72■□□□□ 0.27
KCNC1-213ENST00000640909 CFHP08603 1231 aa16.72■□□□□ 0.27
KCNC1-213ENST00000640909 EPCAMP16422 314 aa16.72■□□□□ 0.27
KCNC1-213ENST00000640909 CA8P35219 290 aa16.72■□□□□ 0.27
KCNC1-213ENST00000640909 ALDH7A1P49419 539 aaKnown RBP16.72■□□□□ 0.27
KCNC1-213ENST00000640909 STAT5BP51692 787 aa16.72■□□□□ 0.27
KCNC1-213ENST00000640909 IMMTQ16891 758 aaKnown RBP16.72■□□□□ 0.27
KCNC1-213ENST00000640909 TMC5Q6UXY8 1006 aa16.72■□□□□ 0.27
KCNC1-213ENST00000640909 STK39Q9UEW8 545 aa16.72■□□□□ 0.27
KCNC1-213ENST00000640909 PATJQ8NI35 1801 aa16.71■□□□□ 0.27
KCNC1-213ENST00000640909 NARSO43776 548 aaKnown RBP16.71■□□□□ 0.27
KCNC1-213ENST00000640909 USP17L6PQ6QN14 398 aa16.71■□□□□ 0.27
KCNC1-213ENST00000640909 CYP26C1Q6V0L0 522 aa16.71■□□□□ 0.27
KCNC1-213ENST00000640909 KIAA0319LQ8IZA0 1049 aa16.71■□□□□ 0.27
KCNC1-213ENST00000640909 VPS52Q8N1B4 723 aa16.71■□□□□ 0.27
KCNC1-213ENST00000640909 CMASQ8NFW8 434 aaPredicted RBP16.71■□□□□ 0.27
KCNC1-213ENST00000640909 STAMQ92783 540 aa16.71■□□□□ 0.27
KCNC1-213ENST00000640909 JADE2Q9NQC1 790 aa16.71■□□□□ 0.27
KCNC1-213ENST00000640909 FBXO4Q9UKT5 387 aa16.71■□□□□ 0.27
KCNC1-213ENST00000640909 NFASCO94856 1347 aa16.7■□□□□ 0.26
KCNC1-213ENST00000640909 HBP1O60381 514 aa16.7■□□□□ 0.26
KCNC1-213ENST00000640909 ZSCAN20P17040 1043 aaPredicted RBP16.7■□□□□ 0.26
KCNC1-213ENST00000640909 KLRC1P26715 233 aa16.7■□□□□ 0.26
KCNC1-213ENST00000640909 PDE1AP54750 535 aa16.7■□□□□ 0.26
KCNC1-213ENST00000640909 DDX53Q86TM3 631 aaKnown RBP16.7■□□□□ 0.26
KCNC1-213ENST00000640909 ECHDC2Q86YB7 292 aa16.7■□□□□ 0.26
KCNC1-213ENST00000640909 ZNF710Q8N1W2 664 aa16.7■□□□□ 0.26
KCNC1-213ENST00000640909 CDHR5Q9HBB8 845 aa16.7■□□□□ 0.26
KCNC1-213ENST00000640909 ARHGEF3Q9NR81 526 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms