RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 ZNF213O14771 459 aa13.7□□□□□ -0.22
CHD2-218ENST00000629346 PLCB4Q15147 1175 aa13.7□□□□□ -0.22
CHD2-218ENST00000629346 VARS2Q5ST30 1063 aaKnown RBP13.7□□□□□ -0.22
CHD2-218ENST00000629346 CABP7Q86V35 215 aa13.7□□□□□ -0.22
CHD2-218ENST00000629346 TMEM40Q8WWA1 233 aa13.7□□□□□ -0.22
CHD2-218ENST00000629346 PIBF1Q8WXW3 757 aa13.7□□□□□ -0.22
CHD2-218ENST00000629346 CASD1Q96PB1 797 aa13.7□□□□□ -0.22
CHD2-218ENST00000629346 TMEM117Q9H0C3 514 aa13.7□□□□□ -0.22
CHD2-218ENST00000629346 ZSWIM5Q9P217 1185 aa13.7□□□□□ -0.22
CHD2-218ENST00000629346 WNT16Q9UBV4 365 aa13.7□□□□□ -0.22
CHD2-218ENST00000629346 MAD2L2Q9UI95 211 aa13.7□□□□□ -0.22
CHD2-218ENST00000629346 CDV3Q9UKY7 258 aaKnown RBP13.7□□□□□ -0.22
CHD2-218ENST00000629346 ZMYM6O95789 1325 aa13.69□□□□□ -0.22
CHD2-218ENST00000629346 ATRXP46100 2492 aa13.69□□□□□ -0.22
CHD2-218ENST00000629346 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.69□□□□□ -0.22
CHD2-218ENST00000629346 KINO60870 393 aaKnown RBP13.69□□□□□ -0.22
CHD2-218ENST00000629346 KCNA2P16389 499 aa13.69□□□□□ -0.22
CHD2-218ENST00000629346 MX1P20591 662 aa13.69□□□□□ -0.22
CHD2-218ENST00000629346 TRAF1Q13077 416 aa13.69□□□□□ -0.22
CHD2-218ENST00000629346 BMS1Q14692 1282 aaKnown RBP13.69□□□□□ -0.22
CHD2-218ENST00000629346 SLC35G1Q2M3R5 365 aa13.69□□□□□ -0.22
CHD2-218ENST00000629346 PCNX4Q63HM2 1172 aa13.69□□□□□ -0.22
CHD2-218ENST00000629346 ABI1Q8IZP0 508 aa13.69□□□□□ -0.22
CHD2-218ENST00000629346 NME8Q8N427 588 aa13.69□□□□□ -0.22
CHD2-218ENST00000629346 RNF169Q8NCN4 708 aa13.69□□□□□ -0.22
CHD2-218ENST00000629346 SMARCC2Q8TAQ2 1214 aa13.69□□□□□ -0.22
CHD2-218ENST00000629346 EVI5LQ96CN4 794 aa13.69□□□□□ -0.22
CHD2-218ENST00000629346 PCYT2Q99447 389 aa13.69□□□□□ -0.22
CHD2-218ENST00000629346 SIT1Q9Y3P8 196 aa13.69□□□□□ -0.22
CHD2-218ENST00000629346 GPR179Q6PRD1 2367 aa13.69□□□□□ -0.22
CHD2-218ENST00000629346 SMIM35A0A1B0GVV1 85 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 POTEMA6NI47 508 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 GPR182O15218 404 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 KCNA4P22459 653 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 METAP2P50579 478 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHD2-218ENST00000629346 FAM189BP81408 668 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 NMIQ13287 307 aaPredicted RBP13.68□□□□□ -0.22
CHD2-218ENST00000629346 IFIT1BQ5T764 474 aaKnown RBP13.68□□□□□ -0.22
CHD2-218ENST00000629346 USP17L6PQ6QN14 398 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 POTEGQ6S5H5 508 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 MTHFD1LQ6UB35 978 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 GPR149Q86SP6 731 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 VPS52Q8N1B4 723 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 SLC39A11Q8N1S5 342 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 LRRC43Q8N309 656 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 UBAC1Q9BSL1 405 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 AZI2Q9H6S1 392 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 ELAC1Q9H777 363 aaKnown RBP13.68□□□□□ -0.22
CHD2-218ENST00000629346 RNF19AQ9NV58 838 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 IGSF9Q9P2J2 1179 aa13.68□□□□□ -0.22
CHD2-218ENST00000629346 PALM3A6NDB9 673 aaPredicted RBP13.67□□□□□ -0.22
CHD2-218ENST00000629346 ADRB1P08588 477 aa13.67□□□□□ -0.22
CHD2-218ENST00000629346 AAMPQ13685 434 aa13.67□□□□□ -0.22
CHD2-218ENST00000629346 ODR4Q5SWX8 454 aa13.67□□□□□ -0.22
CHD2-218ENST00000629346 SLC22A17Q8WUG5 538 aa13.67□□□□□ -0.22
CHD2-218ENST00000629346 TNPO1Q92973 898 aaKnown RBP13.67□□□□□ -0.22
CHD2-218ENST00000629346 DLGAP2Q9P1A6 1054 aa13.67□□□□□ -0.22
CHD2-218ENST00000629346 PNMA6FA0A0J9YX94 578 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 PRR5-ARHGAP8B1AHC4 643 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 HOXA2O43364 376 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 LRRN2O75325 713 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 KLRC1P26715 233 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 GBP2P32456 591 aaPredicted RBP13.66□□□□□ -0.22
CHD2-218ENST00000629346 ARHGAP8P85298 464 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 HDAC1Q13547 482 aaPredicted RBP13.66□□□□□ -0.22
CHD2-218ENST00000629346 COL9A3Q14050 684 aaPredicted RBP13.66□□□□□ -0.22
CHD2-218ENST00000629346 KIZQ2M2Z5 673 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 LETM2Q2VYF4 491 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 FAM228AQ86W67 206 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 SLC44A3Q8N4M1 653 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 GPR161Q8N6U8 529 aaKnown RBP13.66□□□□□ -0.22
CHD2-218ENST00000629346 GPR152Q8TDT2 470 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 CUL5Q93034 780 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 GPRASP2Q96D09 838 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 TMEM169Q96HH4 297 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 CDHR1Q96JP9 859 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 OSMRQ99650 979 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 RTKNQ9BST9 563 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 FOXQ1Q9C009 403 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 RIOX1Q9H6W3 641 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 SFXN1Q9H9B4 322 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 USP18Q9UMW8 372 aa13.66□□□□□ -0.22
CHD2-218ENST00000629346 CYTH3O43739 400 aa13.65□□□□□ -0.22
CHD2-218ENST00000629346 N4BP1O75113 896 aaKnown RBP13.65□□□□□ -0.22
CHD2-218ENST00000629346 GLULP15104 373 aa13.65□□□□□ -0.22
CHD2-218ENST00000629346 ITGB5P18084 799 aa13.65□□□□□ -0.22
CHD2-218ENST00000629346 ALDH7A1P49419 539 aaKnown RBP13.65□□□□□ -0.22
CHD2-218ENST00000629346 STAT5BP51692 787 aa13.65□□□□□ -0.22
CHD2-218ENST00000629346 BCAR1P56945 870 aa13.65□□□□□ -0.22
CHD2-218ENST00000629346 LMNB2Q03252 620 aa13.65□□□□□ -0.22
CHD2-218ENST00000629346 MTMR1Q13613 665 aa13.65□□□□□ -0.22
CHD2-218ENST00000629346 DSC3Q14574 896 aa13.65□□□□□ -0.22
CHD2-218ENST00000629346 NONOQ15233 471 aaKnown RBP eCLIP13.65□□□□□ -0.22
CHD2-218ENST00000629346 CLLU1OSQ5K130 101 aa13.65□□□□□ -0.22
CHD2-218ENST00000629346 KIAA0319LQ8IZA0 1049 aa13.65□□□□□ -0.22
CHD2-218ENST00000629346 MAML2Q8IZL2 1156 aaPredicted RBP13.65□□□□□ -0.22
CHD2-218ENST00000629346 SECISBP2LQ93073 1101 aaKnown RBP13.65□□□□□ -0.22
CHD2-218ENST00000629346 ZBP1Q9H171 429 aa13.65□□□□□ -0.22
CHD2-218ENST00000629346 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
CHD2-218ENST00000629346 DENND4AQ7Z401 1863 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms