RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 PDXDC2PQ6P474 469 aa12.99□□□□□ -0.33
CPNE3-210ENST00000621245 ZNF577Q9BSK1 485 aa12.99□□□□□ -0.33
CPNE3-210ENST00000621245 NSUN3Q9H649 340 aaKnown RBP12.99□□□□□ -0.33
CPNE3-210ENST00000621245 BOLA1Q9Y3E2 137 aa12.99□□□□□ -0.33
CPNE3-210ENST00000621245 MYO15AQ9UKN7 3530 aa12.99□□□□□ -0.33
CPNE3-210ENST00000621245 KDM3AQ9Y4C1 1321 aa12.98□□□□□ -0.33
CPNE3-210ENST00000621245 ZNF862O60290 1169 aa12.98□□□□□ -0.33
CPNE3-210ENST00000621245 TBX10O75333 385 aa12.98□□□□□ -0.33
CPNE3-210ENST00000621245 IRS1P35568 1242 aa12.98□□□□□ -0.33
CPNE3-210ENST00000621245 CLCN3P51790 818 aa12.98□□□□□ -0.33
CPNE3-210ENST00000621245 PTPROQ16827 1216 aa12.98□□□□□ -0.33
CPNE3-210ENST00000621245 KIZQ2M2Z5 673 aa12.98□□□□□ -0.33
CPNE3-210ENST00000621245 ADGRD2Q7Z7M1 963 aa12.98□□□□□ -0.33
CPNE3-210ENST00000621245 FAM228AQ86W67 206 aa12.98□□□□□ -0.33
CPNE3-210ENST00000621245 NPAS4Q8IUM7 802 aa12.98□□□□□ -0.33
CPNE3-210ENST00000621245 FAM178BQ8IXR5 827 aa12.98□□□□□ -0.33
CPNE3-210ENST00000621245 FBXL16Q8N461 479 aa12.98□□□□□ -0.33
CPNE3-210ENST00000621245 CCDC136Q96JN2 1154 aa12.98□□□□□ -0.33
CPNE3-210ENST00000621245 ZNF668Q96K58 619 aaPredicted RBP12.98□□□□□ -0.33
CPNE3-210ENST00000621245 OSMRQ99650 979 aa12.98□□□□□ -0.33
CPNE3-210ENST00000621245 MAFBQ9Y5Q3 323 aaPredicted RBP12.98□□□□□ -0.33
CPNE3-210ENST00000621245 COL1A2P08123 1366 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 USP34Q70CQ2 3546 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 TMEM150BA6NC51 233 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 GRXCR2A6NFK2 248 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 MSH4O15457 936 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 HBP1O60381 514 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 ITGB1P05556 798 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 IFNAR1P17181 557 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 NFX1Q12986 1120 aaKnown RBP12.97□□□□□ -0.33
CPNE3-210ENST00000621245 NPY5RQ15761 445 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 FAM160B1Q5W0V3 765 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 MIS18BP1Q6P0N0 1132 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 EP400NLQ6ZTU2 488 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 TEX2Q8IWB9 1127 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 PABPC5Q96DU9 382 aaKnown RBP12.97□□□□□ -0.33
CPNE3-210ENST00000621245 LRFN3Q9BTN0 628 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 RNF26Q9BY78 433 aaPredicted RBP12.97□□□□□ -0.33
CPNE3-210ENST00000621245 UPF3BQ9BZI7 483 aaKnown RBP12.97□□□□□ -0.33
CPNE3-210ENST00000621245 GLT8D2Q9H1C3 349 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 UNC45AQ9H3U1 944 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 OCEL1Q9H607 264 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 C6orf50Q9HD87 102 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 CLDND1Q9NY35 253 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 GABBR1Q9UBS5 961 aa12.97□□□□□ -0.33
CPNE3-210ENST00000621245 MUC6Q6W4X9 2439 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 CCDC196A0A1B0GTZ2 297 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 M0QZ92 97 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 CHMP2AO43633 222 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 GPR32O75388 356 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 TDP2O95551 362 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 MMP1P03956 469 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 CIITAP33076 1130 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 SLC26A2P50443 739 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 EVCP57679 992 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 SETQ01105 290 aaPredicted RBP12.96□□□□□ -0.33
CPNE3-210ENST00000621245 STK3Q13188 491 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 CTC1Q2NKJ3 1217 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 ZNF484Q5JVG2 852 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 FAM102BQ5T8I3 360 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 ZNF746Q6NUN9 644 aaPredicted RBP12.96□□□□□ -0.33
CPNE3-210ENST00000621245 RUFY3Q7L099 469 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 CKAP2LQ8IYA6 745 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 CMTR2Q8IYT2 770 aaKnown RBP12.96□□□□□ -0.33
CPNE3-210ENST00000621245 LRRC71Q8N4P6 559 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 LINC01465Q8N7H1 131 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 KLHL23Q8NBE8 558 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 ADAM2Q99965 735 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 C11orf84Q9BUA3 381 aaPredicted RBP12.96□□□□□ -0.33
CPNE3-210ENST00000621245 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 ST3GAL5Q9UNP4 418 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 PLAGL2Q9UPG8 496 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 SQORQ9Y6N5 450 aa12.96□□□□□ -0.33
CPNE3-210ENST00000621245 M0R2N6 131 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 ATMINO43313 823 aaPredicted RBP12.95□□□□□ -0.34
CPNE3-210ENST00000621245 RPS6KA5O75582 802 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 RB1P06400 928 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 FGFR1P11362 822 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 FGFR4P22455 802 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 SARSP49591 514 aaKnown RBP12.95□□□□□ -0.34
CPNE3-210ENST00000621245 RBM10P98175 930 aaKnown RBP12.95□□□□□ -0.34
CPNE3-210ENST00000621245 PRKCEQ02156 737 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 DRP2Q13474 957 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 METTL13Q8N6R0 699 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 SPPL3Q8TCT6 385 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 SLC5A5Q92911 643 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 SH2D3AQ9BRG2 576 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 FTHL17Q9BXU8 183 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 IGFLR1Q9H665 355 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 GJB4Q9NTQ9 266 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 RNF19AQ9NV58 838 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 PCDHA10Q9Y5I2 948 aa12.95□□□□□ -0.34
CPNE3-210ENST00000621245 C9IYK1 514 aa12.94□□□□□ -0.34
CPNE3-210ENST00000621245 GLP2RO95838 553 aa12.94□□□□□ -0.34
CPNE3-210ENST00000621245 PSAPP07602 524 aa12.94□□□□□ -0.34
CPNE3-210ENST00000621245 GNA11P29992 359 aa12.94□□□□□ -0.34
CPNE3-210ENST00000621245 ZP2Q05996 745 aa12.94□□□□□ -0.34
CPNE3-210ENST00000621245 DSC3Q14574 896 aa12.94□□□□□ -0.34
CPNE3-210ENST00000621245 SMAP1Q8IYB5 467 aaPredicted RBP12.94□□□□□ -0.34
CPNE3-210ENST00000621245 GJD3Q8N144 294 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 364.1 ms