RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 TRIM35Q9UPQ4 493 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 CLASP1Q7Z460 1538 aa11.92□□□□□ -0.5
VPS8-227ENST00000625842 GOLGA8SH3BPF8 625 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 ESRRBO95718 433 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 ARHGEF7Q14155 803 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 TRIM48Q8IWZ4 208 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 SCFD1Q8WVM8 642 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 STMN2Q93045 179 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 PPP1R2P1Q96PQ5 205 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 NLRC4Q9NPP4 1024 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 PPME1Q9Y570 386 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 PLSCR1O15162 318 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 ATP2C2O75185 946 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 ADCY8P40145 1251 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 PNPLA4P41247 253 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 OR1G1P47890 313 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 IFNAR2P48551 515 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 RPL10AP62906 217 aaKnown RBP11.91□□□□□ -0.5
VPS8-227ENST00000625842 SP3Q02447 781 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 LZICQ8WZA0 190 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 DYNLL2Q96FJ2 89 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 FAM207AQ9NSI2 230 aaPredicted RBP11.91□□□□□ -0.5
VPS8-227ENST00000625842 ASNSD1Q9NWL6 643 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 SAMD9LQ8IVG5 1584 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 POTEB3A0JP26 581 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 SMIM23A6NLE4 172 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 A8MXQ7 604 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 PRMT3O60678 531 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 SERPINB6P35237 376 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 NOP14P78316 857 aaKnown RBP11.91□□□□□ -0.5
VPS8-227ENST00000625842 CYP27A1Q02318 531 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 ZNF235Q14590 738 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 ITPRIPL1Q6GPH6 555 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 POTEBQ6S5H4 581 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 TTC30BQ8N4P2 665 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 CEP120Q8N960 986 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 USP13Q92995 863 aaPredicted RBP11.91□□□□□ -0.5
VPS8-227ENST00000625842 ACSF2Q96CM8 615 aaPredicted RBP11.91□□□□□ -0.5
VPS8-227ENST00000625842 KIF12Q96FN5 646 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 NAPGQ99747 312 aaPredicted RBP11.91□□□□□ -0.5
VPS8-227ENST00000625842 VCX3AQ9NNX9 186 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 NFE2L3Q9Y4A8 694 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 USP42Q9H9J4 1324 aaKnown RBP11.91□□□□□ -0.5
VPS8-227ENST00000625842 NVLO15381 856 aaKnown RBP11.91□□□□□ -0.5
VPS8-227ENST00000625842 GNRH1P01148 92 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 CUL1Q13616 776 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 CCDC184Q52MB2 194 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 EFHC2Q5JST6 749 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 RAPH1Q70E73 1250 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 TRIM42Q8IWZ5 723 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 SMAP1Q8IYB5 467 aaPredicted RBP11.91□□□□□ -0.5
VPS8-227ENST00000625842 CCDC13Q8IYE1 715 aa11.91□□□□□ -0.5
VPS8-227ENST00000625842 AKR1A1P14550 325 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 HSD17B4P51659 736 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 ARL6IP4Q66PJ3 421 aaKnown RBP11.9□□□□□ -0.5
VPS8-227ENST00000625842 MARCH10Q8NA82 808 aaPredicted RBP11.9□□□□□ -0.5
VPS8-227ENST00000625842 IFIH1Q9BYX4 1025 aaKnown RBP11.9□□□□□ -0.5
VPS8-227ENST00000625842 TAB2Q9NYJ8 693 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 AP3B1O00203 1094 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 DGAT1O75907 488 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 PLA2G4BP0C869 781 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 ATN1P54259 1190 aaPredicted RBP11.9□□□□□ -0.5
VPS8-227ENST00000625842 SEPT6Q14141 434 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 TMEM132DQ14C87 1099 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 HLFQ16534 295 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 CCDC157Q569K6 752 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 ANKRD20A3Q5VUR7 823 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 PADI6Q6TGC4 694 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 KCTD6Q8NC69 237 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 NEDD1Q8NHV4 660 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 CAPZA3Q96KX2 299 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 SPATA16Q9BXB7 569 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 VCX3BQ9H321 246 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 SUCLA2Q9P2R7 463 aaPredicted RBP11.9□□□□□ -0.5
VPS8-227ENST00000625842 PYGLP06737 847 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 VCLP18206 1134 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 THPOP40225 353 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 RAB27AP51159 221 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 RBP5P82980 135 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 MTA1Q13330 715 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 SV2CQ496J9 727 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 LMBRD2Q68DH5 695 aaPredicted RBP11.9□□□□□ -0.5
VPS8-227ENST00000625842 RGMBQ6NW40 437 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 FRA10AC1Q70Z53 315 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 ANKRD13CQ8N6S4 541 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 OR8K1Q8NGG5 319 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 DPF2Q92785 391 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 PRMT7Q9NVM4 692 aaPredicted RBP11.9□□□□□ -0.5
VPS8-227ENST00000625842 RSPH10B2B2RC85 870 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 RPN1P04843 607 aaKnown RBP11.9□□□□□ -0.5
VPS8-227ENST00000625842 CALB1P05937 261 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 RSPH10BP0C881 870 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 IFNAR1P17181 557 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 APOA5Q6Q788 366 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 PDCD6IPQ8WUM4 868 aaKnown RBP11.9□□□□□ -0.5
VPS8-227ENST00000625842 GSDMAQ96QA5 445 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 FSD1LQ9BXM9 530 aa11.9□□□□□ -0.5
VPS8-227ENST00000625842 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.9□□□□□ -0.5
VPS8-227ENST00000625842 DYRK3O43781 588 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms