RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 SSU72P8A0A1W2PR75 194 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 POTEB2H3BUK9 544 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 KRT86O43790 486 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 DGAT1O75907 488 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 SLU7O95391 586 aaKnown RBP17.95■□□□□ 0.46
LDB3-208ENST00000623007 GNG11P61952 73 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 HERVK_113P62684 666 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 KCNH2Q12809 1159 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 SNAPC2Q13487 334 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 NEDD9Q14511 834 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 SPA17Q15506 151 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 TREML2Q5T2D2 321 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 SYCP3Q8IZU3 236 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 EEF2KMTQ96G04 330 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 ERO1AQ96HE7 468 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 CCDC42Q96M95 316 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 FIZ1Q96SL8 496 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 MROH8Q9H579 483 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 TAF1DQ9H5J8 278 aaPredicted RBP17.95■□□□□ 0.46
LDB3-208ENST00000623007 SLC45A1Q9Y2W3 748 aa17.95■□□□□ 0.46
LDB3-208ENST00000623007 ATP9AO75110 1047 aa17.94■□□□□ 0.46
LDB3-208ENST00000623007 ANXA13P27216 316 aa17.94■□□□□ 0.46
LDB3-208ENST00000623007 ALDH5A1P51649 535 aaPredicted RBP17.94■□□□□ 0.46
LDB3-208ENST00000623007 MAPK7Q13164 816 aa17.94■□□□□ 0.46
LDB3-208ENST00000623007 GPR162Q16538 588 aa17.94■□□□□ 0.46
LDB3-208ENST00000623007 XKR9Q5GH70 373 aa17.94■□□□□ 0.46
LDB3-208ENST00000623007 SHCBP1Q8NEM2 672 aa17.94■□□□□ 0.46
LDB3-208ENST00000623007 VTI1AQ96AJ9 217 aa17.94■□□□□ 0.46
LDB3-208ENST00000623007 ZFP91Q96JP5 570 aaPredicted RBP17.94■□□□□ 0.46
LDB3-208ENST00000623007 MAP7D2Q96T17 732 aa17.94■□□□□ 0.46
LDB3-208ENST00000623007 ASCC2Q9H1I8 757 aaPredicted RBP17.94■□□□□ 0.46
LDB3-208ENST00000623007 BZW2Q9Y6E2 419 aaKnown RBP17.94■□□□□ 0.46
LDB3-208ENST00000623007 K7ENM7 598 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 TGFB1I1O43294 461 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 N4BP1O75113 896 aaKnown RBP17.93■□□□□ 0.46
LDB3-208ENST00000623007 CCNE2O96020 404 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 EDNRBP24530 442 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 HOXD13P35453 343 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 ENPEPQ07075 957 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 LDLRAD1Q5T700 205 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 WDR59Q6PJI9 974 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 EXOC8Q8IYI6 725 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 SPIRE2Q8WWL2 714 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 NHEJ1Q9H9Q4 299 aaPredicted RBP17.93■□□□□ 0.46
LDB3-208ENST00000623007 FAM207AQ9NSI2 230 aaPredicted RBP17.93■□□□□ 0.46
LDB3-208ENST00000623007 AGPAT5Q9NUQ2 364 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 DMAC2Q9NW81 257 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 RASSF10A6NK89 507 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 USO1O60763 962 aaKnown RBP17.93■□□□□ 0.46
LDB3-208ENST00000623007 RFX1P22670 979 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 NMT1P30419 496 aaKnown RBP17.93■□□□□ 0.46
LDB3-208ENST00000623007 GTF2BQ00403 316 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 DMP1Q13316 513 aaPredicted RBP17.93■□□□□ 0.46
LDB3-208ENST00000623007 SLC9C1Q4G0N8 1177 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 XKR3Q5GH77 459 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 GBP6Q6ZN66 633 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 USP37Q86T82 979 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 NCAPG2Q86XI2 1143 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 FAM186BQ8IYM0 893 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 KCNN1Q92952 543 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 OPTNQ96CV9 577 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 NTPCRQ9BSD7 190 aaKnown RBP17.93■□□□□ 0.46
LDB3-208ENST00000623007 AGPAT3Q9NRZ7 376 aa17.93■□□□□ 0.46
LDB3-208ENST00000623007 RNF225M0QZC1 329 aaPredicted RBP17.92■□□□□ 0.46
LDB3-208ENST00000623007 ATG7O95352 703 aa17.92■□□□□ 0.46
LDB3-208ENST00000623007 NCKAP1LP55160 1127 aa17.92■□□□□ 0.46
LDB3-208ENST00000623007 ACTR2P61160 394 aa17.92■□□□□ 0.46
LDB3-208ENST00000623007 CETN1Q12798 172 aa17.92■□□□□ 0.46
LDB3-208ENST00000623007 MAPK8IP2Q13387 824 aaPredicted RBP17.92■□□□□ 0.46
LDB3-208ENST00000623007 MTF1Q14872 753 aa17.92■□□□□ 0.46
LDB3-208ENST00000623007 EXOC3L4Q17RC7 722 aa17.92■□□□□ 0.46
LDB3-208ENST00000623007 ABHD15Q6UXT9 468 aa17.92■□□□□ 0.46
LDB3-208ENST00000623007 INTS8Q75QN2 995 aaKnown RBP17.92■□□□□ 0.46
LDB3-208ENST00000623007 FAM133AQ8N9E0 248 aa17.92■□□□□ 0.46
LDB3-208ENST00000623007 DESI2Q9BSY9 194 aa17.92■□□□□ 0.46
LDB3-208ENST00000623007 DEF6Q9H4E7 631 aa17.92■□□□□ 0.46
LDB3-208ENST00000623007 BTBD7Q9P203 1132 aa17.92■□□□□ 0.46
LDB3-208ENST00000623007 KIAA1217Q5T5P2 1943 aa17.92■□□□□ 0.46
LDB3-208ENST00000623007 SFI1A8K8P3 1242 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 P4HA2O15460 535 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 AKAP3O75969 853 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 LCA5LO95447 670 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 SUPT20HL2P0C7V6 817 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 KRT13P13646 458 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 CCNA1P78396 465 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 KCNMA1Q12791 1236 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 KCTD2Q14681 263 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 SFMBT2Q5VUG0 894 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 PDXDC1Q6P996 788 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 DAW1Q8N136 415 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 SLC10A4Q96EP9 437 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 GABBR1Q9UBS5 961 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 IGSF9BQ9UPX0 1349 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 ZMYM2Q9UBW7 1377 aa17.91■□□□□ 0.46
LDB3-208ENST00000623007 ZBTB39O15060 712 aa17.9■□□□□ 0.46
LDB3-208ENST00000623007 RGS20O76081 388 aa17.9■□□□□ 0.46
LDB3-208ENST00000623007 SERPING1P05155 500 aa17.9■□□□□ 0.46
LDB3-208ENST00000623007 CCDC172P0C7W6 258 aa17.9■□□□□ 0.46
LDB3-208ENST00000623007 FAM160B1Q5W0V3 765 aa17.9■□□□□ 0.46
LDB3-208ENST00000623007 RRAGAQ7L523 313 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms