RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 B3GNT5Q9BYG0 378 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 CERS4Q9HA82 394 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 GIMAP2Q9UG22 337 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 L1RE1Q9UN81 338 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 MAFKO60675 156 aa8.46□□□□□ -1.06
NECAP1-220ENST00000639841 XPAP23025 273 aaPredicted RBP8.46□□□□□ -1.06
NECAP1-220ENST00000639841 GFRA1P56159 465 aa8.46□□□□□ -1.06
NECAP1-220ENST00000639841 CLUL1Q15846 466 aa8.46□□□□□ -1.06
NECAP1-220ENST00000639841 ANO4Q32M45 955 aa8.46□□□□□ -1.06
NECAP1-220ENST00000639841 BROXQ5VW32 411 aa8.46□□□□□ -1.06
NECAP1-220ENST00000639841 ITPRIPL1Q6GPH6 555 aa8.46□□□□□ -1.06
NECAP1-220ENST00000639841 NYAP1Q6ZVC0 841 aa8.46□□□□□ -1.06
NECAP1-220ENST00000639841 C11orf74Q86VG3 221 aa8.46□□□□□ -1.06
NECAP1-220ENST00000639841 TRIM59Q8IWR1 403 aa8.46□□□□□ -1.06
NECAP1-220ENST00000639841 NUDT16L1Q9BRJ7 211 aaKnown RBP8.46□□□□□ -1.06
NECAP1-220ENST00000639841 RASSF4Q9H2L5 321 aa8.46□□□□□ -1.06
NECAP1-220ENST00000639841 B4GALT6Q9UBX8 382 aa8.46□□□□□ -1.06
NECAP1-220ENST00000639841 PCDHA4Q9UN74 947 aa8.46□□□□□ -1.06
NECAP1-220ENST00000639841 ST20-MTHFSA0A0A6YYL1 179 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 RPS6KA4O75676 772 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 DHRS4L1P0CG22 281 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 RFC4P35249 363 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 RNF144AP50876 292 aaPredicted RBP8.45□□□□□ -1.06
NECAP1-220ENST00000639841 CASP5P51878 434 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 KPNA1P52294 538 aaPredicted RBP8.45□□□□□ -1.06
NECAP1-220ENST00000639841 KRT83P78385 493 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 BLMHQ13867 455 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 RRS1Q15050 365 aaKnown RBP8.45□□□□□ -1.06
NECAP1-220ENST00000639841 AMOTQ4VCS5 1084 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 DCAF15Q66K64 600 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 DARS2Q6PI48 645 aaKnown RBP8.45□□□□□ -1.06
NECAP1-220ENST00000639841 LINC00116Q8NCU8 138 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 ITPKCQ96DU7 683 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 DCAF5Q96JK2 942 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 PIM2Q9P1W9 311 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 CCDC39Q9UFE4 941 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 ZNF652Q9Y2D9 606 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 ZKSCAN5Q9Y2L8 839 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 TMEM98Q9Y2Y6 226 aa8.45□□□□□ -1.06
NECAP1-220ENST00000639841 KPNA5O15131 536 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 TGM5O43548 720 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 VAMP4O75379 141 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 ATP11AP98196 1134 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 ARHGAP27Q6ZUM4 889 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 MAP4K3Q8IVH8 894 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 ZNF687Q8N1G0 1237 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 GPBAR1Q8TDU6 330 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 LMBR1Q8WVP7 490 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 RMDN3Q96TC7 470 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 CEP72Q9P209 647 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 EMC9Q9Y3B6 208 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 PCDHA8Q9Y5H6 950 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 ANKRD18BA2A2Z9 1011 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 PABPN1LA6NDY0 278 aaKnown RBP8.44□□□□□ -1.06
NECAP1-220ENST00000639841 ARIH2O95376 493 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 DDX58O95786 925 aaKnown RBP8.44□□□□□ -1.06
NECAP1-220ENST00000639841 TBX18O95935 607 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 CYP11A1P05108 521 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 ATP1A3P13637 1013 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 RAC2P15153 192 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 PIK3CAP42336 1068 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 MECP2P51608 486 aaKnown RBP8.44□□□□□ -1.06
NECAP1-220ENST00000639841 MAP4K2Q12851 820 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 PLEKHO1Q53GL0 409 aaPredicted RBP8.44□□□□□ -1.06
NECAP1-220ENST00000639841 CCDC30Q5VVM6 783 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 CCDC129Q6ZRS4 1044 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 USHBP1Q8N6Y0 703 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 DNAJC5GQ8N7S2 189 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 TMEM145Q8NBT3 493 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 KCTD13Q8WZ19 329 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 CENPIQ92674 756 aaPredicted RBP8.44□□□□□ -1.06
NECAP1-220ENST00000639841 BRF1Q92994 677 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 DHRS1Q96LJ7 313 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 TRERF1Q96PN7 1200 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 POP1Q99575 1024 aaKnown RBP8.44□□□□□ -1.06
NECAP1-220ENST00000639841 LMAN2LQ9H0V9 348 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 TRIT1Q9H3H1 467 aaKnown RBP8.44□□□□□ -1.06
NECAP1-220ENST00000639841 UBN1Q9NPG3 1134 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 HELLSQ9NRZ9 838 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 CCM2LQ9NUG4 571 aaPredicted RBP8.44□□□□□ -1.06
NECAP1-220ENST00000639841 GRHPRQ9UBQ7 328 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 SERPINB13Q9UIV8 391 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 COQ6Q9Y2Z9 468 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 TACC3Q9Y6A5 838 aa8.44□□□□□ -1.06
NECAP1-220ENST00000639841 N4BP2Q86UW6 1770 aaPredicted RBP8.44□□□□□ -1.06
NECAP1-220ENST00000639841 C19orf81C9J6K1 198 aa8.43□□□□□ -1.06
NECAP1-220ENST00000639841 H3BML4 177 aa8.43□□□□□ -1.06
NECAP1-220ENST00000639841 B3GALT2O43825 422 aa8.43□□□□□ -1.06
NECAP1-220ENST00000639841 HNRNPCP07910 306 aaKnown RBP eCLIP8.43□□□□□ -1.06
NECAP1-220ENST00000639841 MSX1P28360 303 aa8.43□□□□□ -1.06
NECAP1-220ENST00000639841 ELF1P32519 619 aa8.43□□□□□ -1.06
NECAP1-220ENST00000639841 OCRLQ01968 901 aa8.43□□□□□ -1.06
NECAP1-220ENST00000639841 ICA1Q05084 483 aa8.43□□□□□ -1.06
NECAP1-220ENST00000639841 PRSS53Q2L4Q9 553 aa8.43□□□□□ -1.06
NECAP1-220ENST00000639841 FKBP15Q5T1M5 1219 aa8.43□□□□□ -1.06
NECAP1-220ENST00000639841 RNF220Q5VTB9 566 aa8.43□□□□□ -1.06
NECAP1-220ENST00000639841 IZUMO3Q5VZ72 239 aa8.43□□□□□ -1.06
NECAP1-220ENST00000639841 STYK1Q6J9G0 422 aa8.43□□□□□ -1.06
NECAP1-220ENST00000639841 KCNT2Q6UVM3 1135 aa8.43□□□□□ -1.06
NECAP1-220ENST00000639841 VN1R5Q7Z5H4 357 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms