RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 COL1A2P08123 1366 aa17.28■□□□□ 0.36
CTSD-207ENST00000636571 EYA4O95677 639 aa17.28■□□□□ 0.36
CTSD-207ENST00000636571 MUTP22033 750 aa17.28■□□□□ 0.36
CTSD-207ENST00000636571 PTPN11Q06124 597 aaPredicted RBP17.28■□□□□ 0.36
CTSD-207ENST00000636571 TBC1D8BQ0IIM8 1120 aa17.28■□□□□ 0.36
CTSD-207ENST00000636571 MKRN4PQ13434 485 aaPredicted RBP17.28■□□□□ 0.36
CTSD-207ENST00000636571 CAMK4Q16566 473 aa17.28■□□□□ 0.36
CTSD-207ENST00000636571 RRAGBQ5VZM2 374 aa17.28■□□□□ 0.36
CTSD-207ENST00000636571 FMR1NBQ8N0W7 255 aaPredicted RBP17.28■□□□□ 0.36
CTSD-207ENST00000636571 METTL13Q8N6R0 699 aa17.28■□□□□ 0.36
CTSD-207ENST00000636571 RAD54LQ92698 747 aa17.28■□□□□ 0.36
CTSD-207ENST00000636571 STAMQ92783 540 aa17.28■□□□□ 0.36
CTSD-207ENST00000636571 PPP1R16BQ96T49 567 aa17.28■□□□□ 0.36
CTSD-207ENST00000636571 RUSC1Q9BVN2 902 aa17.28■□□□□ 0.36
CTSD-207ENST00000636571 FAM49AQ9H0Q0 323 aaPredicted RBP17.28■□□□□ 0.36
CTSD-207ENST00000636571 SUGCTQ9HAC7 445 aa17.28■□□□□ 0.36
CTSD-207ENST00000636571 XPNPEP1Q9NQW7 623 aa17.28■□□□□ 0.36
CTSD-207ENST00000636571 CCDC39Q9UFE4 941 aa17.28■□□□□ 0.36
CTSD-207ENST00000636571 DBR1Q9UK59 544 aaKnown RBP17.28■□□□□ 0.36
CTSD-207ENST00000636571 NOD1Q9Y239 953 aa17.28■□□□□ 0.36
CTSD-207ENST00000636571 UMODL1Q5DID0 1318 aa17.27■□□□□ 0.36
CTSD-207ENST00000636571 NPHP3-ACAD11A0A0J9YXS1 232 aa17.27■□□□□ 0.35
CTSD-207ENST00000636571 ARHGEF35A5YM69 484 aa17.27■□□□□ 0.35
CTSD-207ENST00000636571 RRN3P2A6NIE6 340 aa17.27■□□□□ 0.35
CTSD-207ENST00000636571 ZNF202O95125 648 aa17.27■□□□□ 0.35
CTSD-207ENST00000636571 PLA2G4BP0C869 781 aa17.27■□□□□ 0.35
CTSD-207ENST00000636571 STAT6P42226 847 aa17.27■□□□□ 0.35
CTSD-207ENST00000636571 SLC12A3P55017 1021 aa17.27■□□□□ 0.35
CTSD-207ENST00000636571 RAD51AP2Q09MP3 1159 aa17.27■□□□□ 0.35
CTSD-207ENST00000636571 TMEM62Q0P6H9 643 aa17.27■□□□□ 0.35
CTSD-207ENST00000636571 PADI6Q6TGC4 694 aa17.27■□□□□ 0.35
CTSD-207ENST00000636571 SERINC5Q86VE9 423 aa17.27■□□□□ 0.35
CTSD-207ENST00000636571 ZNF668Q96K58 619 aaPredicted RBP17.27■□□□□ 0.35
CTSD-207ENST00000636571 CCDC43Q96MW1 224 aaKnown RBP17.27■□□□□ 0.35
CTSD-207ENST00000636571 GPRC5CQ9NQ84 441 aa17.27■□□□□ 0.35
CTSD-207ENST00000636571 XRCC6P12956 609 aaKnown RBP eCLIP17.26■□□□□ 0.35
CTSD-207ENST00000636571 POLGP54098 1239 aaPredicted RBP17.26■□□□□ 0.35
CTSD-207ENST00000636571 EMC2Q15006 297 aa17.26■□□□□ 0.35
CTSD-207ENST00000636571 EFCAB12Q6NXP0 572 aa17.26■□□□□ 0.35
CTSD-207ENST00000636571 C7orf61Q8IZ16 206 aa17.26■□□□□ 0.35
CTSD-207ENST00000636571 DNAJB3Q8WWF6 145 aa17.26■□□□□ 0.35
CTSD-207ENST00000636571 LARP4BQ92615 738 aaKnown RBP17.26■□□□□ 0.35
CTSD-207ENST00000636571 TMEM143Q96AN5 459 aa17.26■□□□□ 0.35
CTSD-207ENST00000636571 DHX33Q9H6R0 707 aaKnown RBP17.26■□□□□ 0.35
CTSD-207ENST00000636571 MROH7Q68CQ1 1323 aa17.26■□□□□ 0.35
CTSD-207ENST00000636571 SIP14410 1827 aa17.26■□□□□ 0.35
CTSD-207ENST00000636571 TRIM43BA6NCK2 446 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 DCDC2CA8MYV0 355 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 MAFO75444 373 aaPredicted RBP17.25■□□□□ 0.35
CTSD-207ENST00000636571 GNAT1P11488 350 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 ITGB8P26012 769 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 CACNB1Q02641 598 aaPredicted RBP17.25■□□□□ 0.35
CTSD-207ENST00000636571 TRIM71Q2Q1W2 868 aaKnown RBP17.25■□□□□ 0.35
CTSD-207ENST00000636571 LONRF3Q496Y0 759 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 RINT1Q6NUQ1 792 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 GRAMD1CQ8IYS0 662 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 LINC01465Q8N7H1 131 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 SYT2Q8N9I0 419 aaPredicted RBP17.25■□□□□ 0.35
CTSD-207ENST00000636571 TRIM43Q96BQ3 446 aaPredicted RBP17.25■□□□□ 0.35
CTSD-207ENST00000636571 TOX2Q96NM4 488 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 MTRQ99707 1265 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 PPP1R12CQ9BZL4 782 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 PRDM5Q9NQX1 630 aaPredicted RBP17.25■□□□□ 0.35
CTSD-207ENST00000636571 PDLIM7Q9NR12 457 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 SERTAD1Q9UHV2 236 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 PCDHA2Q9Y5H9 948 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 IGKV6-21A0A0C4DH24 114 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 FAM237AA0A1B0GTK4 181 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 SLC26A4O43511 780 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 KINO60870 393 aaKnown RBP17.25■□□□□ 0.35
CTSD-207ENST00000636571 VTNP04004 478 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 CLTBP09497 229 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 ARSHQ5FYA8 562 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 KIAA0319LQ8IZA0 1049 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 SCN5AQ14524 2016 aa17.25■□□□□ 0.35
CTSD-207ENST00000636571 MYH11P35749 1972 aa17.24■□□□□ 0.35
CTSD-207ENST00000636571 CTSHP09668 335 aa17.24■□□□□ 0.35
CTSD-207ENST00000636571 CASP1P29466 404 aa17.24■□□□□ 0.35
CTSD-207ENST00000636571 PTK7Q13308 1070 aa17.24■□□□□ 0.35
CTSD-207ENST00000636571 C1orf186Q6ZWK4 172 aa17.24■□□□□ 0.35
CTSD-207ENST00000636571 GPBP1Q86WP2 473 aa17.24■□□□□ 0.35
CTSD-207ENST00000636571 KSR1Q8IVT5 923 aa17.24■□□□□ 0.35
CTSD-207ENST00000636571 SLC7A3Q8WY07 619 aa17.24■□□□□ 0.35
CTSD-207ENST00000636571 DPF3Q92784 378 aa17.24■□□□□ 0.35
CTSD-207ENST00000636571 ERCC4Q92889 916 aaPredicted RBP17.24■□□□□ 0.35
CTSD-207ENST00000636571 OSBPL7Q9BZF2 842 aa17.24■□□□□ 0.35
CTSD-207ENST00000636571 TBX21Q9UL17 535 aa17.24■□□□□ 0.35
CTSD-207ENST00000636571 RSPH10B2B2RC85 870 aa17.23■□□□□ 0.35
CTSD-207ENST00000636571 TLR3O15455 904 aaKnown RBP17.23■□□□□ 0.35
CTSD-207ENST00000636571 ACTN4O43707 911 aaKnown RBP17.23■□□□□ 0.35
CTSD-207ENST00000636571 DGAT1O75907 488 aa17.23■□□□□ 0.35
CTSD-207ENST00000636571 RSPH10BP0C881 870 aa17.23■□□□□ 0.35
CTSD-207ENST00000636571 SYN1P17600 705 aa17.23■□□□□ 0.35
CTSD-207ENST00000636571 CYP11B2P19099 503 aa17.23■□□□□ 0.35
CTSD-207ENST00000636571 THPOP40225 353 aa17.23■□□□□ 0.35
CTSD-207ENST00000636571 HTATIP2Q9BUP3 242 aa17.23■□□□□ 0.35
CTSD-207ENST00000636571 SEZ6LQ9BYH1 1024 aa17.23■□□□□ 0.35
CTSD-207ENST00000636571 NUP62CLQ9H1M0 184 aa17.23■□□□□ 0.35
CTSD-207ENST00000636571 ATP6V0A4Q9HBG4 840 aa17.23■□□□□ 0.35
CTSD-207ENST00000636571 TMEM39AQ9NV64 488 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms