RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 Q3C1V9 767 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 LONRF3Q496Y0 759 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 DDHD1Q8NEL9 900 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 VIPAS39Q9H9C1 493 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 OLFML3Q9NRN5 406 aa7.66□□□□□ -1.18
COLCA1-205ENST00000620864 NOVA2Q9UNW9 492 aaKnown RBP7.66□□□□□ -1.18
COLCA1-205ENST00000620864 TBKBP1A7MCY6 615 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 DIAPH2O60879 1101 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 TOMM70O94826 608 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 SERPING1P05155 500 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 PLS3P13797 630 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 ACADSP16219 412 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 ALCAMQ13740 583 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 KIF19Q2TAC6 998 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 PPP4R3CPQ6ZMV5 832 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 NOSTRINQ8IVI9 506 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 NDUFAF2Q8N183 169 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 CEP95Q96GE4 821 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 NR1H4Q96RI1 486 aaPredicted RBP7.65□□□□□ -1.18
COLCA1-205ENST00000620864 PLIN2Q99541 437 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 PPARGC1AQ9UBK2 798 aaKnown RBP7.65□□□□□ -1.18
COLCA1-205ENST00000620864 ATP8B3O60423 1300 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 BUB1O43683 1085 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 TBC1D4O60343 1298 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 NUP62P37198 522 aaPredicted RBP7.65□□□□□ -1.18
COLCA1-205ENST00000620864 PLTPP55058 493 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 GOLGA8FQ08AF8 430 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 GOLGA8DPQ0D2H9 430 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 TP53BP2Q13625 1128 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 RGS9BPQ6ZS82 235 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 RFX6Q8HWS3 928 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 CYTH2Q99418 400 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 PRG3Q9Y2Y8 225 aaPredicted RBP7.65□□□□□ -1.18
COLCA1-205ENST00000620864 SNX14Q9Y5W7 946 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 NBNO60934 754 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 GGPS1O95749 300 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 HOXB7P09629 217 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 MAPK4P31152 587 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 EPM2AIP1Q7L775 607 aaPredicted RBP7.65□□□□□ -1.18
COLCA1-205ENST00000620864 RYBPQ8N488 228 aaPredicted RBP7.65□□□□□ -1.18
COLCA1-205ENST00000620864 KCTD17Q8N5Z5 321 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 C3orf20Q8ND61 904 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 TTLL11Q8NHH1 800 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 DEPTORQ8TB45 409 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 PYROXD1Q8WU10 500 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 DESI2Q9BSY9 194 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 KDM4CQ9H3R0 1056 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 EML4Q9HC35 981 aaKnown RBP7.65□□□□□ -1.18
COLCA1-205ENST00000620864 SMYD2Q9NRG4 433 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 TMEM63CQ9P1W3 806 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 UVRAGQ9P2Y5 699 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 ABCC12Q96J65 1359 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 RGS12O14924 1447 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 ADGRL3Q9HAR2 1447 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 CDC27P30260 824 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 ARL4CP56559 192 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 MAN2A1Q16706 1144 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 CCDC184Q52MB2 194 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 COLEC12Q5KU26 742 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 DEPDC1Q5TB30 811 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 CCDC127Q96BQ5 260 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 BTBD6Q96KE9 485 aa7.65□□□□□ -1.18
COLCA1-205ENST00000620864 QKIQ96PU8 341 aaKnown RBP eCLIP7.65□□□□□ -1.18
COLCA1-205ENST00000620864 CFLARO15519 480 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 KRT6AP02538 564 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 KRT6BP04259 564 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 S100A9P06702 114 aaKnown RBP7.65□□□□□ -1.19
COLCA1-205ENST00000620864 SMARCA1P28370 1054 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 ARL4AP40617 200 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 KRT6CP48668 564 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 ZBED6P86452 979 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 TMPRSS15P98073 1019 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 DMP1Q13316 513 aaPredicted RBP7.65□□□□□ -1.19
COLCA1-205ENST00000620864 PNOCQ13519 176 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 USH1GQ495M9 461 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 TSHZ3Q63HK5 1081 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 COA7Q96BR5 231 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 RUBCNLQ9H714 662 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 PARVGQ9HBI0 331 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 NSMCE4AQ9NXX6 385 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 SORBS3O60504 671 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 HIC1Q14526 733 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 TBC1D10BQ4KMP7 808 aaPredicted RBP7.65□□□□□ -1.19
COLCA1-205ENST00000620864 FAM178BQ8IXR5 827 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 PLBD2Q8NHP8 589 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 RMDN1Q96DB5 314 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 SH3GL1Q99961 368 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 ADPGKQ9BRR6 497 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 WWP1Q9H0M0 922 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 AP5M1Q9H0R1 490 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 PANK4Q9NVE7 773 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 H0YC42 278 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 TJP3O95049 919 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 APOA4P06727 396 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 POLR2FP61218 127 aaKnown RBP7.65□□□□□ -1.19
COLCA1-205ENST00000620864 TMEM259Q4ZIN3 620 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 RASSF3Q86WH2 238 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 NT5C1BQ96P26 610 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 MAGEB5Q9BZ81 275 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 EPC1Q9H2F5 836 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms