RNA–Protein interactions for RNA: ENST00000636010.1

SPTAN1-229, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 1,472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-229ENST00000636010 PTPAQ15257 358 aa12.92□□□□□ -0.34
SPTAN1-229ENST00000636010 PLEKHG4Q58EX7 1191 aa12.92□□□□□ -0.34
SPTAN1-229ENST00000636010 FBXO47Q5MNV8 452 aa12.92□□□□□ -0.34
SPTAN1-229ENST00000636010 Q7L0L9 218 aa12.92□□□□□ -0.34
SPTAN1-229ENST00000636010 RPUSD2Q8IZ73 545 aaKnown RBP12.92□□□□□ -0.34
SPTAN1-229ENST00000636010 TNPO1Q92973 898 aaKnown RBP12.92□□□□□ -0.34
SPTAN1-229ENST00000636010 USP28Q96RU2 1077 aa12.92□□□□□ -0.34
SPTAN1-229ENST00000636010 MMTAG2Q9BU76 263 aaKnown RBP12.92□□□□□ -0.34
SPTAN1-229ENST00000636010 ZSWIM4Q9H7M6 989 aa12.92□□□□□ -0.34
SPTAN1-229ENST00000636010 SUGCTQ9HAC7 445 aa12.92□□□□□ -0.34
SPTAN1-229ENST00000636010 LRWD1Q9UFC0 647 aa12.92□□□□□ -0.34
SPTAN1-229ENST00000636010 TRPV2Q9Y5S1 764 aa12.92□□□□□ -0.34
SPTAN1-229ENST00000636010 RALGAPA2Q2PPJ7 1873 aa12.92□□□□□ -0.34
SPTAN1-229ENST00000636010 TRIP11Q15643 1979 aa12.92□□□□□ -0.34
SPTAN1-229ENST00000636010 VWA3AA6NCI4 1184 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 ZBBXA8MT70 800 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 MAFO75444 373 aaPredicted RBP12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 PFKMP08237 780 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 PRPHP41219 470 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 CEBPZQ03701 1054 aaKnown RBP12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 TBC1D8BQ0IIM8 1120 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 KIZQ2M2Z5 673 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 TMEM266Q2M3C6 531 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 XKR9Q5GH70 373 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 CNKSR3Q6P9H4 555 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 NEK9Q8TD19 979 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 CHAMP1Q96JM3 812 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 CEP170P1Q96L14 293 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 OSMRQ99650 979 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 CELF4Q9BZC1 486 aaKnown RBP12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 XPNPEP1Q9NQW7 623 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 GINS2Q9Y248 185 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 EYSQ5T1H1 3165 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 REV3LO60673 3130 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 LAD1O00515 517 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 GPR32O75388 356 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 LYPLA2O95372 231 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 RPA1P27694 616 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 CD52P31358 61 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 PBX2P40425 430 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 RARRES1P49788 294 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 WDR5P61964 334 aaKnown RBP12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 FOXD4L6Q3SYB3 417 aaPredicted RBP12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 FOXD4L3Q6VB84 417 aaPredicted RBP12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 DTHD1Q6ZMT9 781 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 KCNK18Q7Z418 384 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 KSR1Q8IVT5 923 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 SNX29Q8TEQ0 813 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 LRRC15Q8TF66 581 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 LINC01599Q8WXQ3 324 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 POLR3CQ9BUI4 534 aaPredicted RBP12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 DHX33Q9H6R0 707 aaKnown RBP12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 TUFT1Q9NNX1 390 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 AKT3Q9Y243 479 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 ZDHHC9Q9Y397 364 aa12.91□□□□□ -0.34
SPTAN1-229ENST00000636010 TRANK1O15050 2925 aa12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 KDM3AQ9Y4C1 1321 aa12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 MAGEB2O15479 319 aa12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 DKC1O60832 514 aaKnown RBP eCLIP12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 F13A1P00488 732 aa12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 ZSCAN22P10073 491 aaPredicted RBP12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 CCT6AP40227 531 aaKnown RBP12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 GPC3P51654 580 aa12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 RABGGTBP53611 331 aa12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 NLRP11P59045 1033 aaKnown RBP12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 RSPH3Q86UC2 560 aa12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 TMEM143Q96AN5 459 aa12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 PNMA5Q96PV4 448 aa12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 IFIH1Q9BYX4 1025 aaKnown RBP12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 NOC2LQ9Y3T9 749 aaKnown RBP12.9□□□□□ -0.34
SPTAN1-229ENST00000636010 TDRD15B5MCY1 1934 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 PLXNA4Q9HCM2 1894 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 E9PMD0 336 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 CSDE1O75534 798 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 ARHGEF15O94989 841 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 PARNO95453 639 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 MYOGP15173 224 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 FGFR4P22455 802 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 MARCKSP29966 332 aaPredicted RBP12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 PDIA5Q14554 519 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 EMC2Q15006 297 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 SPECC1Q5M775 1068 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 IER5Q5VY09 327 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 TSHZ1Q6ZSZ6 1077 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 USP49Q70CQ1 688 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 NME8Q8N427 588 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 PLIN2Q99541 437 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 ADAMTS10Q9H324 1103 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 TMX1Q9H3N1 280 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 POLD4Q9HCU8 107 aa12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 DDX19AQ9NUU7 478 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 TFIP11Q9UBB9 837 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-229ENST00000636010 MGEA5O60502 916 aa12.88□□□□□ -0.35
SPTAN1-229ENST00000636010 USO1O60763 962 aaKnown RBP12.88□□□□□ -0.35
SPTAN1-229ENST00000636010 ACTN1P12814 892 aa12.88□□□□□ -0.35
SPTAN1-229ENST00000636010 POLGP54098 1239 aaPredicted RBP12.88□□□□□ -0.35
SPTAN1-229ENST00000636010 GRB10Q13322 594 aa12.88□□□□□ -0.35
SPTAN1-229ENST00000636010 ZNF697Q5TEC3 545 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms