RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 ACTN1P12814 892 aa17.08■□□□□ 0.32
CLN5-218ENST00000637397 SNX16P57768 344 aa17.08■□□□□ 0.32
CLN5-218ENST00000637397 AP3B2Q13367 1082 aa17.08■□□□□ 0.32
CLN5-218ENST00000637397 TMED8Q6PL24 325 aaPredicted RBP17.08■□□□□ 0.32
CLN5-218ENST00000637397 DDX42Q86XP3 938 aaKnown RBP eCLIP17.08■□□□□ 0.32
CLN5-218ENST00000637397 MMGT1Q8N4V1 131 aa17.08■□□□□ 0.32
CLN5-218ENST00000637397 CEP170P1Q96L14 293 aa17.08■□□□□ 0.32
CLN5-218ENST00000637397 RNPC3Q96LT9 517 aaKnown RBP17.08■□□□□ 0.32
CLN5-218ENST00000637397 NPHP3-ACAD11A0A0J9YXS1 232 aa17.08■□□□□ 0.32
CLN5-218ENST00000637397 TPD52P55327 224 aaPredicted RBP17.08■□□□□ 0.32
CLN5-218ENST00000637397 BASP1P80723 227 aaKnown RBP17.08■□□□□ 0.32
CLN5-218ENST00000637397 PRKG1Q13976 671 aa17.08■□□□□ 0.32
CLN5-218ENST00000637397 RNF207Q6ZRF8 634 aa17.08■□□□□ 0.32
CLN5-218ENST00000637397 RPUSD2Q8IZ73 545 aaKnown RBP17.08■□□□□ 0.32
CLN5-218ENST00000637397 TTLL3Q9Y4R7 772 aa17.08■□□□□ 0.32
CLN5-218ENST00000637397 PPEF1O14829 653 aaPredicted RBP17.08■□□□□ 0.32
CLN5-218ENST00000637397 TFRCP02786 760 aaKnown RBP17.08■□□□□ 0.32
CLN5-218ENST00000637397 RNASELQ05823 741 aaKnown RBP17.08■□□□□ 0.32
CLN5-218ENST00000637397 RAD51CO43502 376 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 MT-ND3P03897 115 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 BRAFP15056 766 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 KLRC1P26715 233 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 BBS9Q3SYG4 887 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 RFFLQ8WZ73 363 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 RNF34Q969K3 372 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 GOLPH3Q9H4A6 298 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 CD209Q9NNX6 404 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 SEPT9Q9UHD8 586 aaPredicted RBP17.07■□□□□ 0.32
CLN5-218ENST00000637397 KIDINS220Q9ULH0 1771 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 MAPK13O15264 365 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 PEX3P56589 373 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 CCDC137Q6PK04 289 aaKnown RBP17.07■□□□□ 0.32
CLN5-218ENST00000637397 ADGRF4Q8IZF3 695 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 PDIA5Q14554 519 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 RFX6Q8HWS3 928 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 DHX36Q9H2U1 1008 aaKnown RBP17.07■□□□□ 0.32
CLN5-218ENST00000637397 PHF20L1A8MW92 1017 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 CCHCR1Q8TD31 782 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 HAUS1Q96CS2 278 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 TRIM51Q9BSJ1 452 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 SAYSD1Q9NPB0 183 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 DMGDHQ9UI17 866 aaKnown RBP17.07■□□□□ 0.32
CLN5-218ENST00000637397 GGT7Q9UJ14 662 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 PLAGL2Q9UPG8 496 aa17.07■□□□□ 0.32
CLN5-218ENST00000637397 CHRNA3P32297 505 aa17.06■□□□□ 0.32
CLN5-218ENST00000637397 SERPINB6P35237 376 aa17.06■□□□□ 0.32
CLN5-218ENST00000637397 TNNC2P02585 160 aa17.06■□□□□ 0.32
CLN5-218ENST00000637397 PDE6BP35913 854 aa17.06■□□□□ 0.32
CLN5-218ENST00000637397 CDKAL1Q5VV42 579 aa17.06■□□□□ 0.32
CLN5-218ENST00000637397 ERGIC2Q96RQ1 377 aa17.06■□□□□ 0.32
CLN5-218ENST00000637397 INTUQ9ULD6 942 aa17.06■□□□□ 0.32
CLN5-218ENST00000637397 CAPN6Q9Y6Q1 641 aa17.06■□□□□ 0.32
CLN5-218ENST00000637397 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
CLN5-218ENST00000637397 QRICH1Q2TAL8 776 aa17.06■□□□□ 0.32
CLN5-218ENST00000637397 DNAJC24Q6P3W2 148 aa17.06■□□□□ 0.32
CLN5-218ENST00000637397 ADAMTS13Q76LX8 1427 aa17.06■□□□□ 0.32
CLN5-218ENST00000637397 METTL13Q8N6R0 699 aa17.06■□□□□ 0.32
CLN5-218ENST00000637397 MROH2AA6NES4 1674 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 FAM187AA6NFU0 413 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 ZRANB2O95218 330 aaKnown RBP eCLIP17.05■□□□□ 0.32
CLN5-218ENST00000637397 PLS3P13797 630 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 UCHL3P15374 230 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 ATP6V0A1Q93050 837 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 DNAJC7Q99615 494 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 CALN1Q9BXU9 219 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 USP21Q9UK80 565 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 FGFR4P22455 802 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 YARSP54577 528 aaKnown RBP17.05■□□□□ 0.32
CLN5-218ENST00000637397 SPARCL1Q14515 664 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 ZBTB8OSQ8IWT0 167 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 FAM20AQ96MK3 541 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 HAUS2Q9NVX0 235 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.05■□□□□ 0.32
CLN5-218ENST00000637397 P4HA1P13674 534 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 PAXIP1Q6ZW49 1069 aaPredicted RBP17.05■□□□□ 0.32
CLN5-218ENST00000637397 XXYLT1Q8NBI6 393 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 SLC17A8Q8NDX2 589 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 PYROXD1Q8WU10 500 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 TRIM4Q9C037 500 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 SSX2IPQ9Y2D8 614 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 A0A1W2PQJ5 194 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 ZNF564Q8TBZ8 553 aaPredicted RBP17.05■□□□□ 0.32
CLN5-218ENST00000637397 KCNV2Q8TDN2 545 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 DYDC2Q96IM9 177 aa17.05■□□□□ 0.32
CLN5-218ENST00000637397 SLC9A1P19634 815 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 GALCP54803 685 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 CCDC93Q567U6 631 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 FRMD5Q7Z6J6 570 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 TRIM6Q9C030 488 aaPredicted RBP17.04■□□□□ 0.32
CLN5-218ENST00000637397 INTS2Q9H0H0 1204 aaKnown RBP17.04■□□□□ 0.32
CLN5-218ENST00000637397 ETNK1Q9HBU6 452 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 A0A0G2JND7 137 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 ESRRAP11474 423 aaPredicted RBP17.04■□□□□ 0.32
CLN5-218ENST00000637397 CD58P19256 250 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 COL15A1P39059 1388 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 BYSLQ13895 437 aaKnown RBP17.04■□□□□ 0.32
CLN5-218ENST00000637397 SUPT20HQ8NEM7 779 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 TTC7AQ9ULT0 858 aaPredicted RBP17.04■□□□□ 0.32
CLN5-218ENST00000637397 SALL1Q9NSC2 1324 aa17.04■□□□□ 0.32
CLN5-218ENST00000637397 STXBP3O00186 592 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms