RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 RC3H2Q9HBD1 1191 aaKnown RBP12.2□□□□□ -0.46
SSBP4-215ENST00000625926 C1orf112Q9NSG2 853 aa12.2□□□□□ -0.46
SSBP4-215ENST00000625926 RNF216Q9NWF9 866 aaPredicted RBP12.2□□□□□ -0.46
SSBP4-215ENST00000625926 LRFN2Q9ULH4 789 aa12.2□□□□□ -0.46
SSBP4-215ENST00000625926 AKT3Q9Y243 479 aa12.2□□□□□ -0.46
SSBP4-215ENST00000625926 DENND3A2RUS2 1198 aa12.19□□□□□ -0.46
SSBP4-215ENST00000625926 C5orf67F2Z3F1 127 aa12.19□□□□□ -0.46
SSBP4-215ENST00000625926 TBX3O15119 743 aa12.19□□□□□ -0.46
SSBP4-215ENST00000625926 MARCH6O60337 910 aa12.19□□□□□ -0.46
SSBP4-215ENST00000625926 CTNNB1P35222 781 aa12.19□□□□□ -0.46
SSBP4-215ENST00000625926 SARSP49591 514 aaKnown RBP12.19□□□□□ -0.46
SSBP4-215ENST00000625926 NLRP11P59045 1033 aaKnown RBP12.19□□□□□ -0.46
SSBP4-215ENST00000625926 PSMC5P62195 406 aa12.19□□□□□ -0.46
SSBP4-215ENST00000625926 CDC42EP1Q00587 391 aa12.19□□□□□ -0.46
SSBP4-215ENST00000625926 TARBP2Q15633 366 aaKnown RBP12.19□□□□□ -0.46
SSBP4-215ENST00000625926 SLC24A5Q71RS6 500 aa12.19□□□□□ -0.46
SSBP4-215ENST00000625926 CMTR2Q8IYT2 770 aaKnown RBP12.19□□□□□ -0.46
SSBP4-215ENST00000625926 LRRC71Q8N4P6 559 aa12.19□□□□□ -0.46
SSBP4-215ENST00000625926 LINC01465Q8N7H1 131 aa12.19□□□□□ -0.46
SSBP4-215ENST00000625926 ADAMTS19Q8TE59 1207 aa12.19□□□□□ -0.46
SSBP4-215ENST00000625926 CLP1Q92989 425 aaKnown RBP12.19□□□□□ -0.46
SSBP4-215ENST00000625926 ADAM2Q99965 735 aa12.19□□□□□ -0.46
SSBP4-215ENST00000625926 C11orf84Q9BUA3 381 aaPredicted RBP12.19□□□□□ -0.46
SSBP4-215ENST00000625926 KCNMB3Q9NPA1 279 aa12.19□□□□□ -0.46
SSBP4-215ENST00000625926 RGS18Q9NS28 235 aa12.19□□□□□ -0.46
SSBP4-215ENST00000625926 PCDHB7Q9Y5E2 793 aa12.19□□□□□ -0.46
SSBP4-215ENST00000625926 CHD9Q3L8U1 2897 aa12.18□□□□□ -0.46
SSBP4-215ENST00000625926 DDX11L8A8MPP1 907 aa12.18□□□□□ -0.46
SSBP4-215ENST00000625926 DKC1O60832 514 aaKnown RBP eCLIP12.18□□□□□ -0.46
SSBP4-215ENST00000625926 STBD1O95210 358 aa12.18□□□□□ -0.46
SSBP4-215ENST00000625926 BAG4O95429 457 aaKnown RBP12.18□□□□□ -0.46
SSBP4-215ENST00000625926 LINC00271P0C7V0 271 aa12.18□□□□□ -0.46
SSBP4-215ENST00000625926 BMP1P13497 986 aa12.18□□□□□ -0.46
SSBP4-215ENST00000625926 EIF4BP23588 611 aaKnown RBP12.18□□□□□ -0.46
SSBP4-215ENST00000625926 NR5A1Q13285 461 aa12.18□□□□□ -0.46
SSBP4-215ENST00000625926 PPP2R5CQ13362 524 aa12.18□□□□□ -0.46
SSBP4-215ENST00000625926 TRIM29Q14134 588 aa12.18□□□□□ -0.46
SSBP4-215ENST00000625926 MTERF2Q49AM1 385 aa12.18□□□□□ -0.46
SSBP4-215ENST00000625926 EARS2Q5JPH6 523 aaKnown RBP12.18□□□□□ -0.46
SSBP4-215ENST00000625926 FAM228AQ86W67 206 aa12.18□□□□□ -0.46
SSBP4-215ENST00000625926 BANK1Q8NDB2 785 aa12.18□□□□□ -0.46
SSBP4-215ENST00000625926 PLVAPQ9BX97 442 aa12.18□□□□□ -0.46
SSBP4-215ENST00000625926 ADAMTS10Q9H324 1103 aa12.18□□□□□ -0.46
SSBP4-215ENST00000625926 SEPT9Q9UHD8 586 aaPredicted RBP12.18□□□□□ -0.46
SSBP4-215ENST00000625926 VAV3Q9UKW4 847 aa12.18□□□□□ -0.46
SSBP4-215ENST00000625926 LIMCH1Q9UPQ0 1083 aa12.18□□□□□ -0.46
SSBP4-215ENST00000625926 TNFRSF10AO00220 468 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 EML1O00423 815 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 MGEA5O60502 916 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 JAK2O60674 1132 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 MMP1P03956 469 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 ZSCAN20P17040 1043 aaPredicted RBP12.17□□□□□ -0.46
SSBP4-215ENST00000625926 IBSPP21815 317 aaPredicted RBP12.17□□□□□ -0.46
SSBP4-215ENST00000625926 QARSP47897 775 aaKnown RBP12.17□□□□□ -0.46
SSBP4-215ENST00000625926 DNM2P50570 870 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 GPC3P51654 580 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 KCNQ1P51787 676 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 FAM189BP81408 668 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 TIGD5Q53EQ6 642 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 SLFN12Q8IYM2 578 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 HAS1Q92839 578 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 TNFRSF25Q93038 417 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 SCLT1Q96NL6 688 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 UHRF1Q96T88 793 aaPredicted RBP12.17□□□□□ -0.46
SSBP4-215ENST00000625926 LMAN2LQ9H0V9 348 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 MRPL42Q9Y6G3 142 aaKnown RBP12.17□□□□□ -0.46
SSBP4-215ENST00000625926 MYH7BA7E2Y1 1941 aa12.17□□□□□ -0.46
SSBP4-215ENST00000625926 TET1Q8NFU7 2136 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.16□□□□□ -0.46
SSBP4-215ENST00000625926 IGKV6-21A0A0C4DH24 114 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 TMEM150BA6NC51 233 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 BTBD18B2RXH4 712 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 C9IYK1 514 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 MAFO75444 373 aaPredicted RBP12.16□□□□□ -0.46
SSBP4-215ENST00000625926 P4HBP07237 508 aaKnown RBP12.16□□□□□ -0.46
SSBP4-215ENST00000625926 DARSP14868 501 aaKnown RBP12.16□□□□□ -0.46
SSBP4-215ENST00000625926 DSC3Q14574 896 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 EPHA7Q15375 998 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 PAN2Q504Q3 1202 aaKnown RBP12.16□□□□□ -0.46
SSBP4-215ENST00000625926 NAALADL2Q58DX5 795 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 ANO5Q75V66 913 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 POTEDQ86YR6 584 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 DIS3L2Q8IYB7 885 aaKnown RBP12.16□□□□□ -0.46
SSBP4-215ENST00000625926 NLRP7Q8WX94 980 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 P2RX5Q93086 422 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 ZNF668Q96K58 619 aaPredicted RBP12.16□□□□□ -0.46
SSBP4-215ENST00000625926 CEP89Q96ST8 783 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 JPH2Q9BR39 696 aaPredicted RBP12.16□□□□□ -0.46
SSBP4-215ENST00000625926 SH2D3AQ9BRG2 576 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 GCOM2Q9BZD3 368 aaPredicted RBP12.16□□□□□ -0.46
SSBP4-215ENST00000625926 NSUN3Q9H649 340 aaKnown RBP12.16□□□□□ -0.46
SSBP4-215ENST00000625926 ELAC1Q9H777 363 aaKnown RBP12.16□□□□□ -0.46
SSBP4-215ENST00000625926 ATP6V0A4Q9HBG4 840 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 TMEM161AQ9NX61 479 aa12.16□□□□□ -0.46
SSBP4-215ENST00000625926 FAM205CA6NFA0 338 aa12.15□□□□□ -0.46
SSBP4-215ENST00000625926 GRM6O15303 877 aa12.15□□□□□ -0.46
SSBP4-215ENST00000625926 GATMP50440 423 aa12.15□□□□□ -0.46
SSBP4-215ENST00000625926 FOSBP53539 338 aa12.15□□□□□ -0.46
SSBP4-215ENST00000625926 DRP2Q13474 957 aa12.15□□□□□ -0.46
SSBP4-215ENST00000625926 SAFBQ15424 915 aaKnown RBP eCLIP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms