RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 VPS37CA5D8V6 355 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 POTEMA6NI47 508 aa16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 YWHABP31946 246 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 POLGP54098 1239 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 ORC2Q13416 577 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 GRIN2CQ14957 1233 aa16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 XKR9Q5GH70 373 aa16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 ODR4Q5SWX8 454 aa16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 ERMNQ8TAM6 284 aa16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 SLC7A3Q8WY07 619 aa16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 YME1L1Q96TA2 773 aa16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 CDX2Q99626 313 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 JPH2Q9BR39 696 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 TMEM60Q9H2L4 133 aa16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 PRDM12Q9H4Q4 367 aa16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 ZSWIM4Q9H7M6 989 aa16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 CERS4Q9HA82 394 aa16.13■□□□□ 0.17
CACNA1A-249ENST00000637777 DENND3A2RUS2 1198 aa16.12■□□□□ 0.17
CACNA1A-249ENST00000637777 GJB5O95377 273 aa16.12■□□□□ 0.17
CACNA1A-249ENST00000637777 HSP90AA1P07900 732 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-249ENST00000637777 U2AF2P26368 475 aaKnown RBP eCLIP16.12■□□□□ 0.17
CACNA1A-249ENST00000637777 TECP42680 631 aa16.12■□□□□ 0.17
CACNA1A-249ENST00000637777 NPEPPSP55786 919 aa16.12■□□□□ 0.17
CACNA1A-249ENST00000637777 NLRP11P59045 1033 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-249ENST00000637777 HSCBQ8IWL3 235 aa16.12■□□□□ 0.17
CACNA1A-249ENST00000637777 NEK9Q8TD19 979 aa16.12■□□□□ 0.17
CACNA1A-249ENST00000637777 FTHL17Q9BXU8 183 aa16.12■□□□□ 0.17
CACNA1A-249ENST00000637777 NIFKQ9BYG3 293 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-249ENST00000637777 AGO3Q9H9G7 860 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-249ENST00000637777 CYP26B1Q9NR63 512 aa16.12■□□□□ 0.17
CACNA1A-249ENST00000637777 MTUS1Q9ULD2 1270 aa16.12■□□□□ 0.17
CACNA1A-249ENST00000637777 PADI3Q9ULW8 664 aa16.12■□□□□ 0.17
CACNA1A-249ENST00000637777 IGFBP4P22692 258 aa16.11■□□□□ 0.17
CACNA1A-249ENST00000637777 CRYBB1P53674 252 aaPredicted RBP16.11■□□□□ 0.17
CACNA1A-249ENST00000637777 SPIRE1Q08AE8 756 aa16.11■□□□□ 0.17
CACNA1A-249ENST00000637777 ANO5Q75V66 913 aa16.11■□□□□ 0.17
CACNA1A-249ENST00000637777 RHPN2Q8IUC4 686 aa16.11■□□□□ 0.17
CACNA1A-249ENST00000637777 C4orf19Q8IY42 314 aa16.11■□□□□ 0.17
CACNA1A-249ENST00000637777 ARNTL2Q8WYA1 636 aa16.11■□□□□ 0.17
CACNA1A-249ENST00000637777 MTMR9Q96QG7 549 aa16.11■□□□□ 0.17
CACNA1A-249ENST00000637777 RAD9AQ99638 391 aa16.11■□□□□ 0.17
CACNA1A-249ENST00000637777 LRFN2Q9ULH4 789 aa16.11■□□□□ 0.17
CACNA1A-249ENST00000637777 STXBP5LQ9Y2K9 1186 aa16.11■□□□□ 0.17
CACNA1A-249ENST00000637777 NOC2LQ9Y3T9 749 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-249ENST00000637777 SQORQ9Y6N5 450 aa16.11■□□□□ 0.17
CACNA1A-249ENST00000637777 KDM3AQ9Y4C1 1321 aa16.11■□□□□ 0.17
CACNA1A-249ENST00000637777 LCHNA4D1U4 455 aa16.1■□□□□ 0.17
CACNA1A-249ENST00000637777 K7ELQ4 463 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-249ENST00000637777 GPR182O15218 404 aa16.1■□□□□ 0.17
CACNA1A-249ENST00000637777 PDCP20941 246 aa16.1■□□□□ 0.17
CACNA1A-249ENST00000637777 TARBP2Q15633 366 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-249ENST00000637777 EXOC8Q8IYI6 725 aa16.1■□□□□ 0.17
CACNA1A-249ENST00000637777 MICALL1Q8N3F8 863 aa16.1■□□□□ 0.17
CACNA1A-249ENST00000637777 NLRP4Q96MN2 994 aa16.1■□□□□ 0.17
CACNA1A-249ENST00000637777 RAB34Q9BZG1 259 aa16.1■□□□□ 0.17
CACNA1A-249ENST00000637777 CDHR5Q9HBB8 845 aa16.1■□□□□ 0.17
CACNA1A-249ENST00000637777 SUCLA2Q9P2R7 463 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-249ENST00000637777 WRAP73Q9P2S5 460 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-249ENST00000637777 INSL6Q9Y581 213 aa16.1■□□□□ 0.17
CACNA1A-249ENST00000637777 PCDHB6Q9Y5E3 794 aa16.1■□□□□ 0.17
CACNA1A-249ENST00000637777 ARID2Q68CP9 1835 aa16.1■□□□□ 0.17
CACNA1A-249ENST00000637777 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-249ENST00000637777 MAFO75444 373 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-249ENST00000637777 SLITRK3O94933 977 aa16.09■□□□□ 0.17
CACNA1A-249ENST00000637777 RFC5P40937 340 aa16.09■□□□□ 0.17
CACNA1A-249ENST00000637777 PTGDRQ13258 359 aa16.09■□□□□ 0.17
CACNA1A-249ENST00000637777 RILPL1Q5EBL4 403 aa16.09■□□□□ 0.17
CACNA1A-249ENST00000637777 HAUS3Q68CZ6 603 aa16.09■□□□□ 0.17
CACNA1A-249ENST00000637777 ZNF710Q8N1W2 664 aa16.09■□□□□ 0.17
CACNA1A-249ENST00000637777 TMEM40Q8WWA1 233 aa16.09■□□□□ 0.17
CACNA1A-249ENST00000637777 GCOM2Q9BZD3 368 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-249ENST00000637777 ST3GAL5Q9UNP4 418 aa16.09■□□□□ 0.17
CACNA1A-249ENST00000637777 CDH23Q9H251 3354 aa16.09■□□□□ 0.17
CACNA1A-249ENST00000637777 ENPP3O14638 875 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 GPR32O75388 356 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 STBD1O95210 358 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 ZSCAN20P17040 1043 aaPredicted RBP16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 GPC3P51654 580 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 TAP1Q03518 808 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 DRP2Q13474 957 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 CUL4AQ13619 759 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 EMC2Q15006 297 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 FAM228AQ86W67 206 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 PIGOQ8TEQ8 1089 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 TCP11Q8WWU5 503 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 PSPC1Q8WXF1 523 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 PPM1EQ8WY54 764 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 TOP1MTQ969P6 601 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 TMEM143Q96AN5 459 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 MTRQ99707 1265 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 LRWD1Q9UFC0 647 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 PPME1Q9Y570 386 aa16.08■□□□□ 0.16
CACNA1A-249ENST00000637777 ZBTB39O15060 712 aa16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 GTPBP6O43824 516 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 STAG3L1P0CL83 205 aa16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 EIF4BP23588 611 aaKnown RBP16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 CCT6AP40227 531 aaKnown RBP16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 TOB1P50616 345 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 CDC42EP1Q00587 391 aa16.07■□□□□ 0.16
CACNA1A-249ENST00000637777 ZRSR1Q15695 479 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms