RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 MRFAP1Q9Y605 127 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 BZW2Q9Y6E2 419 aaKnown RBP6.11□□□□□ -1.43
NEK3-211ENST00000629912 MYH10P35580 1976 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 PAPPA2Q9BXP8 1791 aa6.11□□□□□ -1.43
NEK3-211ENST00000629912 ZMYM2Q9UBW7 1377 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 PFASO15067 1338 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 A0A0G2JLL6 359 aaPredicted RBP6.1□□□□□ -1.43
NEK3-211ENST00000629912 A0A0U1RQJ8 604 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 CTAGE9A4FU28 777 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 UNCXA6NJT0 531 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 LRRC53A6NM62 1247 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 RBAK-RBAKDNI3L0D1 243 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 DDX39AO00148 427 aaKnown RBP6.1□□□□□ -1.43
NEK3-211ENST00000629912 ZNF263O14978 683 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 CLIC2O15247 247 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 PMM2O15305 246 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 KRT86O43790 486 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 USO1O60763 962 aaKnown RBP6.1□□□□□ -1.43
NEK3-211ENST00000629912 RGS20O76081 388 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 IPO7O95373 1038 aaKnown RBP6.1□□□□□ -1.43
NEK3-211ENST00000629912 ABL1P00519 1130 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 PSAPP07602 524 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 XRCC5P13010 732 aaKnown RBP6.1□□□□□ -1.43
NEK3-211ENST00000629912 SCP2P22307 547 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 PON1P27169 355 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 ANXA13P27216 316 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 YWHABP31946 246 aaKnown RBP6.1□□□□□ -1.43
NEK3-211ENST00000629912 EIF4A3P38919 411 aaKnown RBP6.1□□□□□ -1.43
NEK3-211ENST00000629912 MAGEA1P43355 309 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 CASP4P49662 377 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 VAV2P52735 878 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 RTP1P59025 263 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 ENPEPQ07075 957 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 KCNA1Q09470 495 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 KIF5AQ12840 1032 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 STXBP2Q15833 593 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 EXOC3L4Q17RC7 722 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 GNPTABQ3T906 1256 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 SLC9C1Q4G0N8 1177 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 ZC2HC1CQ53FD0 456 aaPredicted RBP6.1□□□□□ -1.43
NEK3-211ENST00000629912 CCDC122Q5T0U0 273 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 C10orf76Q5T2E6 689 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 KLHDC7AQ5VTJ3 777 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 SFMBT2Q5VUG0 894 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 PAPD7Q5XG87 772 aaKnown RBP6.1□□□□□ -1.43
NEK3-211ENST00000629912 HGSNATQ68CP4 663 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 DPY19L2Q6NUT2 758 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 ABHD15Q6UXT9 468 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 GBP6Q6ZN66 633 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 RSRC2Q7L4I2 434 aaKnown RBP6.1□□□□□ -1.43
NEK3-211ENST00000629912 CACNA2D4Q7Z3S7 1137 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 IRF2BP2Q7Z5L9 587 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 PRRT2Q7Z6L0 340 aaPredicted RBP6.1□□□□□ -1.43
NEK3-211ENST00000629912 ERO1BQ86YB8 467 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 FAM186BQ8IYM0 893 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 ANKRD13AQ8IZ07 590 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 SLC35F6Q8N357 371 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 CCDC155Q8N6L0 562 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 EHBP1Q8NDI1 1231 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 SPIRE2Q8WWL2 714 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 ATRIPQ8WXE1 791 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 SLC35C1Q96A29 364 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 JAKMIP2Q96AA8 810 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 HVCN1Q96D96 273 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 DRC1Q96MC2 740 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 PURBQ96QR8 312 aaKnown RBP6.1□□□□□ -1.43
NEK3-211ENST00000629912 NAPGQ99747 312 aaPredicted RBP6.1□□□□□ -1.43
NEK3-211ENST00000629912 LSM14BQ9BX40 385 aaKnown RBP6.1□□□□□ -1.43
NEK3-211ENST00000629912 CARD6Q9BX69 1037 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 TSGA10Q9BZW7 698 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 GANQ9H2C0 597 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 POLD4Q9HCU8 107 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 PDLIM7Q9NR12 457 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 AGPAT3Q9NRZ7 376 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 RNF181Q9P0P0 153 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 TCEAL9Q9UHQ7 104 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 FZD1Q9UP38 647 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 KCNH4Q9UQ05 1017 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 USP20Q9Y2K6 914 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 SAMM50Q9Y512 469 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 PCDHA13Q9Y5I0 950 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 LOC285556D6RIA3 1793 aa6.1□□□□□ -1.43
NEK3-211ENST00000629912 LCTP09848 1927 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 ZNFX1Q9P2E3 1918 aaKnown RBP6.09□□□□□ -1.43
NEK3-211ENST00000629912 ZC3H4Q9UPT8 1303 aaKnown RBP6.09□□□□□ -1.43
NEK3-211ENST00000629912 A0A0G2JMZ2 1700 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 IGKV6D-21A0A0A0MT36 114 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 LOC102724159A0A0B4J2E5 919 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 ANO9A1A5B4 782 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 TESPA1A2RU30 521 aaPredicted RBP6.09□□□□□ -1.43
NEK3-211ENST00000629912 RCCD1A6NED2 376 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 SPDYE5A6NIY4 337 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 BACH1O14867 736 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 P4HA2O15460 535 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 AKR1B10O60218 316 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 TLR2O60603 784 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 TADA3O75528 432 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 GFPT2O94808 682 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 SLC25A27O95847 323 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 TGFB3P10600 412 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms