RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 PLXNA4Q9HCM2 1894 aa26.96■■□□□ 1.91
CPSF1-214ENST00000622776 ZDBF2Q9HCK1 2354 aa26.96■■□□□ 1.91
CPSF1-214ENST00000622776 GLP2RO95838 553 aa26.96■■□□□ 1.91
CPSF1-214ENST00000622776 VTNP04004 478 aa26.96■■□□□ 1.91
CPSF1-214ENST00000622776 CPA1P15085 419 aa26.96■■□□□ 1.91
CPSF1-214ENST00000622776 FAM189BP81408 668 aa26.96■■□□□ 1.91
CPSF1-214ENST00000622776 APOBRQ0VD83 1088 aa26.96■■□□□ 1.91
CPSF1-214ENST00000622776 HFE2Q6ZVN8 426 aa26.96■■□□□ 1.91
CPSF1-214ENST00000622776 SMAP1Q8IYB5 467 aaPredicted RBP26.96■■□□□ 1.91
CPSF1-214ENST00000622776 CCDC12Q8WUD4 166 aaPredicted RBP26.96■■□□□ 1.91
CPSF1-214ENST00000622776 TYW1Q9NV66 732 aaKnown RBP26.96■■□□□ 1.91
CPSF1-214ENST00000622776 BARX2Q9UMQ3 279 aaPredicted RBP26.96■■□□□ 1.91
CPSF1-214ENST00000622776 PCDHA10Q9Y5I2 948 aa26.96■■□□□ 1.91
CPSF1-214ENST00000622776 GPR32O75388 356 aa26.95■■□□□ 1.9
CPSF1-214ENST00000622776 CDC45O75419 566 aa26.95■■□□□ 1.9
CPSF1-214ENST00000622776 FGF18O76093 207 aa26.95■■□□□ 1.9
CPSF1-214ENST00000622776 PSAPP07602 524 aa26.95■■□□□ 1.9
CPSF1-214ENST00000622776 PKN1Q16512 942 aa26.95■■□□□ 1.9
CPSF1-214ENST00000622776 PRR16Q569H4 304 aa26.95■■□□□ 1.9
CPSF1-214ENST00000622776 ATP6V0A4Q9HBG4 840 aa26.95■■□□□ 1.9
CPSF1-214ENST00000622776 TLR9Q9NR96 1032 aa26.95■■□□□ 1.9
CPSF1-214ENST00000622776 TMEM161AQ9NX61 479 aa26.95■■□□□ 1.9
CPSF1-214ENST00000622776 HCSTQ9UBK5 93 aa26.95■■□□□ 1.9
CPSF1-214ENST00000622776 TCEAL9Q9UHQ7 104 aa26.95■■□□□ 1.9
CPSF1-214ENST00000622776 DSC3Q14574 896 aa26.94■■□□□ 1.9
CPSF1-214ENST00000622776 Q6ZUG5 572 aa26.94■■□□□ 1.9
CPSF1-214ENST00000622776 THNSL1Q8IYQ7 743 aa26.94■■□□□ 1.9
CPSF1-214ENST00000622776 COLGALT1Q8NBJ5 622 aa26.94■■□□□ 1.9
CPSF1-214ENST00000622776 ELAC1Q9H777 363 aaKnown RBP26.94■■□□□ 1.9
CPSF1-214ENST00000622776 GABBR1Q9UBS5 961 aa26.94■■□□□ 1.9
CPSF1-214ENST00000622776 CEP131Q9UPN4 1083 aa26.94■■□□□ 1.9
CPSF1-214ENST00000622776 USP15Q9Y4E8 981 aaPredicted RBP26.94■■□□□ 1.9
CPSF1-214ENST00000622776 PER2O15055 1255 aa26.93■■□□□ 1.9
CPSF1-214ENST00000622776 MAGEB2O15479 319 aa26.93■■□□□ 1.9
CPSF1-214ENST00000622776 PRPF3O43395 683 aaKnown RBP26.93■■□□□ 1.9
CPSF1-214ENST00000622776 FGFR1P11362 822 aa26.93■■□□□ 1.9
CPSF1-214ENST00000622776 GNA11P29992 359 aa26.93■■□□□ 1.9
CPSF1-214ENST00000622776 CIITAP33076 1130 aa26.93■■□□□ 1.9
CPSF1-214ENST00000622776 CENPQQ7L2Z9 268 aaPredicted RBP26.93■■□□□ 1.9
CPSF1-214ENST00000622776 ALYREFQ86V81 257 aaKnown RBP26.93■■□□□ 1.9
CPSF1-214ENST00000622776 BRF1Q92994 677 aa26.93■■□□□ 1.9
CPSF1-214ENST00000622776 KCNH6Q9H252 994 aa26.93■■□□□ 1.9
CPSF1-214ENST00000622776 CWH43Q9H720 699 aa26.93■■□□□ 1.9
CPSF1-214ENST00000622776 CLCN3P51790 818 aa26.92■■□□□ 1.9
CPSF1-214ENST00000622776 ERVFC1P60507 584 aa26.92■■□□□ 1.9
CPSF1-214ENST00000622776 RASGRP4Q8TDF6 673 aa26.92■■□□□ 1.9
CPSF1-214ENST00000622776 EDAQ92838 391 aa26.92■■□□□ 1.9
CPSF1-214ENST00000622776 KCNB2Q92953 911 aa26.92■■□□□ 1.9
CPSF1-214ENST00000622776 FAM167AQ96KS9 214 aa26.92■■□□□ 1.9
CPSF1-214ENST00000622776 MFSD14AQ96MC6 490 aa26.92■■□□□ 1.9
CPSF1-214ENST00000622776 FBXL18Q96ME1 805 aa26.92■■□□□ 1.9
CPSF1-214ENST00000622776 SAMM50Q9Y512 469 aa26.92■■□□□ 1.9
CPSF1-214ENST00000622776 LOC730098B7Z3J9 87 aa26.91■■□□□ 1.9
CPSF1-214ENST00000622776 LAG3P18627 525 aa26.91■■□□□ 1.9
CPSF1-214ENST00000622776 NLRP11P59045 1033 aaKnown RBP26.91■■□□□ 1.9
CPSF1-214ENST00000622776 DUSP6Q16828 381 aa26.91■■□□□ 1.9
CPSF1-214ENST00000622776 PDE12Q6L8Q7 609 aaKnown RBP26.91■■□□□ 1.9
CPSF1-214ENST00000622776 LENG9Q96B70 501 aa26.91■■□□□ 1.9
CPSF1-214ENST00000622776 JAKMIP1Q96N16 626 aaKnown RBP26.91■■□□□ 1.9
CPSF1-214ENST00000622776 MAP7D2Q96T17 732 aa26.91■■□□□ 1.9
CPSF1-214ENST00000622776 CDCA3Q99618 268 aaPredicted RBP26.91■■□□□ 1.9
CPSF1-214ENST00000622776 TMEM117Q9H0C3 514 aa26.91■■□□□ 1.9
CPSF1-214ENST00000622776 AKT3Q9Y243 479 aa26.91■■□□□ 1.9
CPSF1-214ENST00000622776 NID2Q14112 1375 aa26.9■■□□□ 1.9
CPSF1-214ENST00000622776 FSCN2O14926 492 aa26.9■■□□□ 1.9
CPSF1-214ENST00000622776 RBM10P98175 930 aaKnown RBP26.9■■□□□ 1.9
CPSF1-214ENST00000622776 AKAP17AQ02040 695 aaKnown RBP26.9■■□□□ 1.9
CPSF1-214ENST00000622776 CBX2Q14781 532 aaPredicted RBP26.9■■□□□ 1.9
CPSF1-214ENST00000622776 EFCAB12Q6NXP0 572 aa26.9■■□□□ 1.9
CPSF1-214ENST00000622776 LINC01465Q8N7H1 131 aa26.9■■□□□ 1.9
CPSF1-214ENST00000622776 VN1R2Q8NFZ6 395 aa26.9■■□□□ 1.9
CPSF1-214ENST00000622776 BICD2Q8TD16 824 aa26.9■■□□□ 1.9
CPSF1-214ENST00000622776 PHKBQ93100 1093 aa26.9■■□□□ 1.9
CPSF1-214ENST00000622776 ADAMTS10Q9H324 1103 aa26.9■■□□□ 1.9
CPSF1-214ENST00000622776 FSD2A1L4K1 749 aa26.89■■□□□ 1.9
CPSF1-214ENST00000622776 WDR64B1ANS9 1081 aa26.89■■□□□ 1.9
CPSF1-214ENST00000622776 TMOD1P28289 359 aa26.89■■□□□ 1.9
CPSF1-214ENST00000622776 NHLH1Q02575 133 aa26.89■■□□□ 1.9
CPSF1-214ENST00000622776 BLOC1S2Q6QNY1 142 aa26.89■■□□□ 1.9
CPSF1-214ENST00000622776 LRRC71Q8N4P6 559 aa26.89■■□□□ 1.9
CPSF1-214ENST00000622776 PHF7Q9BWX1 381 aaPredicted RBP26.89■■□□□ 1.9
CPSF1-214ENST00000622776 RNF19AQ9NV58 838 aa26.89■■□□□ 1.9
CPSF1-214ENST00000622776 LZTS1Q9Y250 596 aa26.89■■□□□ 1.9
CPSF1-214ENST00000622776 HOXA2O43364 376 aa26.88■■□□□ 1.89
CPSF1-214ENST00000622776 ZNF862O60290 1169 aa26.88■■□□□ 1.89
CPSF1-214ENST00000622776 ZSCAN20P17040 1043 aaPredicted RBP26.88■■□□□ 1.89
CPSF1-214ENST00000622776 PLCB3Q01970 1234 aa26.88■■□□□ 1.89
CPSF1-214ENST00000622776 ZNF710Q8N1W2 664 aa26.88■■□□□ 1.89
CPSF1-214ENST00000622776 MRPS27Q92552 414 aaKnown RBP26.88■■□□□ 1.89
CPSF1-214ENST00000622776 CASD1Q96PB1 797 aa26.88■■□□□ 1.89
CPSF1-214ENST00000622776 DISC1Q9NRI5 854 aa26.88■■□□□ 1.89
CPSF1-214ENST00000622776 NRBP2Q9NSY0 501 aa26.88■■□□□ 1.89
CPSF1-214ENST00000622776 PUF60Q9UHX1 559 aaKnown RBP26.88■■□□□ 1.89
CPSF1-214ENST00000622776 SNX14Q9Y5W7 946 aa26.88■■□□□ 1.89
CPSF1-214ENST00000622776 WDFY4Q6ZS81 3184 aa26.88■■□□□ 1.89
CPSF1-214ENST00000622776 WDR81Q562E7 1941 aa26.87■■□□□ 1.89
CPSF1-214ENST00000622776 EDIL3O43854 480 aa26.87■■□□□ 1.89
CPSF1-214ENST00000622776 OATP04181 439 aa26.87■■□□□ 1.89
CPSF1-214ENST00000622776 EIF4BP23588 611 aaKnown RBP26.87■■□□□ 1.89
CPSF1-214ENST00000622776 NTRK3Q16288 839 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms