RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 NDNQ99608 321 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 PUS7LQ9H0K6 701 aaKnown RBP8.86□□□□□ -0.99
NECAP1-227ENST00000640648 RPAP3Q9H6T3 665 aaPredicted RBP8.86□□□□□ -0.99
NECAP1-227ENST00000640648 GREM2Q9H772 168 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 GALNT8Q9NY28 637 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 SCAF8Q9UPN6 1271 aaKnown RBP8.86□□□□□ -0.99
NECAP1-227ENST00000640648 CDC25AP30304 524 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 GYG1P46976 350 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 COPB1P53618 953 aaKnown RBP8.86□□□□□ -0.99
NECAP1-227ENST00000640648 KLHL30Q0D2K2 578 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 SGSM1Q2NKQ1 1148 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 TOGARAM2Q6ZUX3 1019 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 LRRC49Q8IUZ0 686 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 RIBC1Q8N443 379 aaPredicted RBP8.86□□□□□ -0.99
NECAP1-227ENST00000640648 SDCCAG3Q96C92 435 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 CMTM5Q96DZ9 223 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 FOXP3Q9BZS1 431 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 ROBO2Q9HCK4 1378 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 SOWAHDA6NJG2 315 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 BUB1O43683 1085 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 ATP6V1G1O75348 118 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 TNFRSF8P28908 595 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 CTSWP56202 376 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 EPHA10Q5JZY3 1008 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 PPP1R2P3Q6NXS1 205 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 ARHGAP27Q6ZUM4 889 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 MAPKAPK5Q8IW41 473 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 JADE3Q92613 823 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 APOBEC2Q9Y235 224 aaKnown RBP8.86□□□□□ -0.99
NECAP1-227ENST00000640648 SESN1Q9Y6P5 492 aa8.86□□□□□ -0.99
NECAP1-227ENST00000640648 GSTT1P30711 240 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 HSPA2P54652 639 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 RBL2Q08999 1139 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 ITGB3BPQ13352 177 aaPredicted RBP8.85□□□□□ -0.99
NECAP1-227ENST00000640648 ANKRD42Q8N9B4 389 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 RBM46Q8TBY0 533 aaKnown RBP8.85□□□□□ -0.99
NECAP1-227ENST00000640648 TTC25Q96NG3 672 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 SLC38A10Q9HBR0 1119 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 CDK12Q9NYV4 1490 aaPredicted RBP8.85□□□□□ -0.99
NECAP1-227ENST00000640648 THAP12O43422 761 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 ORC4O43929 436 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 CALB2P22676 271 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 DMPKQ09013 629 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 BTNL9Q6UXG8 535 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 HBS1LQ9Y450 684 aaKnown RBP8.85□□□□□ -0.99
NECAP1-227ENST00000640648 IDH3BO43837 385 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 GGPS1O95749 300 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 MMEL1Q495T6 779 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 GABPB2Q8TAK5 448 aaPredicted RBP8.85□□□□□ -0.99
NECAP1-227ENST00000640648 PRPF31Q8WWY3 499 aaKnown RBP8.85□□□□□ -0.99
NECAP1-227ENST00000640648 OTUD5Q96G74 571 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 RILPQ96NA2 401 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 SMG5Q9UPR3 1016 aaKnown RBP8.85□□□□□ -0.99
NECAP1-227ENST00000640648 RWDD3Q9Y3V2 267 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 USP6P35125 1406 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 A0A1W2PQC6 194 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 FMNL1O95466 1100 aaPredicted RBP8.85□□□□□ -0.99
NECAP1-227ENST00000640648 MINDY2Q8NBR6 621 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 CNKSR1Q969H4 720 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 MRRFQ96E11 262 aaKnown RBP8.85□□□□□ -0.99
NECAP1-227ENST00000640648 ZSCAN10Q96SZ4 725 aaPredicted RBP8.85□□□□□ -0.99
NECAP1-227ENST00000640648 KRT12Q99456 494 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 GOLPH3LQ9H4A5 285 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 THAP9Q9H5L6 903 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 PCDH18Q9HCL0 1135 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 DISC1Q9NRI5 854 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 GIMAP4Q9NUV9 329 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 EMC3Q9P0I2 261 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 KIF1BO60333 1816 aa8.85□□□□□ -0.99
NECAP1-227ENST00000640648 PRR23AA6NEV1 266 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 C16orf96A6NNT2 1141 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 SPOPO43791 374 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 PLCG2P16885 1265 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 ELF3P78545 371 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-227ENST00000640648 RGS21Q2M5E4 152 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 FSCBQ5H9T9 825 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 ARMCX5Q6P1M9 558 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 COL23A1Q86Y22 540 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-227ENST00000640648 ZC3H12CQ9C0D7 883 aaKnown RBP8.84□□□□□ -0.99
NECAP1-227ENST00000640648 SPC25Q9HBM1 224 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 BIN2Q9UBW5 565 aaPredicted RBP8.84□□□□□ -0.99
NECAP1-227ENST00000640648 MID2Q9UJV3 735 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 MAN1B1Q9UKM7 699 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 CPSF1Q10570 1443 aaKnown RBP8.84□□□□□ -0.99
NECAP1-227ENST00000640648 MROH5Q6ZUA9 1318 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 RBM47A0AV96 593 aaKnown RBP8.84□□□□□ -0.99
NECAP1-227ENST00000640648 H3BQF6 201 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 STAM2O75886 525 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 KRT14P02533 472 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 KRT10P13645 584 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 TECP42680 631 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 CALCRLQ16602 461 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 HAUS3Q68CZ6 603 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 LRRC8BQ6P9F7 803 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 RASGRP4Q8TDF6 673 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 MKL1Q969V6 931 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 DNAAF2Q9NVR5 837 aaKnown RBP8.84□□□□□ -0.99
NECAP1-227ENST00000640648 PREX2Q70Z35 1606 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 EVPLLA8MZ36 301 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 GTPBP6O43824 516 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms