RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 VAV2P52735 878 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 MAP3K9P80192 1104 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 TMEM62Q0P6H9 643 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 DMP1Q13316 513 aaPredicted RBP8.18□□□□□ -1.1
PKP4-217ENST00000628904 SNX1Q13596 522 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 RPS6KA1Q15418 735 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 TRIP13Q15645 432 aaPredicted RBP8.18□□□□□ -1.1
PKP4-217ENST00000628904 DCAF15Q66K64 600 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 OTOP1Q7RTM1 612 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 HAUS6Q7Z4H7 955 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 GPR161Q8N6U8 529 aaKnown RBP8.18□□□□□ -1.1
PKP4-217ENST00000628904 BTBD6Q96KE9 485 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 NAP1L4Q99733 375 aaKnown RBP8.18□□□□□ -1.1
PKP4-217ENST00000628904 LRRC1Q9BTT6 524 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 APOL6Q9BWW8 343 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 INO80BQ9C086 356 aaPredicted RBP8.18□□□□□ -1.1
PKP4-217ENST00000628904 EPB41L5Q9HCM4 733 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 FEM1BQ9UK73 627 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 CTIFO43310 598 aaKnown RBP8.18□□□□□ -1.1
PKP4-217ENST00000628904 EIF3JO75822 258 aaKnown RBP8.18□□□□□ -1.1
PKP4-217ENST00000628904 CD19P15391 556 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 TMOD1P28289 359 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 SREBF1P36956 1147 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 QARSP47897 775 aaKnown RBP8.18□□□□□ -1.1
PKP4-217ENST00000628904 DDX42Q86XP3 938 aaKnown RBP eCLIP8.18□□□□□ -1.1
PKP4-217ENST00000628904 CBWD2Q8IUF1 395 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 ADAM33Q9BZ11 813 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 FAN1Q9Y2M0 1017 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 LAMA4Q16363 1823 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 EDIL3O43854 480 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 SNHG28P0DPA3 235 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 ZSCAN20P17040 1043 aaPredicted RBP8.18□□□□□ -1.1
PKP4-217ENST00000628904 ORC1Q13415 861 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 UGCGQ16739 394 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 ZNF280CQ8ND82 737 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 TTC16Q8NEE8 873 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 DEPTORQ8TB45 409 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 MTMR8Q96EF0 704 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 CLMNQ96JQ2 1002 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 DDX47Q9H0S4 455 aaKnown RBP8.18□□□□□ -1.1
PKP4-217ENST00000628904 ZNF446Q9NWS9 450 aa8.18□□□□□ -1.1
PKP4-217ENST00000628904 NXF1Q9UBU9 619 aaKnown RBP8.18□□□□□ -1.1
PKP4-217ENST00000628904 DUOX1Q9NRD9 1551 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 POTEB2H3BUK9 544 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 EYA4O95677 639 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 VIL1P09327 827 aaKnown RBP8.17□□□□□ -1.1
PKP4-217ENST00000628904 PLCB3Q01970 1234 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 TATDN1Q6P1N9 297 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 MCF2L2Q86YR7 1114 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 TRIM58Q8NG06 486 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 SYTL5Q8TDW5 730 aaPredicted RBP8.17□□□□□ -1.1
PKP4-217ENST00000628904 UBLCP1Q8WVY7 318 aaPredicted RBP8.17□□□□□ -1.1
PKP4-217ENST00000628904 DHX38Q92620 1227 aaKnown RBP8.17□□□□□ -1.1
PKP4-217ENST00000628904 IFT74Q96LB3 600 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 EHD4Q9H223 541 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 MAGEF1Q9HAY2 307 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 OSGEPQ9NPF4 335 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 RSPH14Q9UHP6 348 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 ZNF263O14978 683 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 MYL1P05976 194 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 GJB1P08034 283 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 H2AFZP0C0S5 128 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 HMGB2P26583 209 aaKnown RBP8.17□□□□□ -1.1
PKP4-217ENST00000628904 IFFO1Q0D2I5 559 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 KCNMA1Q12791 1236 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 TRAF1Q13077 416 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 TKFCQ3LXA3 575 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 CC2D1AQ6P1N0 951 aaPredicted RBP8.17□□□□□ -1.1
PKP4-217ENST00000628904 H2AFVQ71UI9 128 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 FAM160B2Q86V87 743 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 SYT2Q8N9I0 419 aaPredicted RBP8.17□□□□□ -1.1
PKP4-217ENST00000628904 TRAPPC12Q8WVT3 735 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 MXRA8Q9BRK3 442 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 NFU1Q9UMS0 254 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 OPLAHO14841 1288 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 CYP26A1O43174 497 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 SLC12A3P55017 1021 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 TFAMQ00059 246 aaKnown RBP8.17□□□□□ -1.1
PKP4-217ENST00000628904 STRN3Q13033 797 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 DAB2IPQ5VWQ8 1189 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 KAZNQ674X7 775 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 PDXDC1Q6P996 788 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 ANKRD7Q92527 254 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 GMCL1Q96IK5 515 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 RGS17Q9UGC6 210 aaPredicted RBP8.17□□□□□ -1.1
PKP4-217ENST00000628904 SALL4Q9UJQ4 1053 aa8.17□□□□□ -1.1
PKP4-217ENST00000628904 USP54Q70EL1 1684 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 MYH3P11055 1940 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 IGKV6D-41A0A0C4DH26 115 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 NFKBIEO00221 500 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 PDE2AO00408 941 aaPredicted RBP8.16□□□□□ -1.1
PKP4-217ENST00000628904 KRIT1O00522 736 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 EVI5O60447 810 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 ARHGAP25P42331 645 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 MXI1P50539 228 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 CKAP4Q07065 602 aaKnown RBP8.16□□□□□ -1.1
PKP4-217ENST00000628904 CBWD6Q4V339 395 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 CBWD3Q5JTY5 395 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 CBWD5Q5RIA9 395 aa8.16□□□□□ -1.1
PKP4-217ENST00000628904 IQCEQ6IPM2 695 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms