RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 FSTL4Q6MZW2 842 aa5.72□□□□□ -1.49
CDKL5-207ENST00000624700 TMC5Q6UXY8 1006 aa5.72□□□□□ -1.49
CDKL5-207ENST00000624700 RTN4RL1Q86UN2 441 aaPredicted RBP5.72□□□□□ -1.49
CDKL5-207ENST00000624700 RPGRQ92834 1020 aaKnown RBP5.72□□□□□ -1.49
CDKL5-207ENST00000624700 ERCC4Q92889 916 aaPredicted RBP5.72□□□□□ -1.49
CDKL5-207ENST00000624700 FOXRED1Q96CU9 486 aaPredicted RBP5.72□□□□□ -1.49
CDKL5-207ENST00000624700 AHCYL2Q96HN2 611 aaKnown RBP5.72□□□□□ -1.49
CDKL5-207ENST00000624700 ACAP3Q96P50 834 aa5.72□□□□□ -1.49
CDKL5-207ENST00000624700 TUBGCP5Q96RT8 1024 aa5.72□□□□□ -1.49
CDKL5-207ENST00000624700 BDH2Q9BUT1 245 aa5.72□□□□□ -1.49
CDKL5-207ENST00000624700 ZMAT4Q9H898 229 aa5.72□□□□□ -1.49
CDKL5-207ENST00000624700 SLC39A2Q9NP94 309 aa5.72□□□□□ -1.49
CDKL5-207ENST00000624700 UCKL1Q9NWZ5 548 aa5.72□□□□□ -1.49
CDKL5-207ENST00000624700 DDX56Q9NY93 547 aaKnown RBP5.72□□□□□ -1.49
CDKL5-207ENST00000624700 PRICKLE3O43900 615 aaPredicted RBP5.71□□□□□ -1.5
CDKL5-207ENST00000624700 RPL13P26373 211 aaKnown RBP5.71□□□□□ -1.5
CDKL5-207ENST00000624700 HTRA3P83110 453 aa5.71□□□□□ -1.5
CDKL5-207ENST00000624700 NFATC3Q12968 1075 aa5.71□□□□□ -1.5
CDKL5-207ENST00000624700 ADAM9Q13443 819 aa5.71□□□□□ -1.5
CDKL5-207ENST00000624700 RTP5Q14D33 572 aa5.71□□□□□ -1.5
CDKL5-207ENST00000624700 STILQ15468 1287 aa5.71□□□□□ -1.5
CDKL5-207ENST00000624700 ZFYVE27Q5T4F4 411 aa5.71□□□□□ -1.5
CDKL5-207ENST00000624700 LIPIQ6XZB0 460 aa5.71□□□□□ -1.5
CDKL5-207ENST00000624700 RPUSD2Q8IZ73 545 aaKnown RBP5.71□□□□□ -1.5
CDKL5-207ENST00000624700 CLRN3Q8NCR9 226 aa5.71□□□□□ -1.5
CDKL5-207ENST00000624700 FNIP1Q8TF40 1166 aa5.71□□□□□ -1.5
CDKL5-207ENST00000624700 FAM126AQ9BYI3 521 aaPredicted RBP5.71□□□□□ -1.5
CDKL5-207ENST00000624700 OR10A5Q9H207 317 aa5.71□□□□□ -1.5
CDKL5-207ENST00000624700 MSRAQ9UJ68 235 aa5.71□□□□□ -1.5
CDKL5-207ENST00000624700 SYNPO2Q9UMS6 1093 aa5.71□□□□□ -1.5
CDKL5-207ENST00000624700 PLA2G2DQ9UNK4 145 aa5.71□□□□□ -1.5
CDKL5-207ENST00000624700 WASHC2AQ641Q2 1341 aa5.71□□□□□ -1.5
CDKL5-207ENST00000624700 PDGFRBP09619 1106 aa5.7□□□□□ -1.5
CDKL5-207ENST00000624700 SLC6A3Q01959 620 aa5.7□□□□□ -1.5
CDKL5-207ENST00000624700 ADCY2Q08462 1091 aa5.7□□□□□ -1.5
CDKL5-207ENST00000624700 ITKQ08881 620 aa5.7□□□□□ -1.5
CDKL5-207ENST00000624700 ZXDCQ2QGD7 858 aaPredicted RBP5.7□□□□□ -1.5
CDKL5-207ENST00000624700 SLFN12LQ6IEE8 588 aa5.7□□□□□ -1.5
CDKL5-207ENST00000624700 ESRP1Q6NXG1 681 aaKnown RBP5.7□□□□□ -1.5
CDKL5-207ENST00000624700 SAPCD2Q86UD0 394 aa5.7□□□□□ -1.5
CDKL5-207ENST00000624700 CNTD1Q8N815 330 aa5.7□□□□□ -1.5
CDKL5-207ENST00000624700 RTF1Q92541 710 aaKnown RBP5.7□□□□□ -1.5
CDKL5-207ENST00000624700 NTMQ9P121 344 aa5.7□□□□□ -1.5
CDKL5-207ENST00000624700 ZFP69BQ9UJL9 534 aa5.7□□□□□ -1.5
CDKL5-207ENST00000624700 CNOT11Q9UKZ1 510 aaKnown RBP5.7□□□□□ -1.5
CDKL5-207ENST00000624700 ST20-MTHFSA0A0A6YYL1 179 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 SH3D21A4FU49 640 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 GOLGA8AA7E2F4 631 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 GOLGA8BA8MQT2 603 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 H0Y858 1186 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 KDM1AO60341 852 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 CUTAO60888 179 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 PRPF6O94906 941 aaKnown RBP5.69□□□□□ -1.5
CDKL5-207ENST00000624700 MPIG6BO95866 241 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 CFBP00751 764 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 PRLP01236 227 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 IL13P35225 146 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 THBS2P35442 1172 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 GLRBP48167 497 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 VWA3BQ502W6 1294 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 UBXN11Q5T124 520 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 SYDE2Q5VT97 1194 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 KIAA1841Q6NSI8 718 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 LHFPL2Q6ZUX7 228 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 KANSL1Q7Z3B3 1105 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 ZNF496Q96IT1 587 aaPredicted RBP5.69□□□□□ -1.5
CDKL5-207ENST00000624700 NOX5Q96PH1 765 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 AMNQ9BXJ7 453 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 METTL14Q9HCE5 456 aaKnown RBP5.69□□□□□ -1.5
CDKL5-207ENST00000624700 KCND1Q9NSA2 647 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 USP40Q9NVE5 1235 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 KCMF1Q9P0J7 381 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 CROTQ9UKG9 612 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 WASF3Q9UPY6 502 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 NUMBLQ9Y6R0 609 aa5.69□□□□□ -1.5
CDKL5-207ENST00000624700 PRKD3O94806 890 aa5.68□□□□□ -1.5
CDKL5-207ENST00000624700 MTHFD2P13995 350 aa5.68□□□□□ -1.5
CDKL5-207ENST00000624700 SARSP49591 514 aaKnown RBP5.68□□□□□ -1.5
CDKL5-207ENST00000624700 WDR72Q3MJ13 1102 aa5.68□□□□□ -1.5
CDKL5-207ENST00000624700 BRDTQ58F21 947 aaPredicted RBP5.68□□□□□ -1.5
CDKL5-207ENST00000624700 ADGRG2Q8IZP9 1017 aa5.68□□□□□ -1.5
CDKL5-207ENST00000624700 STPG3Q8N7X2 389 aa5.68□□□□□ -1.5
CDKL5-207ENST00000624700 SSH1Q8WYL5 1049 aa5.68□□□□□ -1.5
CDKL5-207ENST00000624700 FERMT2Q96AC1 680 aa5.68□□□□□ -1.5
CDKL5-207ENST00000624700 RAX2Q96IS3 184 aa5.68□□□□□ -1.5
CDKL5-207ENST00000624700 TMPRSS5Q9H3S3 457 aa5.68□□□□□ -1.5
CDKL5-207ENST00000624700 L2HGDHQ9H9P8 463 aa5.68□□□□□ -1.5
CDKL5-207ENST00000624700 FTSJ1Q9UET6 329 aa5.68□□□□□ -1.5
CDKL5-207ENST00000624700 A0A1B0GTL3 188 aa5.67□□□□□ -1.5
CDKL5-207ENST00000624700 K7ESM1 405 aa5.67□□□□□ -1.5
CDKL5-207ENST00000624700 APOL3O95236 402 aa5.67□□□□□ -1.5
CDKL5-207ENST00000624700 KNG1P01042 644 aa5.67□□□□□ -1.5
CDKL5-207ENST00000624700 PLA2G1BP04054 148 aaKnown RBP5.67□□□□□ -1.5
CDKL5-207ENST00000624700 MC4RP32245 332 aa5.67□□□□□ -1.5
CDKL5-207ENST00000624700 GPR15P49685 360 aa5.67□□□□□ -1.5
CDKL5-207ENST00000624700 SESN2P58004 480 aaPredicted RBP5.67□□□□□ -1.5
CDKL5-207ENST00000624700 EVA1CP58658 441 aa5.67□□□□□ -1.5
CDKL5-207ENST00000624700 KLF1Q13351 362 aaPredicted RBP5.67□□□□□ -1.5
CDKL5-207ENST00000624700 SMAD4Q13485 552 aaKnown RBP5.67□□□□□ -1.5
CDKL5-207ENST00000624700 FAM50AQ14320 339 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms