RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 LINC01465Q8N7H1 131 aa28.36■■■□□ 2.13
VEGFA-232ENST00000640653 RNF216Q9NWF9 866 aaPredicted RBP28.36■■■□□ 2.13
VEGFA-232ENST00000640653 SEPT9Q9UHD8 586 aaPredicted RBP28.36■■■□□ 2.13
VEGFA-232ENST00000640653 LRFN2Q9ULH4 789 aa28.36■■■□□ 2.13
VEGFA-232ENST00000640653 ST3GAL5Q9UNP4 418 aa28.36■■■□□ 2.13
VEGFA-232ENST00000640653 PRRC2BQ5JSZ5 2229 aaKnown RBP28.35■■■□□ 2.13
VEGFA-232ENST00000640653 DENND3A2RUS2 1198 aa28.35■■■□□ 2.13
VEGFA-232ENST00000640653 TBX3O15119 743 aa28.35■■■□□ 2.13
VEGFA-232ENST00000640653 MARCH6O60337 910 aa28.35■■■□□ 2.13
VEGFA-232ENST00000640653 CTNNB1P35222 781 aa28.35■■■□□ 2.13
VEGFA-232ENST00000640653 PPP2R5CQ13362 524 aa28.35■■■□□ 2.13
VEGFA-232ENST00000640653 TRIM29Q14134 588 aa28.35■■■□□ 2.13
VEGFA-232ENST00000640653 MRPL38Q96DV4 380 aaKnown RBP28.35■■■□□ 2.13
VEGFA-232ENST00000640653 NIFKQ9BYG3 293 aaKnown RBP28.35■■■□□ 2.13
VEGFA-232ENST00000640653 TTC3P53804 2025 aa28.35■■■□□ 2.13
VEGFA-232ENST00000640653 RB1P06400 928 aa28.34■■■□□ 2.13
VEGFA-232ENST00000640653 SARSP49591 514 aaKnown RBP28.34■■■□□ 2.13
VEGFA-232ENST00000640653 NLRP11P59045 1033 aaKnown RBP28.34■■■□□ 2.13
VEGFA-232ENST00000640653 NR5A1Q13285 461 aa28.34■■■□□ 2.13
VEGFA-232ENST00000640653 CRIPAKQ8N1N5 446 aa28.34■■■□□ 2.13
VEGFA-232ENST00000640653 HLA-CQ95604 372 aa28.34■■■□□ 2.13
VEGFA-232ENST00000640653 C1orf112Q9NSG2 853 aa28.34■■■□□ 2.13
VEGFA-232ENST00000640653 LIMCH1Q9UPQ0 1083 aa28.34■■■□□ 2.13
VEGFA-232ENST00000640653 SPTBN5Q9NRC6 3674 aaKnown RBP28.34■■■□□ 2.13
VEGFA-232ENST00000640653 VCANP13611 3396 aa28.33■■■□□ 2.13
VEGFA-232ENST00000640653 C5orf67F2Z3F1 127 aa28.33■■■□□ 2.13
VEGFA-232ENST00000640653 JAK2O60674 1132 aa28.33■■■□□ 2.13
VEGFA-232ENST00000640653 MMP1P03956 469 aa28.33■■■□□ 2.13
VEGFA-232ENST00000640653 BMPR1AP36894 532 aa28.33■■■□□ 2.13
VEGFA-232ENST00000640653 PSMC5P62195 406 aa28.33■■■□□ 2.13
VEGFA-232ENST00000640653 TFF2Q03403 129 aa28.33■■■□□ 2.13
VEGFA-232ENST00000640653 TARBP2Q15633 366 aaKnown RBP28.33■■■□□ 2.13
VEGFA-232ENST00000640653 MTERF2Q49AM1 385 aa28.33■■■□□ 2.13
VEGFA-232ENST00000640653 EARS2Q5JPH6 523 aaKnown RBP28.33■■■□□ 2.13
VEGFA-232ENST00000640653 FAM228AQ86W67 206 aa28.33■■■□□ 2.13
VEGFA-232ENST00000640653 CMTR2Q8IYT2 770 aaKnown RBP28.33■■■□□ 2.13
VEGFA-232ENST00000640653 BANK1Q8NDB2 785 aa28.33■■■□□ 2.13
VEGFA-232ENST00000640653 CLP1Q92989 425 aaKnown RBP28.33■■■□□ 2.13
VEGFA-232ENST00000640653 ADAM2Q99965 735 aa28.33■■■□□ 2.13
VEGFA-232ENST00000640653 VAV3Q9UKW4 847 aa28.33■■■□□ 2.13
VEGFA-232ENST00000640653 WDR81Q562E7 1941 aa28.33■■■□□ 2.13
VEGFA-232ENST00000640653 LOXHD1Q8IVV2 1947 aa28.33■■■□□ 2.13
VEGFA-232ENST00000640653 EVPLQ92817 2033 aa28.33■■■□□ 2.13
VEGFA-232ENST00000640653 RALGAPA2Q2PPJ7 1873 aa28.32■■■□□ 2.12
VEGFA-232ENST00000640653 MGEA5O60502 916 aa28.32■■■□□ 2.12
VEGFA-232ENST00000640653 DKC1O60832 514 aaKnown RBP eCLIP28.32■■■□□ 2.12
VEGFA-232ENST00000640653 TNFRSF25Q93038 417 aa28.32■■■□□ 2.12
VEGFA-232ENST00000640653 C11orf84Q9BUA3 381 aaPredicted RBP28.32■■■□□ 2.12
VEGFA-232ENST00000640653 RGS18Q9NS28 235 aa28.32■■■□□ 2.12
VEGFA-232ENST00000640653 PCDHB7Q9Y5E2 793 aa28.32■■■□□ 2.12
VEGFA-232ENST00000640653 DDX11L8A8MPP1 907 aa28.31■■■□□ 2.12
VEGFA-232ENST00000640653 EML1O00423 815 aa28.31■■■□□ 2.12
VEGFA-232ENST00000640653 BAG4O95429 457 aaKnown RBP28.31■■■□□ 2.12
VEGFA-232ENST00000640653 TIGD5Q53EQ6 642 aa28.31■■■□□ 2.12
VEGFA-232ENST00000640653 SLC24A5Q71RS6 500 aa28.31■■■□□ 2.12
VEGFA-232ENST00000640653 POTEDQ86YR6 584 aa28.31■■■□□ 2.12
VEGFA-232ENST00000640653 SLFN12Q8IYM2 578 aa28.31■■■□□ 2.12
VEGFA-232ENST00000640653 HAS1Q92839 578 aa28.31■■■□□ 2.12
VEGFA-232ENST00000640653 SCLT1Q96NL6 688 aa28.31■■■□□ 2.12
VEGFA-232ENST00000640653 ADAMTS10Q9H324 1103 aa28.31■■■□□ 2.12
VEGFA-232ENST00000640653 NLRC5Q86WI3 1866 aa28.3■■■□□ 2.12
VEGFA-232ENST00000640653 FAM205CA6NFA0 338 aa28.3■■■□□ 2.12
VEGFA-232ENST00000640653 STBD1O95210 358 aa28.3■■■□□ 2.12
VEGFA-232ENST00000640653 LINC00271P0C7V0 271 aa28.3■■■□□ 2.12
VEGFA-232ENST00000640653 IBSPP21815 317 aaPredicted RBP28.3■■■□□ 2.12
VEGFA-232ENST00000640653 EIF4BP23588 611 aaKnown RBP28.3■■■□□ 2.12
VEGFA-232ENST00000640653 QARSP47897 775 aaKnown RBP28.3■■■□□ 2.12
VEGFA-232ENST00000640653 DNM2P50570 870 aa28.3■■■□□ 2.12
VEGFA-232ENST00000640653 GPC3P51654 580 aa28.3■■■□□ 2.12
VEGFA-232ENST00000640653 FOSBP53539 338 aa28.3■■■□□ 2.12
VEGFA-232ENST00000640653 CDC42EP1Q00587 391 aa28.3■■■□□ 2.12
VEGFA-232ENST00000640653 C8orf34Q49A92 452 aa28.3■■■□□ 2.12
VEGFA-232ENST00000640653 DIS3L2Q8IYB7 885 aaKnown RBP28.3■■■□□ 2.12
VEGFA-232ENST00000640653 PLVAPQ9BX97 442 aa28.3■■■□□ 2.12
VEGFA-232ENST00000640653 REV3LO60673 3130 aa28.29■■■□□ 2.12
VEGFA-232ENST00000640653 P4HBP07237 508 aaKnown RBP28.29■■■□□ 2.12
VEGFA-232ENST00000640653 ST3GAL1Q11201 340 aa28.29■■■□□ 2.12
VEGFA-232ENST00000640653 ADAMTS19Q8TE59 1207 aa28.29■■■□□ 2.12
VEGFA-232ENST00000640653 JPH2Q9BR39 696 aaPredicted RBP28.29■■■□□ 2.12
VEGFA-232ENST00000640653 MRPL42Q9Y6G3 142 aaKnown RBP28.29■■■□□ 2.12
VEGFA-232ENST00000640653 TMEM150BA6NC51 233 aa28.28■■■□□ 2.12
VEGFA-232ENST00000640653 BTBD18B2RXH4 712 aa28.28■■■□□ 2.12
VEGFA-232ENST00000640653 EPHA7Q15375 998 aa28.28■■■□□ 2.12
VEGFA-232ENST00000640653 PAN2Q504Q3 1202 aaKnown RBP28.28■■■□□ 2.12
VEGFA-232ENST00000640653 NLRP7Q8WX94 980 aa28.28■■■□□ 2.12
VEGFA-232ENST00000640653 CEP89Q96ST8 783 aa28.28■■■□□ 2.12
VEGFA-232ENST00000640653 LLPHQ9BRT6 129 aaKnown RBP28.28■■■□□ 2.12
VEGFA-232ENST00000640653 LMAN2LQ9H0V9 348 aa28.28■■■□□ 2.12
VEGFA-232ENST00000640653 IGKV6-21A0A0C4DH24 114 aa28.27■■■□□ 2.12
VEGFA-232ENST00000640653 C9IYK1 514 aa28.27■■■□□ 2.12
VEGFA-232ENST00000640653 ANO5Q75V66 913 aa28.27■■■□□ 2.12
VEGFA-232ENST00000640653 CCDC83Q8IWF9 413 aa28.27■■■□□ 2.12
VEGFA-232ENST00000640653 ZSCAN31Q96LW9 406 aaPredicted RBP28.27■■■□□ 2.12
VEGFA-232ENST00000640653 SH2D3AQ9BRG2 576 aa28.27■■■□□ 2.12
VEGFA-232ENST00000640653 MAFO75444 373 aaPredicted RBP28.26■■■□□ 2.11
VEGFA-232ENST00000640653 BMP1P13497 986 aa28.26■■■□□ 2.11
VEGFA-232ENST00000640653 DARSP14868 501 aaKnown RBP28.26■■■□□ 2.11
VEGFA-232ENST00000640653 ZSCAN20P17040 1043 aaPredicted RBP28.26■■■□□ 2.11
VEGFA-232ENST00000640653 KCNQ1P51787 676 aa28.26■■■□□ 2.11
VEGFA-232ENST00000640653 DSC3Q14574 896 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms