RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 ELF1P32519 619 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 LRRC63Q05C16 580 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 TCP11X2Q5H9J9 407 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 IQGAP3Q86VI3 1631 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 TNS3Q68CZ2 1445 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 A0A087WUV0 522 aaPredicted RBP14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 GOLGA8RI6L899 631 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 S100A5P33763 92 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 DYNLT1P63172 113 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 DDX42Q86XP3 938 aaKnown RBP eCLIP14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 TNIP2Q8NFZ5 429 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 PARVGQ9HBI0 331 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 FARP1Q9Y4F1 1045 aaPredicted RBP14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 SERPING1P05155 500 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 TMPRSS15P98073 1019 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 TSPYL6Q8N831 410 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 RBM41Q96IZ5 413 aaKnown RBP14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 NFKBIL1Q9UBC1 381 aaPredicted RBP14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 ZFP69BQ9UJL9 534 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 METP08581 1390 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 POLE2P56282 527 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 MAPRE2Q15555 327 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 RBBP7Q16576 425 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 TRIM8Q9BZR9 551 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 ZNF500O60304 480 aaPredicted RBP14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 EFTUD2Q15029 972 aaKnown RBP eCLIP14.08□□□□□ -0.168e-8■■■■■ 37.9
SYNGAP1-208ENST00000629380 C2orf69Q8N8R5 385 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 EPB41L5Q9HCM4 733 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 SENP1Q9P0U3 644 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 MBD5Q9P267 1494 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 ADGRB3O60242 1522 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 CIAO1O76071 339 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 PTGDRQ13258 359 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 TJAP1Q5JTD0 557 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 ARHGAP18Q8N392 663 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 FANCBQ8NB91 859 aa14.08□□□□□ -0.16
SYNGAP1-208ENST00000629380 PALLDQ8WX93 1383 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 ANP32DO95626 131 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 TRPC1P48995 793 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 AARSP49588 968 aaKnown RBP eCLIP14.07□□□□□ -0.162e-7■■□□□ 13.7
SYNGAP1-208ENST00000629380 COPS2P61201 443 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 ITPRIPL1Q6GPH6 555 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 TTC39CQ8N584 583 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 MASTLQ96GX5 879 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 DHX36Q9H2U1 1008 aaKnown RBP14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 DDIT3P35638 169 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 GPKOWQ92917 476 aaPredicted RBP eCLIP14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 BTBD6Q96KE9 485 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 RPF1Q9H9Y2 349 aaKnown RBP14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 KLHL38Q2WGJ6 581 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 CLEC4GQ6UXB4 293 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 RASSF3Q86WH2 238 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 RUBCNQ92622 972 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 ZFP42Q96MM3 310 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 LRRN2O75325 713 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 TIMM10P62072 90 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 NSUN2Q08J23 767 aaKnown RBP eCLIP14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 SYT2Q8N9I0 419 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 PCDHA4Q9UN74 947 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 ZNF18P17022 549 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 PTPROQ16827 1216 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 HEXIM2Q96MH2 286 aaKnown RBP14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 UIMC1Q96RL1 719 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 POLR3EQ9NVU0 708 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 INO80B-WBP1J3KQ70 363 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 PODXLO00592 558 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 THEM5Q8N1Q8 247 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 INO80BQ9C086 356 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 THAP9Q9H5L6 903 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 GOLGA8SH3BPF8 625 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 KSR1Q8IVT5 923 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 RHOT2Q8IXI1 618 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 TAB3Q8N5C8 712 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 ZNF594Q96JF6 807 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 TRIM54Q9BYV2 358 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 NNTQ13423 1086 aa14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 PPP6R3Q5H9R7 873 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-208ENST00000629380 COPEO14579 308 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 MOCS3O95396 460 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 GPIHBP1Q8IV16 184 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 WDR75Q8IWA0 830 aaKnown RBP14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 SUCLG2Q96I99 432 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 PANX2Q96RD6 677 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 FKBP3Q00688 224 aaKnown RBP14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 RBM46Q8TBY0 533 aaKnown RBP14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 TBK1Q9UHD2 729 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 MYH1P12882 1939 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 MYH2Q9UKX2 1941 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 MYH4Q9Y623 1939 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 hCG_1642624A0A1W2PR95 340 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 TCP10L2B9ZVM9 353 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 KDM1AO60341 852 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 GUCY2CP25092 1073 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 KCNA1Q09470 495 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 LRRC31Q6UY01 552 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 KIAA0825Q8IV33 1275 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 EXT2Q93063 718 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 ULK4Q96C45 1275 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 IFT43Q96FT9 208 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 DBNDD2Q9BQY9 259 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms