RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	OSBP	P22059	807 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	NR2F2	P24468	414 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	CCND2	P30279	289 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	NMT1	P30419	496 aa	Known RBP	12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	TM4SF4	P48230	202 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	HERVK_113	P62684	666 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	IRX3	P78415	501 aa	Predicted RBP	12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	PPP2R3A	Q06190	1150 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	MTMR1	Q13613	665 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	SNRNP48	Q6IEG0	339 aa	Known RBP	12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	ZNF720	Q7Z2F6	126 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	PRRT2	Q7Z6L0	340 aa	Predicted RBP	12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	MTERF4	Q7Z6M4	381 aa	Known RBP	12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	CCDC155	Q8N6L0	562 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	DNAJC5G	Q8N7S2	189 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	NEK11	Q8NG66	645 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	PURB	Q96QR8	312 aa	Known RBP	12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	MAP7D2	Q96T17	732 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	PARK7	Q99497	189 aa	Known RBP	12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	EIF3C	Q99613	913 aa	Known RBP	12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	STRA6	Q9BX79	667 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	IRX2	Q9BZI1	471 aa	Predicted RBP	12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	FAM207A	Q9NSI2	230 aa	Predicted RBP	12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	HOXC10	Q9NYD6	342 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	KIAA1217	Q5T5P2	1943 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	LOC285556	D6RIA3	1793 aa		12.38	□□□□□ -0.43
GFAP-238	ENST00000640859	LCT	P09848	1927 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	ATP9A	O75110	1047 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	HIP1R	O75146	1068 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	ABL1	P00519	1130 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	NR3C1	P04150	777 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	NR3C2	P08235	984 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	MAPT	P10636	758 aa	Known RBP	12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	RPL13	P26373	211 aa	Known RBP	12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	QARS	P47897	775 aa	Known RBP	12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	KRT83	P78385	493 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	KCNA1	Q09470	495 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	TAF1C	Q15572	869 aa	Predicted RBP	12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	ARHGAP29	Q52LW3	1261 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	ZNF569	Q5MCW4	686 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	DPY19L2P1	Q6NXN4	242 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	PADI6	Q6TGC4	694 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	ANKRD23	Q86SG2	305 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	IFNL1	Q8IU54	200 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	C4orf19	Q8IY42	314 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	DAW1	Q8N136	415 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	LRRN4CL	Q8ND94	238 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	RDM1	Q8NG50	284 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	GPRASP2	Q96D09	838 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	BORCS6	Q96GS4	357 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	SENP7	Q9BQF6	1050 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	LSM14B	Q9BX40	385 aa	Known RBP	12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	ZFYVE28	Q9HCC9	887 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	METTL14	Q9HCE5	456 aa	Known RBP	12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	DMAC2	Q9NW81	257 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	SAGE1	Q9NXZ1	904 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	CEP72	Q9P209	647 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	MYO1A	Q9UBC5	1043 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	ZMYM2	Q9UBW7	1377 aa		12.37	□□□□□ -0.43
GFAP-238	ENST00000640859	OTOF	Q9HC10	1997 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	MAFG	O15525	162 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	PPP1R37	O75864	691 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	AKAP3	O75969	853 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	CCNE2	O96020	404 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	ERCC3	P19447	782 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	SFN	P31947	248 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	RARRES1	P49788	294 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	JAK3	P52333	1124 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	KRT76	Q01546	638 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	KCNH2	Q12809	1159 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	ARHGEF6	Q15052	776 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	STXBP4	Q6ZWJ1	553 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	RRAGA	Q7L523	313 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	NLRX1	Q86UT6	975 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	SLC35F6	Q8N357	371 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	NSUN6	Q8TEA1	469 aa	Known RBP	12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	GTF3C2	Q8WUA4	911 aa	Predicted RBP	12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	SYN2	Q92777	582 aa	Predicted RBP	12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	KIF12	Q96FN5	646 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	MS4A4A	Q96JQ5	239 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	INPP4A	Q96PE3	977 aa	Predicted RBP	12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	TEX13B	Q9BXU2	312 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	HAUS4	Q9H6D7	363 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	ACAD9	Q9H845	621 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	CYP39A1	Q9NYL5	469 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	ARHGAP20	Q9P2F6	1191 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	ARMCX3	Q9UH62	379 aa	Predicted RBP	12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	AGTPBP1	Q9UPW5	1226 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	SLC45A1	Q9Y2W3	748 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	MRFAP1	Q9Y605	127 aa		12.36	□□□□□ -0.43
GFAP-238	ENST00000640859	CEP350	Q5VT06	3117 aa		12.35	□□□□□ -0.43
GFAP-238	ENST00000640859	TESPA1	A2RU30	521 aa	Predicted RBP	12.35	□□□□□ -0.43
GFAP-238	ENST00000640859	LRRC53	A6NM62	1247 aa		12.35	□□□□□ -0.43
GFAP-238	ENST00000640859	WDR64	B1ANS9	1081 aa		12.35	□□□□□ -0.43
GFAP-238	ENST00000640859	PDHX	O00330	501 aa		12.35	□□□□□ -0.43
GFAP-238	ENST00000640859	CLIC2	O15247	247 aa		12.35	□□□□□ -0.43
GFAP-238	ENST00000640859	RRP9	O43818	475 aa	Known RBP	12.35	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms