RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 OTOP2Q7RTS6 562 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 LRRC71Q8N4P6 559 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 SNX29Q8TEQ0 813 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 APBB2Q92870 758 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 NACC1Q96RE7 527 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 SH2D3AQ9BRG2 576 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 DHX33Q9H6R0 707 aaKnown RBP16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 SUGCTQ9HAC7 445 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 DBR1Q9UK59 544 aaKnown RBP16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 CLIC4Q9Y696 253 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 LOXHD1Q8IVV2 1947 aa16.47■□□□□ 0.23
CDC42BPB-209ENST00000634889 ABHD14A-ACY1A0A1B0GW23 586 aa16.46■□□□□ 0.23
CDC42BPB-209ENST00000634889 RARRES1P49788 294 aa16.46■□□□□ 0.23
CDC42BPB-209ENST00000634889 TMEM62Q0P6H9 643 aa16.46■□□□□ 0.23
CDC42BPB-209ENST00000634889 IKBKEQ14164 716 aa16.46■□□□□ 0.23
CDC42BPB-209ENST00000634889 FBXO47Q5MNV8 452 aa16.46■□□□□ 0.23
CDC42BPB-209ENST00000634889 POTEGQ6S5H5 508 aa16.46■□□□□ 0.23
CDC42BPB-209ENST00000634889 TSHZ1Q6ZSZ6 1077 aa16.46■□□□□ 0.23
CDC42BPB-209ENST00000634889 KCTD17Q8N5Z5 321 aa16.46■□□□□ 0.23
CDC42BPB-209ENST00000634889 ZNF579Q8NAF0 562 aaKnown RBP16.46■□□□□ 0.23
CDC42BPB-209ENST00000634889 SEPT8Q92599 483 aa16.46■□□□□ 0.23
CDC42BPB-209ENST00000634889 CCDC43Q96MW1 224 aaKnown RBP16.46■□□□□ 0.23
CDC42BPB-209ENST00000634889 IFIH1Q9BYX4 1025 aaKnown RBP16.46■□□□□ 0.23
CDC42BPB-209ENST00000634889 AKT3Q9Y243 479 aa16.46■□□□□ 0.23
CDC42BPB-209ENST00000634889 TET1Q8NFU7 2136 aa16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 ZBTB39O15060 712 aa16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 SLC26A4O43511 780 aa16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 GPR32O75388 356 aa16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 DGAT1O75907 488 aa16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 VTNP04004 478 aa16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 GHRP10912 638 aa16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 LONP1P36776 959 aaKnown RBP16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 NASPP49321 788 aaPredicted RBP16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 CRYBB1P53674 252 aaPredicted RBP16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 PKP1Q13835 747 aa16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 LPIN1Q14693 890 aa16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 EMC2Q15006 297 aa16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 PIGOQ8TEQ8 1089 aa16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 ZNF396Q96N95 335 aaPredicted RBP16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 USP28Q96RU2 1077 aa16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 LAMA3Q16787 3333 aa16.45■□□□□ 0.22
CDC42BPB-209ENST00000634889 PP2D1A8MPX8 630 aa16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 ZBBXA8MT70 800 aa16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 MKRN4PQ13434 485 aaPredicted RBP16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 KIZQ2M2Z5 673 aa16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 ODR4Q5SWX8 454 aa16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 HYIQ5T013 277 aa16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 ATL3Q6DD88 541 aa16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 DBF4BQ8NFT6 615 aa16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 TCP11Q8WWU5 503 aa16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 MTRQ99707 1265 aa16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 MMTAG2Q9BU76 263 aaKnown RBP16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 NT5C3AQ9H0P0 336 aa16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 ATP6V0A4Q9HBG4 840 aa16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 DDX19AQ9NUU7 478 aaKnown RBP16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 CXXC1Q9P0U4 656 aaPredicted RBP16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 SLC4A7Q9Y6M7 1214 aa16.44■□□□□ 0.22
CDC42BPB-209ENST00000634889 MICAL3Q7RTP6 2002 aa16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 BRD1O95696 1058 aa16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 CDC25AP30304 524 aa16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 GPC3P51654 580 aa16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 NLRP11P59045 1033 aaKnown RBP16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 SMAD3P84022 425 aaKnown RBP16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 CEBPZQ03701 1054 aaKnown RBP16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 DRP2Q13474 957 aa16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 SLC39A14Q15043 492 aa16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 ECM1Q16610 540 aa16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 ZNF410Q86VK4 478 aa16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 PHOSPHO2Q8TCD6 241 aa16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 PSPC1Q8WXF1 523 aaKnown RBP16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 SLC9A7Q96T83 725 aa16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 OSBPL7Q9BZF2 842 aa16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 ADAMTS10Q9H324 1103 aa16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 SUCLA2Q9P2R7 463 aaPredicted RBP16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 FBXO2Q9UK22 296 aaPredicted RBP16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 KIAA1024Q9UPX6 916 aa16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 GINS2Q9Y248 185 aa16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 SRPRBQ9Y5M8 271 aaKnown RBP16.43■□□□□ 0.22
CDC42BPB-209ENST00000634889 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 YEATS4O95619 227 aa16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 KCNJ6P48051 423 aa16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 WDR5P61964 334 aaKnown RBP16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 PAK2Q13177 524 aa16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 TCTN1Q2MV58 587 aa16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 FOXD4L5Q5VV16 416 aaPredicted RBP16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 CABP7Q86V35 215 aa16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 LINC00301Q8NCQ3 95 aa16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 TMEM40Q8WWA1 233 aa16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 FOXD4L4Q8WXT5 416 aaPredicted RBP16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 OSMRQ99650 979 aa16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 FTHL17Q9BXU8 183 aa16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 AGO3Q9H9G7 860 aaKnown RBP16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 CDHR5Q9HBB8 845 aa16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 DNM3Q9UQ16 869 aa16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 TRIOBPQ9H2D6 2365 aa16.42■□□□□ 0.22
CDC42BPB-209ENST00000634889 ARHGEF35A5YM69 484 aa16.41■□□□□ 0.22
CDC42BPB-209ENST00000634889 GPR182O15218 404 aa16.41■□□□□ 0.22
CDC42BPB-209ENST00000634889 ASAP2O43150 1006 aa16.41■□□□□ 0.22
CDC42BPB-209ENST00000634889 EYA4O95677 639 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms