RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 WDR64B1ANS9 1081 aa17.53■□□□□ 0.4
LINC00339-209ENST00000635450 MARCH6O60337 910 aa17.53■□□□□ 0.4
LINC00339-209ENST00000635450 CSPG5O95196 566 aa17.53■□□□□ 0.4
LINC00339-209ENST00000635450 CD2BP2O95400 341 aaKnown RBP17.53■□□□□ 0.4
LINC00339-209ENST00000635450 IBSPP21815 317 aaPredicted RBP17.53■□□□□ 0.4
LINC00339-209ENST00000635450 CTNNB1P35222 781 aa17.53■□□□□ 0.4
LINC00339-209ENST00000635450 CLCN3P51790 818 aa17.53■□□□□ 0.4
LINC00339-209ENST00000635450 PAK2Q13177 524 aa17.53■□□□□ 0.4
LINC00339-209ENST00000635450 GPM6BQ13491 265 aa17.53■□□□□ 0.4
LINC00339-209ENST00000635450 GNL2Q13823 731 aaKnown RBP17.53■□□□□ 0.4
LINC00339-209ENST00000635450 HLA-CQ95604 372 aa17.53■□□□□ 0.4
LINC00339-209ENST00000635450 ZNF689Q96CS4 500 aaPredicted RBP17.53■□□□□ 0.4
LINC00339-209ENST00000635450 UNC45AQ9H3U1 944 aa17.53■□□□□ 0.4
LINC00339-209ENST00000635450 LMCD1Q9NZU5 365 aa17.53■□□□□ 0.4
LINC00339-209ENST00000635450 NOC2LQ9Y3T9 749 aaKnown RBP17.53■□□□□ 0.4
LINC00339-209ENST00000635450 ARID2Q68CP9 1835 aa17.53■□□□□ 0.4
LINC00339-209ENST00000635450 H3BNC9 293 aa17.52■□□□□ 0.4
LINC00339-209ENST00000635450 M0QZ92 97 aa17.52■□□□□ 0.4
LINC00339-209ENST00000635450 VTNP04004 478 aa17.52■□□□□ 0.4
LINC00339-209ENST00000635450 SFNP31947 248 aa17.52■□□□□ 0.4
LINC00339-209ENST00000635450 PRKCEQ02156 737 aa17.52■□□□□ 0.4
LINC00339-209ENST00000635450 KIZQ2M2Z5 673 aa17.52■□□□□ 0.4
LINC00339-209ENST00000635450 PAN2Q504Q3 1202 aaKnown RBP17.52■□□□□ 0.4
LINC00339-209ENST00000635450 EARS2Q5JPH6 523 aaKnown RBP17.52■□□□□ 0.4
LINC00339-209ENST00000635450 CKAP2LQ8IYA6 745 aa17.52■□□□□ 0.4
LINC00339-209ENST00000635450 FIBCD1Q8N539 461 aa17.52■□□□□ 0.4
LINC00339-209ENST00000635450 FBXO18Q8NFZ0 1043 aa17.52■□□□□ 0.4
LINC00339-209ENST00000635450 TNFRSF25Q93038 417 aa17.52■□□□□ 0.4
LINC00339-209ENST00000635450 MRPL38Q96DV4 380 aaKnown RBP17.52■□□□□ 0.4
LINC00339-209ENST00000635450 UBE2ZQ9H832 354 aaPredicted RBP17.52■□□□□ 0.4
LINC00339-209ENST00000635450 DISC1Q9NRI5 854 aa17.52■□□□□ 0.4
LINC00339-209ENST00000635450 C5orf42Q9H799 3197 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 TMEM150BA6NC51 233 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 FAM205CA6NFA0 338 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 GRM6O15303 877 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 SLC37A4O43826 429 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 PSMD10O75832 226 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 DGKIO75912 1065 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 BAG4O95429 457 aaKnown RBP17.51■□□□□ 0.39
LINC00339-209ENST00000635450 JAK3P52333 1124 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 ZNF484Q5JVG2 852 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 MIER3Q7Z3K6 550 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 LRRC71Q8N4P6 559 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 ETNPPLQ8TBG4 499 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 BBXQ8WY36 941 aaPredicted RBP17.51■□□□□ 0.39
LINC00339-209ENST00000635450 ZNF668Q96K58 619 aaPredicted RBP17.51■□□□□ 0.39
LINC00339-209ENST00000635450 FAM20AQ96MK3 541 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 OSMRQ99650 979 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 ERVK-5Q9HDB9 667 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 HCSTQ9UBK5 93 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 COG5Q9UP83 839 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.51■□□□□ 0.39
LINC00339-209ENST00000635450 MRPL42Q9Y6G3 142 aaKnown RBP17.51■□□□□ 0.39
LINC00339-209ENST00000635450 SQORQ9Y6N5 450 aa17.51■□□□□ 0.39
LINC00339-209ENST00000635450 TBX3O15119 743 aa17.5■□□□□ 0.39
LINC00339-209ENST00000635450 NFX1Q12986 1120 aaKnown RBP17.5■□□□□ 0.39
LINC00339-209ENST00000635450 BTG3Q14201 252 aaPredicted RBP17.5■□□□□ 0.39
LINC00339-209ENST00000635450 TCEAL5Q5H9L2 206 aa17.5■□□□□ 0.39
LINC00339-209ENST00000635450 FAM228AQ86W67 206 aa17.5■□□□□ 0.39
LINC00339-209ENST00000635450 METTL13Q8N6R0 699 aa17.5■□□□□ 0.39
LINC00339-209ENST00000635450 LINC01465Q8N7H1 131 aa17.5■□□□□ 0.39
LINC00339-209ENST00000635450 RDM1Q8NG50 284 aa17.5■□□□□ 0.39
LINC00339-209ENST00000635450 SAMD11Q96NU1 681 aa17.5■□□□□ 0.39
LINC00339-209ENST00000635450 FOXP1Q9H334 677 aaPredicted RBP17.5■□□□□ 0.39
LINC00339-209ENST00000635450 SMC3Q9UQE7 1217 aa17.5■□□□□ 0.39
LINC00339-209ENST00000635450 GPR32O75388 356 aa17.49■□□□□ 0.39
LINC00339-209ENST00000635450 OATP04181 439 aa17.49■□□□□ 0.39
LINC00339-209ENST00000635450 RPLP2P05387 115 aaKnown RBP17.49■□□□□ 0.39
LINC00339-209ENST00000635450 KCNA5P22460 613 aa17.49■□□□□ 0.39
LINC00339-209ENST00000635450 AAK1Q2M2I8 961 aa17.49■□□□□ 0.39
LINC00339-209ENST00000635450 B3GNT9Q6UX72 402 aa17.49■□□□□ 0.39
LINC00339-209ENST00000635450 NPAS4Q8IUM7 802 aa17.49■□□□□ 0.39
LINC00339-209ENST00000635450 SLFN12Q8IYM2 578 aa17.49■□□□□ 0.39
LINC00339-209ENST00000635450 CLP1Q92989 425 aaKnown RBP17.49■□□□□ 0.39
LINC00339-209ENST00000635450 SH2D3AQ9BRG2 576 aa17.49■□□□□ 0.39
LINC00339-209ENST00000635450 KCNMB3Q9NPA1 279 aa17.49■□□□□ 0.39
LINC00339-209ENST00000635450 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.48■□□□□ 0.39
LINC00339-209ENST00000635450 C5orf67F2Z3F1 127 aa17.48■□□□□ 0.39
LINC00339-209ENST00000635450 RPS6KA5O75582 802 aa17.48■□□□□ 0.39
LINC00339-209ENST00000635450 GJB2P29033 226 aa17.48■□□□□ 0.39
LINC00339-209ENST00000635450 BMPR1AP36894 532 aa17.48■□□□□ 0.39
LINC00339-209ENST00000635450 DRP2Q13474 957 aa17.48■□□□□ 0.39
LINC00339-209ENST00000635450 TIGD5Q53EQ6 642 aa17.48■□□□□ 0.39
LINC00339-209ENST00000635450 POTEDQ86YR6 584 aa17.48■□□□□ 0.39
LINC00339-209ENST00000635450 NME8Q8N427 588 aa17.48■□□□□ 0.39
LINC00339-209ENST00000635450 BANK1Q8NDB2 785 aa17.48■□□□□ 0.39
LINC00339-209ENST00000635450 FAM167AQ96KS9 214 aa17.48■□□□□ 0.39
LINC00339-209ENST00000635450 FTHL17Q9BXU8 183 aa17.48■□□□□ 0.39
LINC00339-209ENST00000635450 ST3GAL5Q9UNP4 418 aa17.48■□□□□ 0.39
LINC00339-209ENST00000635450 CEP131Q9UPN4 1083 aa17.48■□□□□ 0.39
LINC00339-209ENST00000635450 H3BQ06 376 aaPredicted RBP17.47■□□□□ 0.39
LINC00339-209ENST00000635450 NEMFO60524 1076 aa17.47■□□□□ 0.39
LINC00339-209ENST00000635450 STBD1O95210 358 aa17.47■□□□□ 0.39
LINC00339-209ENST00000635450 ATP2B1P20020 1258 aa17.47■□□□□ 0.39
LINC00339-209ENST00000635450 DNAJB1P25685 340 aa17.47■□□□□ 0.39
LINC00339-209ENST00000635450 GTF2F1P35269 517 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC00339-209ENST00000635450 CAMK1Q14012 370 aa17.47■□□□□ 0.39
LINC00339-209ENST00000635450 CALCRLQ16602 461 aa17.47■□□□□ 0.39
LINC00339-209ENST00000635450 KHSRPQ92945 711 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC00339-209ENST00000635450 ADAM2Q99965 735 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms