RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 MIS18BP1Q6P0N0 1132 aa22.42■■□□□ 1.18
R3HCC1-210ENST00000625275 ATP8B4Q8TF62 1192 aa22.42■■□□□ 1.18
R3HCC1-210ENST00000625275 UHRF1Q96T88 793 aaPredicted RBP22.42■■□□□ 1.18
R3HCC1-210ENST00000625275 NAP1L4Q99733 375 aaKnown RBP22.42■■□□□ 1.18
R3HCC1-210ENST00000625275 ZNF302Q9NR11 478 aa22.42■■□□□ 1.18
R3HCC1-210ENST00000625275 TBC1D22BQ9NU19 505 aa22.42■■□□□ 1.18
R3HCC1-210ENST00000625275 SQORQ9Y6N5 450 aa22.42■■□□□ 1.18
R3HCC1-210ENST00000625275 SMIM35A0A1B0GVV1 85 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 HBP1O60381 514 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 MCM7P33993 719 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 KCNQ1P51787 676 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 TMEM62Q0P6H9 643 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 ZNF174Q15697 407 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 FOXD4L6Q3SYB3 417 aaPredicted RBP22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 EPC2Q52LR7 807 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 PDXDC2PQ6P474 469 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 MTHFD1LQ6UB35 978 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 FOXD4L3Q6VB84 417 aaPredicted RBP22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 HLA-CQ95604 372 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 UIMC1Q96RL1 719 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 AGO3Q9H9G7 860 aaKnown RBP22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 CHMP5Q9NZZ3 219 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 TCEAL9Q9UHQ7 104 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 BMP1P13497 986 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 CD52P31358 61 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 ZNF746Q6NUN9 644 aaPredicted RBP22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 POTEDQ86YR6 584 aa22.41■■□□□ 1.18
R3HCC1-210ENST00000625275 TCHHQ07283 1943 aa22.4■■□□□ 1.18
R3HCC1-210ENST00000625275 MUC3AQ02505 3323 aa22.4■■□□□ 1.18
R3HCC1-210ENST00000625275 ADGRA3Q8IWK6 1321 aa22.4■■□□□ 1.18
R3HCC1-210ENST00000625275 IGSF9BQ9UPX0 1349 aa22.4■■□□□ 1.18
R3HCC1-210ENST00000625275 KDM3AQ9Y4C1 1321 aa22.4■■□□□ 1.18
R3HCC1-210ENST00000625275 ENPP3O14638 875 aa22.4■■□□□ 1.18
R3HCC1-210ENST00000625275 KRT76Q01546 638 aa22.4■■□□□ 1.18
R3HCC1-210ENST00000625275 CELF4Q9BZC1 486 aaKnown RBP22.4■■□□□ 1.18
R3HCC1-210ENST00000625275 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.4■■□□□ 1.18
R3HCC1-210ENST00000625275 NEMFO60524 1076 aa22.39■■□□□ 1.17
R3HCC1-210ENST00000625275 KLRC1P26715 233 aa22.39■■□□□ 1.17
R3HCC1-210ENST00000625275 ORC2Q13416 577 aaPredicted RBP22.39■■□□□ 1.17
R3HCC1-210ENST00000625275 SWSAP1Q6NVH7 229 aa22.39■■□□□ 1.17
R3HCC1-210ENST00000625275 TMEM192Q8IY95 271 aa22.39■■□□□ 1.17
R3HCC1-210ENST00000625275 SMAP1Q8IYB5 467 aaPredicted RBP22.39■■□□□ 1.17
R3HCC1-210ENST00000625275 NME8Q8N427 588 aa22.39■■□□□ 1.17
R3HCC1-210ENST00000625275 LINC01599Q8WXQ3 324 aa22.39■■□□□ 1.17
R3HCC1-210ENST00000625275 MRPL38Q96DV4 380 aaKnown RBP22.39■■□□□ 1.17
R3HCC1-210ENST00000625275 FTHL17Q9BXU8 183 aa22.39■■□□□ 1.17
R3HCC1-210ENST00000625275 RC3H2Q9HBD1 1191 aaKnown RBP22.39■■□□□ 1.17
R3HCC1-210ENST00000625275 MSH4O15457 936 aa22.38■■□□□ 1.17
R3HCC1-210ENST00000625275 ZNF484Q5JVG2 852 aa22.38■■□□□ 1.17
R3HCC1-210ENST00000625275 FIBCD1Q8N539 461 aa22.38■■□□□ 1.17
R3HCC1-210ENST00000625275 ETNPPLQ8TBG4 499 aa22.38■■□□□ 1.17
R3HCC1-210ENST00000625275 CHAMP1Q96JM3 812 aa22.38■■□□□ 1.17
R3HCC1-210ENST00000625275 USP28Q96RU2 1077 aa22.38■■□□□ 1.17
R3HCC1-210ENST00000625275 TMEM60Q9H2L4 133 aa22.38■■□□□ 1.17
R3HCC1-210ENST00000625275 KCNMB3Q9NPA1 279 aa22.38■■□□□ 1.17
R3HCC1-210ENST00000625275 XIRP2A4UGR9 3374 aa22.38■■□□□ 1.17
R3HCC1-210ENST00000625275 PLXNA4Q9HCM2 1894 aa22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 ZBTB42B2RXF5 422 aa22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 H3BNC9 293 aa22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 PSAPP07602 524 aa22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 ATP4AP20648 1035 aa22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 PAK2Q13177 524 aa22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 GPM6BQ13491 265 aa22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 PTPROQ16827 1216 aa22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 CKAP2LQ8IYA6 745 aa22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 GJA10Q969M2 543 aa22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 NECAB3Q96P71 396 aaPredicted RBP22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 PADI3Q9ULW8 664 aa22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 PCDHA10Q9Y5I2 948 aa22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 ATP6V1DQ9Y5K8 247 aa22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 MAFBQ9Y5Q3 323 aaPredicted RBP22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 CLIC4Q9Y696 253 aa22.37■■□□□ 1.17
R3HCC1-210ENST00000625275 DNM1Q05193 864 aaKnown RBP22.36■■□□□ 1.17
R3HCC1-210ENST00000625275 SF3A1Q15459 793 aaKnown RBP22.36■■□□□ 1.17
R3HCC1-210ENST00000625275 CALCRLQ16602 461 aa22.36■■□□□ 1.17
R3HCC1-210ENST00000625275 TIGD5Q53EQ6 642 aa22.36■■□□□ 1.17
R3HCC1-210ENST00000625275 C4orf32Q8N8J7 132 aa22.36■■□□□ 1.17
R3HCC1-210ENST00000625275 BBXQ8WY36 941 aaPredicted RBP22.36■■□□□ 1.17
R3HCC1-210ENST00000625275 HAS1Q92839 578 aa22.36■■□□□ 1.17
R3HCC1-210ENST00000625275 ZNF396Q96N95 335 aaPredicted RBP22.36■■□□□ 1.17
R3HCC1-210ENST00000625275 CTNNB1P35222 781 aa22.35■■□□□ 1.17
R3HCC1-210ENST00000625275 CEBPZQ03701 1054 aaKnown RBP22.35■■□□□ 1.17
R3HCC1-210ENST00000625275 PTGDRQ13258 359 aa22.35■■□□□ 1.17
R3HCC1-210ENST00000625275 SLC5A5Q92911 643 aa22.35■■□□□ 1.17
R3HCC1-210ENST00000625275 MTMR9Q96QG7 549 aa22.35■■□□□ 1.17
R3HCC1-210ENST00000625275 TFIP11Q9UBB9 837 aaKnown RBP22.35■■□□□ 1.17
R3HCC1-210ENST00000625275 RWDD3Q9Y3V2 267 aa22.35■■□□□ 1.17
R3HCC1-210ENST00000625275 SAMM50Q9Y512 469 aa22.35■■□□□ 1.17
R3HCC1-210ENST00000625275 WDR64B1ANS9 1081 aa22.34■■□□□ 1.17
R3HCC1-210ENST00000625275 TBX3O15119 743 aa22.34■■□□□ 1.17
R3HCC1-210ENST00000625275 DGKIO75912 1065 aa22.34■■□□□ 1.17
R3HCC1-210ENST00000625275 C22orf31O95567 290 aa22.34■■□□□ 1.17
R3HCC1-210ENST00000625275 LINC00271P0C7V0 271 aa22.34■■□□□ 1.17
R3HCC1-210ENST00000625275 RTN4RL1Q86UN2 441 aaPredicted RBP22.34■■□□□ 1.17
R3HCC1-210ENST00000625275 NPAS4Q8IUM7 802 aa22.34■■□□□ 1.17
R3HCC1-210ENST00000625275 KIAA0319LQ8IZA0 1049 aa22.34■■□□□ 1.17
R3HCC1-210ENST00000625275 ZNF689Q96CS4 500 aaPredicted RBP22.34■■□□□ 1.17
R3HCC1-210ENST00000625275 UBE2ZQ9H832 354 aaPredicted RBP22.34■■□□□ 1.17
R3HCC1-210ENST00000625275 GABBR1Q9UBS5 961 aa22.34■■□□□ 1.17
R3HCC1-210ENST00000625275 GINS2Q9Y248 185 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms