RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 PWP2Q15269 919 aaKnown RBP23.9■■□□□ 1.42
SCARB2-212ENST00000638663 FAM110CQ1W6H9 321 aa23.9■■□□□ 1.42
SCARB2-212ENST00000638663 XKR3Q5GH77 459 aa23.9■■□□□ 1.42
SCARB2-212ENST00000638663 ARMCX2Q7L311 632 aa23.9■■□□□ 1.42
SCARB2-212ENST00000638663 SAPCD2Q86UD0 394 aa23.9■■□□□ 1.42
SCARB2-212ENST00000638663 CLIC2O15247 247 aa23.89■■□□□ 1.42
SCARB2-212ENST00000638663 STRNO43815 780 aa23.89■■□□□ 1.42
SCARB2-212ENST00000638663 TPM1P09493 284 aa23.89■■□□□ 1.42
SCARB2-212ENST00000638663 ATP4AP20648 1035 aa23.89■■□□□ 1.42
SCARB2-212ENST00000638663 FKBP15Q5T1M5 1219 aa23.89■■□□□ 1.42
SCARB2-212ENST00000638663 GPR142Q7Z601 462 aa23.89■■□□□ 1.42
SCARB2-212ENST00000638663 ABRAQ8N0Z2 381 aa23.89■■□□□ 1.42
SCARB2-212ENST00000638663 STRA6Q9BX79 667 aa23.89■■□□□ 1.42
SCARB2-212ENST00000638663 CYP26B1Q9NR63 512 aa23.89■■□□□ 1.42
SCARB2-212ENST00000638663 IGKV6D-21A0A0A0MT36 114 aa23.88■■□□□ 1.41
SCARB2-212ENST00000638663 IGF2BP3O00425 579 aaKnown RBP eCLIP23.88■■□□□ 1.41
SCARB2-212ENST00000638663 MFAP3LO75121 409 aa23.88■■□□□ 1.41
SCARB2-212ENST00000638663 PPP1R37O75864 691 aa23.88■■□□□ 1.41
SCARB2-212ENST00000638663 NR3C1P04150 777 aa23.88■■□□□ 1.41
SCARB2-212ENST00000638663 TRIM14Q14142 442 aa23.88■■□□□ 1.41
SCARB2-212ENST00000638663 SYCP1Q15431 976 aa23.88■■□□□ 1.41
SCARB2-212ENST00000638663 RGMBQ6NW40 437 aa23.88■■□□□ 1.41
SCARB2-212ENST00000638663 TMEM139Q8IV31 216 aa23.88■■□□□ 1.41
SCARB2-212ENST00000638663 PCYT2Q99447 389 aa23.88■■□□□ 1.41
SCARB2-212ENST00000638663 PDGFCQ9NRA1 345 aa23.88■■□□□ 1.41
SCARB2-212ENST00000638663 MYH9P35579 1960 aaKnown RBP23.88■■□□□ 1.41
SCARB2-212ENST00000638663 OATP04181 439 aa23.88■■□□□ 1.41
SCARB2-212ENST00000638663 PEX3P56589 373 aa23.88■■□□□ 1.41
SCARB2-212ENST00000638663 MTERF2Q49AM1 385 aa23.88■■□□□ 1.41
SCARB2-212ENST00000638663 CELF3Q5SZQ8 465 aaKnown RBP23.88■■□□□ 1.41
SCARB2-212ENST00000638663 SEPT1Q8WYJ6 367 aa23.88■■□□□ 1.41
SCARB2-212ENST00000638663 BAG1Q99933 345 aaPredicted RBP23.88■■□□□ 1.41
SCARB2-212ENST00000638663 CPA4Q9UI42 421 aa23.88■■□□□ 1.41
SCARB2-212ENST00000638663 MANSC4A6NHS7 340 aaPredicted RBP23.87■■□□□ 1.41
SCARB2-212ENST00000638663 RNF225M0QZC1 329 aaPredicted RBP23.87■■□□□ 1.41
SCARB2-212ENST00000638663 MAPTP10636 758 aaKnown RBP23.87■■□□□ 1.41
SCARB2-212ENST00000638663 TCF7P36402 384 aaPredicted RBP23.87■■□□□ 1.41
SCARB2-212ENST00000638663 KLK7P49862 253 aa23.87■■□□□ 1.41
SCARB2-212ENST00000638663 MARSP56192 900 aaKnown RBP23.87■■□□□ 1.41
SCARB2-212ENST00000638663 SOX10P56693 466 aa23.87■■□□□ 1.41
SCARB2-212ENST00000638663 CCDC62Q6P9F0 684 aa23.87■■□□□ 1.41
SCARB2-212ENST00000638663 CNGA4Q8IV77 575 aa23.87■■□□□ 1.41
SCARB2-212ENST00000638663 PANX2Q96RD6 677 aa23.87■■□□□ 1.41
SCARB2-212ENST00000638663 DGAT1O75907 488 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 TXNP10599 105 aaKnown RBP23.86■■□□□ 1.41
SCARB2-212ENST00000638663 RPL13P26373 211 aaKnown RBP23.86■■□□□ 1.41
SCARB2-212ENST00000638663 TMEM63BQ5T3F8 832 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 TRIM59Q8IWR1 403 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 COPS5Q92905 334 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 PCMTD1Q96MG8 357 aaPredicted RBP23.86■■□□□ 1.41
SCARB2-212ENST00000638663 ERGIC2Q96RQ1 377 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 ARID2Q68CP9 1835 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 SLC16A4O15374 487 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 HSDL1Q3SXM5 330 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 FAM160B1Q5W0V3 765 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 PLEKHH3Q7Z736 793 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 DPP9Q86TI2 863 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 DHX37Q8IY37 1157 aaKnown RBP23.86■■□□□ 1.41
SCARB2-212ENST00000638663 SYCP3Q8IZU3 236 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 GBP3Q9H0R5 595 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 PDLIM7Q9NR12 457 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 PLXNA1Q9UIW2 1896 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 PASKQ96RG2 1323 aa23.86■■□□□ 1.41
SCARB2-212ENST00000638663 MAPK4P31152 587 aa23.85■■□□□ 1.41
SCARB2-212ENST00000638663 STAT5BP51692 787 aa23.85■■□□□ 1.41
SCARB2-212ENST00000638663 ALCAMQ13740 583 aa23.85■■□□□ 1.41
SCARB2-212ENST00000638663 GRB14Q14449 540 aa23.85■■□□□ 1.41
SCARB2-212ENST00000638663 TTLL4Q14679 1199 aa23.85■■□□□ 1.41
SCARB2-212ENST00000638663 HS2ST1Q7LGA3 356 aa23.85■■□□□ 1.41
SCARB2-212ENST00000638663 HAUS6Q7Z4H7 955 aa23.85■■□□□ 1.41
SCARB2-212ENST00000638663 KIFAP3Q92845 792 aa23.85■■□□□ 1.41
SCARB2-212ENST00000638663 GPR20Q99678 358 aa23.85■■□□□ 1.41
SCARB2-212ENST00000638663 ATP6V0A4Q9HBG4 840 aa23.85■■□□□ 1.41
SCARB2-212ENST00000638663 XPNPEP1Q9NQW7 623 aa23.85■■□□□ 1.41
SCARB2-212ENST00000638663 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.85■■□□□ 1.41
SCARB2-212ENST00000638663 TTC26A0AVF1 554 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 USP27XA6NNY8 438 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 NOP56O00567 594 aaKnown RBP23.84■■□□□ 1.41
SCARB2-212ENST00000638663 STX10O60499 249 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 AKAP3O75969 853 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 ECM2O94769 699 aaPredicted RBP23.84■■□□□ 1.41
SCARB2-212ENST00000638663 CASP4P49662 377 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 TAF1CQ15572 869 aaPredicted RBP23.84■■□□□ 1.41
SCARB2-212ENST00000638663 MCPH1Q8NEM0 835 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 SCFD2Q8WU76 684 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 SPATA33Q96N06 139 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 RASSF10A6NK89 507 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 CCDC169A6NNP5 214 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 NCKAP1LP55160 1127 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 E4F1Q66K89 784 aaPredicted RBP23.84■■□□□ 1.41
SCARB2-212ENST00000638663 FRMD5Q7Z6J6 570 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 CCDC155Q8N6L0 562 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 AFAP1L1Q8TED9 768 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 BSNDQ8WZ55 320 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 AGPAT3Q9NRZ7 376 aa23.84■■□□□ 1.41
SCARB2-212ENST00000638663 TRMT1Q9NXH9 659 aaKnown RBP23.84■■□□□ 1.41
SCARB2-212ENST00000638663 ARMCX3Q9UH62 379 aaPredicted RBP23.84■■□□□ 1.41
SCARB2-212ENST00000638663 ARHGAP6O43182 974 aa23.83■■□□□ 1.41
SCARB2-212ENST00000638663 SLC10A3P09131 477 aa23.83■■□□□ 1.41
SCARB2-212ENST00000638663 TRIM21P19474 475 aaKnown RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms