RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 NR1H3Q13133 447 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 CHMP6Q96FZ7 201 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 MSTO1Q9BUK6 570 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 DCTN4Q9UJW0 460 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 KRT10P13645 584 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 GUCY1A3Q02108 690 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 RGS9BPQ6ZS82 235 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 DGKHQ86XP1 1220 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 SPC25Q9HBM1 224 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 ADAM22Q9P0K1 906 aa19.8■□□□□ 0.76
SCARB2-213ENST00000638680 H7C1W4 665 aa19.79■□□□□ 0.76
SCARB2-213ENST00000638680 NBPF10Q6P3W6 841 aaKnown RBP19.79■□□□□ 0.76
SCARB2-213ENST00000638680 RPAP1Q9BWH6 1393 aaPredicted RBP19.79■□□□□ 0.76
SCARB2-213ENST00000638680 HEG1Q9ULI3 1381 aa19.79■□□□□ 0.76
SCARB2-213ENST00000638680 UGGT1Q9NYU2 1555 aa19.79■□□□□ 0.76
SCARB2-213ENST00000638680 ZNF233A6NK53 670 aa19.79■□□□□ 0.76
SCARB2-213ENST00000638680 ZNF18P17022 549 aa19.79■□□□□ 0.76
SCARB2-213ENST00000638680 CAV1Q03135 178 aa19.79■□□□□ 0.76
SCARB2-213ENST00000638680 DPF2Q92785 391 aa19.79■□□□□ 0.76
SCARB2-213ENST00000638680 KLC2Q9H0B6 622 aa19.79■□□□□ 0.76
SCARB2-213ENST00000638680 E9PMD0 336 aa19.79■□□□□ 0.76
SCARB2-213ENST00000638680 CYP2D6P10635 497 aa19.79■□□□□ 0.76
SCARB2-213ENST00000638680 RBM41Q96IZ5 413 aaKnown RBP19.79■□□□□ 0.76
SCARB2-213ENST00000638680 INPP5FQ9Y2H2 1132 aa19.79■□□□□ 0.76
SCARB2-213ENST00000638680 NOC2LQ9Y3T9 749 aaKnown RBP19.79■□□□□ 0.76
SCARB2-213ENST00000638680 CCDC195A0A1B0GUA6 201 aa19.79■□□□□ 0.76
SCARB2-213ENST00000638680 TARSL2A2RTX5 802 aaKnown RBP19.79■□□□□ 0.76
SCARB2-213ENST00000638680 BRAFP15056 766 aa19.79■□□□□ 0.76
SCARB2-213ENST00000638680 TRIM15Q9C019 465 aa19.79■□□□□ 0.76
SCARB2-213ENST00000638680 TTC7AQ9ULT0 858 aaPredicted RBP19.79■□□□□ 0.76
SCARB2-213ENST00000638680 ZRANB2O95218 330 aaKnown RBP eCLIP19.78■□□□□ 0.76
SCARB2-213ENST00000638680 CHGBP05060 677 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 KLC4Q9NSK0 619 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 FBXL5Q9UKA1 691 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 WDR64B1ANS9 1081 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 PSAPP07602 524 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 MYO1EQ12965 1108 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 PASD1Q8IV76 773 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 TTLL11Q8NHH1 800 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 CCDC124Q96CT7 223 aaKnown RBP19.78■□□□□ 0.76
SCARB2-213ENST00000638680 FNDC3AQ9Y2H6 1198 aaKnown RBP19.78■□□□□ 0.76
SCARB2-213ENST00000638680 UBN2Q6ZU65 1347 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 PLEKHG1Q9ULL1 1385 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 APBA3O96018 575 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 DEUP1Q05D60 604 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 TMEM259Q4ZIN3 620 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 ETNK1Q9HBU6 452 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 LRRC4Q9HBW1 653 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 USP21Q9UK80 565 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 HSPA8P11142 646 aaKnown RBP19.78■□□□□ 0.76
SCARB2-213ENST00000638680 GCLMP48507 274 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 TBC1D9BQ66K14 1250 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 WDR19Q8NEZ3 1342 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 CYP2E1P05181 493 aaPredicted RBP19.78■□□□□ 0.76
SCARB2-213ENST00000638680 EXT2Q93063 718 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 TTC25Q96NG3 672 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 NUP85Q9BW27 656 aa19.78■□□□□ 0.76
SCARB2-213ENST00000638680 ARHGAP31Q2M1Z3 1444 aa19.77■□□□□ 0.76
SCARB2-213ENST00000638680 USP17L5A8MUK1 530 aa19.77■□□□□ 0.76
SCARB2-213ENST00000638680 KIF19Q2TAC6 998 aa19.77■□□□□ 0.76
SCARB2-213ENST00000638680 FBXL13Q8NEE6 735 aa19.77■□□□□ 0.76
SCARB2-213ENST00000638680 DBNDD1Q9H9R9 158 aa19.77■□□□□ 0.76
SCARB2-213ENST00000638680 PVALEFA0A1B0GWK0 134 aa19.77■□□□□ 0.76
SCARB2-213ENST00000638680 PI4K2BG5E9Z4 385 aa19.77■□□□□ 0.76
SCARB2-213ENST00000638680 CDR2Q01850 454 aa19.77■□□□□ 0.76
SCARB2-213ENST00000638680 ZNF564Q8TBZ8 553 aaPredicted RBP19.77■□□□□ 0.76
SCARB2-213ENST00000638680 PPP1R16BQ96T49 567 aa19.77■□□□□ 0.76
SCARB2-213ENST00000638680 PBRM1Q86U86 1689 aa19.77■□□□□ 0.76
SCARB2-213ENST00000638680 NMT2O60551 498 aa19.77■□□□□ 0.76
SCARB2-213ENST00000638680 KCTD2Q14681 263 aa19.77■□□□□ 0.76
SCARB2-213ENST00000638680 KLHL38Q2WGJ6 581 aa19.77■□□□□ 0.76
SCARB2-213ENST00000638680 SIX6OS1Q8N1H7 587 aa19.77■□□□□ 0.76
SCARB2-213ENST00000638680 KLC3Q6P597 504 aa19.77■□□□□ 0.75
SCARB2-213ENST00000638680 MXD3Q9BW11 206 aa19.77■□□□□ 0.75
SCARB2-213ENST00000638680 OSBPL1AQ9BXW6 950 aa19.77■□□□□ 0.75
SCARB2-213ENST00000638680 CREB3O43889 395 aa19.77■□□□□ 0.75
SCARB2-213ENST00000638680 CHRNA3P32297 505 aa19.77■□□□□ 0.75
SCARB2-213ENST00000638680 NOP14P78316 857 aaKnown RBP19.77■□□□□ 0.75
SCARB2-213ENST00000638680 CCZ1BP86790 482 aa19.77■□□□□ 0.75
SCARB2-213ENST00000638680 CCZ1P86791 482 aaPredicted RBP19.77■□□□□ 0.75
SCARB2-213ENST00000638680 TXNRD1Q16881 649 aa19.77■□□□□ 0.75
SCARB2-213ENST00000638680 FSCBQ5H9T9 825 aa19.77■□□□□ 0.75
SCARB2-213ENST00000638680 CPVLQ9H3G5 476 aa19.77■□□□□ 0.75
SCARB2-213ENST00000638680 MCF2P10911 925 aa19.76■□□□□ 0.75
SCARB2-213ENST00000638680 YWHAHQ04917 246 aaPredicted RBP19.76■□□□□ 0.75
SCARB2-213ENST00000638680 ZNF394Q53GI3 561 aa19.76■□□□□ 0.75
SCARB2-213ENST00000638680 KRT38O76015 456 aa19.76■□□□□ 0.75
SCARB2-213ENST00000638680 RAD23BP54727 409 aa19.76■□□□□ 0.75
SCARB2-213ENST00000638680 SH3RF3Q8TEJ3 882 aaPredicted RBP19.76■□□□□ 0.75
SCARB2-213ENST00000638680 KIF2CQ99661 725 aa19.76■□□□□ 0.75
SCARB2-213ENST00000638680 LRRC1Q9BTT6 524 aa19.76■□□□□ 0.75
SCARB2-213ENST00000638680 PP2D1A8MPX8 630 aa19.76■□□□□ 0.75
SCARB2-213ENST00000638680 SRLQ86TD4 932 aa19.76■□□□□ 0.75
SCARB2-213ENST00000638680 CALR3Q96L12 384 aaKnown RBP19.76■□□□□ 0.75
SCARB2-213ENST00000638680 DHX36Q9H2U1 1008 aaKnown RBP19.76■□□□□ 0.75
SCARB2-213ENST00000638680 CAPN11Q9UMQ6 739 aa19.76■□□□□ 0.75
SCARB2-213ENST00000638680 ZNF185O15231 689 aa19.76■□□□□ 0.75
SCARB2-213ENST00000638680 TAF1BQ53T94 588 aaPredicted RBP19.76■□□□□ 0.75
SCARB2-213ENST00000638680 PPP6R3Q5H9R7 873 aaPredicted RBP19.76■□□□□ 0.75
SCARB2-213ENST00000638680 E4F1Q66K89 784 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms