RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 CYLC2Q14093 348 aaPredicted RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 SF3B3Q15393 1217 aaKnown RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 SBK1Q52WX2 424 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 ST13P4Q8IZP2 240 aaPredicted RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 FAM133AQ8N9E0 248 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 CXorf38Q8TB03 319 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 MGARPQ8TDB4 240 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 SH3GL2Q99962 352 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 CCDC77Q9BR77 488 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 LRRC1Q9BTT6 524 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 UBE2OQ9C0C9 1292 aaKnown RBP6.12□□□□□ -1.43
SCARB2-218ENST00000639715 PIDD1Q9HB75 910 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 NLRC4Q9NPP4 1024 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 MRGBPQ9NV56 204 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 PRELID1Q9Y255 219 aa6.12□□□□□ -1.43
SCARB2-218ENST00000639715 A0A0G2JLW4 131 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 PVALEFA0A1B0GWK0 134 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 SNAP23O00161 211 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 FOXN1O15353 648 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 PDE5AO76074 875 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 USP17L8P0C7I0 530 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 XRCC5P13010 732 aaKnown RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 PLCG1P19174 1290 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 RASSF2P50749 326 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 ZNF131P52739 623 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 ARPC4P59998 168 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 GRM4Q14833 912 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 MYBPC3Q14896 1274 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 RAD9BQ6WBX8 426 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 TRPM8Q7Z2W7 1104 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 GPBP1Q86WP2 473 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 PDCD7Q8N8D1 485 aaKnown RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 RASGRP4Q8TDF6 673 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 TBCKQ8TEA7 893 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 PRCCQ92733 491 aaPredicted RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 MMTAG2Q9BU76 263 aaKnown RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 ETNK1Q9HBU6 452 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 ARHGEF10LQ9HCE6 1279 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 EPB41L4AQ9HCS5 686 aaPredicted RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 WDR35Q9P2L0 1181 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 DDX25Q9UHL0 483 aaKnown RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 SATB2Q9UPW6 733 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 ATP8A1Q9Y2Q0 1164 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 MROH7-TTC4A0A0A0MT08 1334 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 TRIM43BA6NCK2 446 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 CXCR5P32302 372 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 NEK2P51955 445 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 CACNA2D1P54289 1103 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 EIF6P56537 245 aaKnown RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 MAGOHP61326 146 aaKnown RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 MYBPC2Q14324 1141 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 HSP90AA5PQ58FG0 334 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 MAGOHBQ96A72 148 aaKnown RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 CATSPER2Q96P56 530 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 MAP3K14Q99558 947 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 LSM14BQ9BX40 385 aaKnown RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 OSBPL7Q9BZF2 842 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 CCSER1Q9C0I3 900 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 EBF2Q9HAK2 575 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 USP40Q9NVE5 1235 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 ADD3Q9UEY8 706 aaKnown RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 ESYT3A0FGR9 886 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 NVLO15381 856 aaKnown RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 TEX33O43247 280 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 MAP3K7O43318 606 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 RPS6KA4O75676 772 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 NPTXRO95502 500 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 ATP1A1P05023 1023 aaKnown RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 UBTFL6P0CB48 400 aaPredicted RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 GHRP10912 638 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 CDC25AP30304 524 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 ALDH1B1P30837 517 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 PCYT1AP49585 367 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 ADARP55265 1226 aaKnown RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 GTF2IP78347 998 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 DPYDQ12882 1025 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 PEX26Q7Z412 305 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 PHLDB2Q86SQ0 1253 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 NELFCDQ8IXH7 590 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 PRPF31Q8WWY3 499 aaKnown RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 MCUR1Q96AQ8 359 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 FAM84BQ96KN1 310 aaPredicted RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 ANKRD27Q96NW4 1050 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 NDST4Q9H3R1 872 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 NHEJ1Q9H9Q4 299 aaPredicted RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 PDP2Q9P2J9 529 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 NARFQ9UHQ1 456 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 GDAQ9Y2T3 454 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 UTP11Q9Y3A2 253 aaKnown RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 COL4A3BPQ9Y5P4 624 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 XRN1Q8IZH2 1706 aaKnown RBP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 DKC1O60832 514 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 TTLL1O95922 423 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 ZCCHC18P0CG32 403 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 STAT1P42224 750 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 PRCPP42785 496 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 FMR1Q06787 632 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCARB2-218ENST00000639715 ADAM9Q13443 819 aa6.11□□□□□ -1.43
SCARB2-218ENST00000639715 C10orf76Q5T2E6 689 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms