RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 RRN3P2A6NIE6 340 aa16.76■□□□□ 0.27
SNX12-206ENST00000622259 PRR5-ARHGAP8B1AHC4 643 aa16.76■□□□□ 0.27
SNX12-206ENST00000622259 RPS6KA5O75582 802 aa16.76■□□□□ 0.27
SNX12-206ENST00000622259 CXCL14O95715 111 aa16.76■□□□□ 0.27
SNX12-206ENST00000622259 RPLP2P05387 115 aaKnown RBP16.76■□□□□ 0.27
SNX12-206ENST00000622259 PPM1AP35813 382 aa16.76■□□□□ 0.27
SNX12-206ENST00000622259 FAM189BP81408 668 aa16.76■□□□□ 0.27
SNX12-206ENST00000622259 ARHGAP8P85298 464 aa16.76■□□□□ 0.27
SNX12-206ENST00000622259 ZNF589Q86UQ0 364 aaPredicted RBP16.76■□□□□ 0.27
SNX12-206ENST00000622259 HOMER1Q86YM7 354 aa16.76■□□□□ 0.27
SNX12-206ENST00000622259 ESR2Q92731 530 aa16.76■□□□□ 0.27
SNX12-206ENST00000622259 FAM227BQ96M60 508 aa16.76■□□□□ 0.27
SNX12-206ENST00000622259 TMEM117Q9H0C3 514 aa16.76■□□□□ 0.27
SNX12-206ENST00000622259 PARD6AQ9NPB6 346 aa16.76■□□□□ 0.27
SNX12-206ENST00000622259 SIT1Q9Y3P8 196 aa16.76■□□□□ 0.27
SNX12-206ENST00000622259 A0A0D9SFI3 127 aa16.75■□□□□ 0.27
SNX12-206ENST00000622259 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.75■□□□□ 0.27
SNX12-206ENST00000622259 NT5C1B-RDH14C9J2C7 533 aa16.75■□□□□ 0.27
SNX12-206ENST00000622259 PLCB4Q15147 1175 aa16.75■□□□□ 0.27
SNX12-206ENST00000622259 ENAHQ8N8S7 591 aaPredicted RBP16.75■□□□□ 0.27
SNX12-206ENST00000622259 GPR152Q8TDT2 470 aa16.75■□□□□ 0.27
SNX12-206ENST00000622259 FOXQ1Q9C009 403 aa16.75■□□□□ 0.27
SNX12-206ENST00000622259 SMARCAD1Q9H4L7 1026 aa16.75■□□□□ 0.27
SNX12-206ENST00000622259 IGSF9Q9P2J2 1179 aa16.75■□□□□ 0.27
SNX12-206ENST00000622259 COL4A3Q01955 1670 aa16.75■□□□□ 0.27
SNX12-206ENST00000622259 ZMYM6O95789 1325 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 SMIM35A0A1B0GVV1 85 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 KLRF2D3W0D1 207 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 LMNB2Q03252 620 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 DSC3Q14574 896 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 ACAP1Q15027 740 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 PPM1JQ5JR12 505 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 PHLDB3Q6NSJ2 640 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 CABP7Q86V35 215 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 SLC44A3Q8N4M1 653 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 GPR161Q8N6U8 529 aaKnown RBP16.74■□□□□ 0.27
SNX12-206ENST00000622259 PIGSQ96S52 555 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 ZSCAN10Q96SZ4 725 aaPredicted RBP16.74■□□□□ 0.27
SNX12-206ENST00000622259 ZBP1Q9H171 429 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 DCTPP1Q9H773 170 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 ELAC1Q9H777 363 aaKnown RBP16.74■□□□□ 0.27
SNX12-206ENST00000622259 PKD2L1Q9P0L9 805 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 MAD2L2Q9UI95 211 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 SPEGQ15772 3267 aa16.74■□□□□ 0.27
SNX12-206ENST00000622259 PCP11498 1178 aaKnown RBP16.73■□□□□ 0.27
SNX12-206ENST00000622259 METAP2P50579 478 aaKnown RBP eCLIP16.73■□□□□ 0.27
SNX12-206ENST00000622259 LETM2Q2VYF4 491 aa16.73■□□□□ 0.27
SNX12-206ENST00000622259 FAM228AQ86W67 206 aa16.73■□□□□ 0.27
SNX12-206ENST00000622259 TMEM173Q86WV6 379 aaPredicted RBP16.73■□□□□ 0.27
SNX12-206ENST00000622259 LRRC43Q8N309 656 aa16.73■□□□□ 0.27
SNX12-206ENST00000622259 PPP1R16BQ96T49 567 aa16.73■□□□□ 0.27
SNX12-206ENST00000622259 SH2B1Q9NRF2 756 aaPredicted RBP16.73■□□□□ 0.27
SNX12-206ENST00000622259 HELLSQ9NRZ9 838 aa16.73■□□□□ 0.27
SNX12-206ENST00000622259 USP18Q9UMW8 372 aa16.73■□□□□ 0.27
SNX12-206ENST00000622259 DOCK8Q8NF50 2099 aa16.73■□□□□ 0.27
SNX12-206ENST00000622259 CNOT1A5YKK6 2376 aaKnown RBP16.72■□□□□ 0.27
SNX12-206ENST00000622259 SRFP11831 508 aa16.72■□□□□ 0.27
SNX12-206ENST00000622259 CLLU1OSQ5K130 101 aa16.72■□□□□ 0.27
SNX12-206ENST00000622259 PCNX4Q63HM2 1172 aa16.72■□□□□ 0.27
SNX12-206ENST00000622259 MTHFD1LQ6UB35 978 aa16.72■□□□□ 0.27
SNX12-206ENST00000622259 IQCA1Q86XH1 822 aa16.72■□□□□ 0.27
SNX12-206ENST00000622259 VPS52Q8N1B4 723 aa16.72■□□□□ 0.27
SNX12-206ENST00000622259 NME8Q8N427 588 aa16.72■□□□□ 0.27
SNX12-206ENST00000622259 PJA1Q8NG27 643 aa16.72■□□□□ 0.27
SNX12-206ENST00000622259 SFXN1Q9H9B4 322 aa16.72■□□□□ 0.27
SNX12-206ENST00000622259 ARHGEF3Q9NR81 526 aa16.72■□□□□ 0.27
SNX12-206ENST00000622259 SMG5Q9UPR3 1016 aaKnown RBP16.72■□□□□ 0.27
SNX12-206ENST00000622259 ZZEF1O43149 2961 aa16.72■□□□□ 0.27
SNX12-206ENST00000622259 B4E1Z4 1266 aa16.71■□□□□ 0.27
SNX12-206ENST00000622259 SPTLC1O15269 473 aa16.71■□□□□ 0.27
SNX12-206ENST00000622259 MCMDC2Q4G0Z9 681 aa16.71■□□□□ 0.27
SNX12-206ENST00000622259 NLRX1Q86UT6 975 aa16.71■□□□□ 0.27
SNX12-206ENST00000622259 KIAA0319LQ8IZA0 1049 aa16.71■□□□□ 0.27
SNX12-206ENST00000622259 GIMAP8Q8ND71 665 aaPredicted RBP16.71■□□□□ 0.27
SNX12-206ENST00000622259 ST13P5Q8NFI4 369 aaPredicted RBP16.71■□□□□ 0.27
SNX12-206ENST00000622259 COL26A1Q96A83 441 aa16.71■□□□□ 0.27
SNX12-206ENST00000622259 RNF41Q9H4P4 317 aaPredicted RBP16.71■□□□□ 0.27
SNX12-206ENST00000622259 CEP295Q9C0D2 2601 aa16.7■□□□□ 0.26
SNX12-206ENST00000622259 GPR182O15218 404 aa16.7■□□□□ 0.26
SNX12-206ENST00000622259 CYTH3O43739 400 aa16.7■□□□□ 0.26
SNX12-206ENST00000622259 ITGB5P18084 799 aa16.7■□□□□ 0.26
SNX12-206ENST00000622259 BCAR1P56945 870 aa16.7■□□□□ 0.26
SNX12-206ENST00000622259 WTAPQ15007 396 aa16.7■□□□□ 0.26
SNX12-206ENST00000622259 ZNF528Q3MIS6 628 aa16.7■□□□□ 0.26
SNX12-206ENST00000622259 USP17L6PQ6QN14 398 aa16.7■□□□□ 0.26
SNX12-206ENST00000622259 BCL7CQ8WUZ0 217 aaPredicted RBP16.7■□□□□ 0.26
SNX12-206ENST00000622259 MYADMQ96S97 322 aa16.7■□□□□ 0.26
SNX12-206ENST00000622259 OSMRQ99650 979 aa16.7■□□□□ 0.26
SNX12-206ENST00000622259 IRAK3Q9Y616 596 aa16.7■□□□□ 0.26
SNX12-206ENST00000622259 EVPLQ92817 2033 aa16.7■□□□□ 0.26
SNX12-206ENST00000622259 PATJQ8NI35 1801 aa16.7■□□□□ 0.26
SNX12-206ENST00000622259 LAMA4Q16363 1823 aa16.69■□□□□ 0.26
SNX12-206ENST00000622259 PALM3A6NDB9 673 aaPredicted RBP16.69■□□□□ 0.26
SNX12-206ENST00000622259 CTSAP10619 480 aa16.69■□□□□ 0.26
SNX12-206ENST00000622259 MS4A1P11836 297 aa16.69■□□□□ 0.26
SNX12-206ENST00000622259 KLRC1P26715 233 aa16.69■□□□□ 0.26
SNX12-206ENST00000622259 GBP2P32456 591 aaPredicted RBP16.69■□□□□ 0.26
SNX12-206ENST00000622259 CSTF1Q05048 431 aaKnown RBP16.69■□□□□ 0.26
SNX12-206ENST00000622259 KIZQ2M2Z5 673 aa16.69■□□□□ 0.26
SNX12-206ENST00000622259 CCDC178Q5BJE1 867 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms