RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 GRIN2DO15399 1336 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 STXBP3O00186 592 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 SOX1O00570 391 aaPredicted RBP7.3□□□□□ -1.24
TCF4-249ENST00000625716 MAFGO15525 162 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 PRPF3O43395 683 aaKnown RBP7.3□□□□□ -1.24
TCF4-249ENST00000625716 FGBP02675 491 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 ZNF286BP0CG31 522 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 SCG2P13521 617 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 CSF2RAP15509 400 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 UBA1P22314 1058 aaKnown RBP7.3□□□□□ -1.24
TCF4-249ENST00000625716 GNA11P29992 359 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 CYP2C18P33260 490 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 CCL23P55773 120 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 CCT2P78371 535 aaKnown RBP7.3□□□□□ -1.24
TCF4-249ENST00000625716 MRPS9P82933 396 aaKnown RBP7.3□□□□□ -1.24
TCF4-249ENST00000625716 SSRP1Q08945 709 aaKnown RBP7.3□□□□□ -1.24
TCF4-249ENST00000625716 BFSP2Q13515 415 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 PTGISQ16647 500 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 PFKFB3Q16875 520 aaPredicted RBP7.3□□□□□ -1.24
TCF4-249ENST00000625716 KIAA0753Q2KHM9 967 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 C9orf50Q5SZB4 431 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 PSRC1Q6PGN9 363 aaPredicted RBP7.3□□□□□ -1.24
TCF4-249ENST00000625716 CYFIP1Q7L576 1253 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 PGBD3Q8N328 593 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 EDARADDQ8WWZ3 215 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 GPRASP2Q96D09 838 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 ZNF274Q96GC6 653 aaPredicted RBP7.3□□□□□ -1.24
TCF4-249ENST00000625716 INPP4AQ96PE3 977 aaPredicted RBP7.3□□□□□ -1.24
TCF4-249ENST00000625716 NOC4LQ9BVI4 516 aaKnown RBP7.3□□□□□ -1.24
TCF4-249ENST00000625716 SLC26A6Q9BXS9 759 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 UPF3BQ9BZI7 483 aaKnown RBP7.3□□□□□ -1.24
TCF4-249ENST00000625716 ZCCHC2Q9C0B9 1178 aaKnown RBP7.3□□□□□ -1.24
TCF4-249ENST00000625716 TRMT13Q9NUP7 481 aaKnown RBP7.3□□□□□ -1.24
TCF4-249ENST00000625716 BARHL2Q9NY43 387 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 SERTAD1Q9UHV2 236 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 MYH6P13533 1939 aa7.3□□□□□ -1.24
TCF4-249ENST00000625716 FRMPD4Q14CM0 1322 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.29□□□□□ -1.24
TCF4-249ENST00000625716 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.29□□□□□ -1.24
TCF4-249ENST00000625716 ACRP10323 421 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 CYP2C9P11712 490 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 FGFR3P22607 806 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 PDIA3P30101 505 aaKnown RBP7.29□□□□□ -1.24
TCF4-249ENST00000625716 ANAPC15P60006 121 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 SP2Q02086 613 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 SP4Q02446 784 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 STK3Q13188 491 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 SEMA3FQ13275 785 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 AP3B2Q13367 1082 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 MTMR1Q13613 665 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 ANKRD1Q15327 319 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 HSDL1Q3SXM5 330 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 EFHC2Q5JST6 749 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 UTP14CQ5TAP6 766 aaKnown RBP7.29□□□□□ -1.24
TCF4-249ENST00000625716 METTL7BQ6UX53 244 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 ZNF365Q70YC5 407 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 DEFB123Q8N688 67 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 CCDC148Q8NFR7 591 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 BICD2Q8TD16 824 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 PPP1R13LQ8WUF5 828 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 KAT2BQ92831 832 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 PHKBQ93100 1093 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 POM121Q96HA1 1249 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 SENP7Q9BQF6 1050 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.29□□□□□ -1.24
TCF4-249ENST00000625716 SDF4Q9BRK5 362 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 RNF26Q9BY78 433 aaPredicted RBP7.29□□□□□ -1.24
TCF4-249ENST00000625716 AGXT2Q9BYV1 514 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 FTOQ9C0B1 505 aaKnown RBP eCLIP7.29□□□□□ -1.24
TCF4-249ENST00000625716 ALG2Q9H553 416 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 IL23AQ9NPF7 189 aa7.29□□□□□ -1.24
TCF4-249ENST00000625716 ZNF215Q9UL58 517 aaPredicted RBP7.29□□□□□ -1.24
TCF4-249ENST00000625716 MKI67P46013 3256 aaKnown RBP7.29□□□□□ -1.24
TCF4-249ENST00000625716 C17orf102A2RUQ5 167 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 H3BRB1 525 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 CDK2AP1O14519 115 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 CDKL5O76039 1030 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 F2P00734 622 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 LGALS2P05162 132 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 PFKMP08237 780 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 GNAT1P11488 350 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 ACTN1P12814 892 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 IFNAR1P17181 557 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 RFC2P35250 354 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 EPHB4P54760 987 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 EVCP57679 992 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 SMAD3P84022 425 aaKnown RBP7.28□□□□□ -1.24
TCF4-249ENST00000625716 TOB2Q14106 344 aaPredicted RBP7.28□□□□□ -1.24
TCF4-249ENST00000625716 TMEM240Q5SV17 173 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 JAKMIP3Q5VZ66 844 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 GDF6Q6KF10 455 aaPredicted RBP7.28□□□□□ -1.24
TCF4-249ENST00000625716 LINC00114Q6XXX2 140 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 DEFB128Q7Z7B8 93 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 SESTD1Q86VW0 696 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 REXO1Q8N1G1 1221 aaKnown RBP7.28□□□□□ -1.24
TCF4-249ENST00000625716 CAGE1Q8TC20 777 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 TNPO1Q92973 898 aaKnown RBP7.28□□□□□ -1.24
TCF4-249ENST00000625716 SCLYQ96I15 445 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 PGBD1Q96JS3 809 aa7.28□□□□□ -1.24
TCF4-249ENST00000625716 GPR20Q99678 358 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms