RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 MSRAQ9UJ68 235 aa15.65■□□□□ 0.1
SNRPA1-216ENST00000626000 POTEMA6NI47 508 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 GPR182O15218 404 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 DGAT1O75907 488 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 STBD1O95210 358 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 PAK2Q13177 524 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 MBTPS1Q14703 1052 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 XKR9Q5GH70 373 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 KRT79Q5XKE5 535 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 ZNF410Q86VK4 478 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 LINC01465Q8N7H1 131 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 C4orf32Q8N8J7 132 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 IGSF22Q8N9C0 903 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 DBF4BQ8NFT6 615 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 EVPLQ92817 2033 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 INO80BQ9C086 356 aaPredicted RBP15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 RGL1Q9NZL6 768 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 DAXXQ9UER7 740 aaPredicted RBP15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 AKT3Q9Y243 479 aa15.64■□□□□ 0.09
SNRPA1-216ENST00000626000 IGKV6-21A0A0C4DH24 114 aa15.63■□□□□ 0.09
SNRPA1-216ENST00000626000 ASAP2O43150 1006 aa15.63■□□□□ 0.09
SNRPA1-216ENST00000626000 WDR5P61964 334 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-216ENST00000626000 CTTNQ14247 550 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-216ENST00000626000 LPIN1Q14693 890 aa15.63■□□□□ 0.09
SNRPA1-216ENST00000626000 GPNMBQ14956 572 aa15.63■□□□□ 0.09
SNRPA1-216ENST00000626000 VWCEQ96DN2 955 aa15.63■□□□□ 0.09
SNRPA1-216ENST00000626000 SCLT1Q96NL6 688 aa15.63■□□□□ 0.09
SNRPA1-216ENST00000626000 DHX33Q9H6R0 707 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-216ENST00000626000 SUGCTQ9HAC7 445 aa15.63■□□□□ 0.09
SNRPA1-216ENST00000626000 DBR1Q9UK59 544 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-216ENST00000626000 PCDHA11Q9Y5I1 949 aa15.63■□□□□ 0.09
SNRPA1-216ENST00000626000 TET1Q8NFU7 2136 aa15.62■□□□□ 0.09
SNRPA1-216ENST00000626000 ARID2Q68CP9 1835 aa15.62■□□□□ 0.09
SNRPA1-216ENST00000626000 RPS6KA5O75582 802 aa15.62■□□□□ 0.09
SNRPA1-216ENST00000626000 GHRP10912 638 aa15.62■□□□□ 0.09
SNRPA1-216ENST00000626000 MXD4Q14582 209 aaPredicted RBP15.62■□□□□ 0.09
SNRPA1-216ENST00000626000 ZNF697Q5TEC3 545 aa15.62■□□□□ 0.09
SNRPA1-216ENST00000626000 CATSPER3Q86XQ3 398 aa15.62■□□□□ 0.09
SNRPA1-216ENST00000626000 MCPH1Q8NEM0 835 aa15.62■□□□□ 0.09
SNRPA1-216ENST00000626000 PSPC1Q8WXF1 523 aaKnown RBP15.62■□□□□ 0.09
SNRPA1-216ENST00000626000 NT5C3AQ9H0P0 336 aa15.62■□□□□ 0.09
SNRPA1-216ENST00000626000 CXXC1Q9P0U4 656 aaPredicted RBP15.62■□□□□ 0.09
SNRPA1-216ENST00000626000 MTMR6Q9Y217 621 aa15.62■□□□□ 0.09
SNRPA1-216ENST00000626000 MORC2Q9Y6X9 1032 aaPredicted RBP15.62■□□□□ 0.09
SNRPA1-216ENST00000626000 MICAL3Q7RTP6 2002 aa15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 EIF4BP23588 611 aaKnown RBP15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 CCT6AP40227 531 aaKnown RBP15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 RARRES1P49788 294 aa15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 CLCN3P51790 818 aa15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 RESTQ13127 1097 aa15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 NBR1Q14596 966 aa15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 EMC2Q15006 297 aa15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 PCBP1Q15365 356 aaKnown RBP eCLIP15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 FERMT3Q86UX7 667 aa15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 HERC6Q8IVU3 1022 aa15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 LRRC71Q8N4P6 559 aa15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 SNX29Q8TEQ0 813 aa15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 CEP89Q96ST8 783 aa15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 MTRQ99707 1265 aa15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 GCOM2Q9BZD3 368 aaPredicted RBP15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 ATP6V0A4Q9HBG4 840 aa15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 SUCLA2Q9P2R7 463 aaPredicted RBP15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 SIP14410 1827 aa15.61■□□□□ 0.09
SNRPA1-216ENST00000626000 VTNP04004 478 aa15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 SPATA31C1P0DKV0 1188 aa15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 SFPQP23246 707 aaKnown RBP eCLIP15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 DNAJB2P25686 324 aa15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 LONP1P36776 959 aaKnown RBP15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 GPC3P51654 580 aa15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 NLRP11P59045 1033 aaKnown RBP15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 TMEM62Q0P6H9 643 aa15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 TFDP1Q14186 410 aa15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 KIZQ2M2Z5 673 aa15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 PLA2G4FQ68DD2 849 aa15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 ATL3Q6DD88 541 aa15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 NLRP7Q8WX94 980 aa15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 TIFAQ96CG3 184 aa15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 CDK5RAP3Q96JB5 506 aa15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 ZNF396Q96N95 335 aaPredicted RBP15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 ZBED2Q9BTP6 218 aa15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 C1orf112Q9NSG2 853 aa15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 WRAP73Q9P2S5 460 aaPredicted RBP15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 GINS2Q9Y248 185 aa15.6■□□□□ 0.09
SNRPA1-216ENST00000626000 ARHGEF35A5YM69 484 aa15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 SOX1O00570 391 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 GPR32O75388 356 aa15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 GJB5O95377 273 aa15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 NPEPPSP55786 919 aa15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 POU5F1BQ06416 359 aa15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 MKRN4PQ13434 485 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 SF3A1Q15459 793 aaKnown RBP15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 RSPH1Q8WYR4 309 aa15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 ZBTB10Q96DT7 871 aa15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 SLC28A3Q9HAS3 691 aa15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 FOXD4L1Q9NU39 408 aa15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 PADI3Q9ULW8 664 aa15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 DNM3Q9UQ16 869 aa15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 INSL6Q9Y581 213 aa15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 COL4A3BPQ9Y5P4 624 aa15.59■□□□□ 0.09
SNRPA1-216ENST00000626000 VWA3AA6NCI4 1184 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms