RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 PDE6AP16499 860 aa9.04□□□□□ -0.96
CBWD1-228ENST00000619157 DLG4P78352 724 aa9.04□□□□□ -0.96
CBWD1-228ENST00000619157 NOL9Q5SY16 702 aaKnown RBP9.04□□□□□ -0.96
CBWD1-228ENST00000619157 TTBK2Q6IQ55 1244 aa9.04□□□□□ -0.96
CBWD1-228ENST00000619157 CCDC84Q86UT8 332 aaPredicted RBP9.04□□□□□ -0.96
CBWD1-228ENST00000619157 MAPKAPK5Q8IW41 473 aa9.04□□□□□ -0.96
CBWD1-228ENST00000619157 EXOC6Q8TAG9 804 aa9.04□□□□□ -0.96
CBWD1-228ENST00000619157 PIWIL2Q8TC59 973 aaKnown RBP9.04□□□□□ -0.96
CBWD1-228ENST00000619157 DNAJC2Q99543 621 aaKnown RBP9.04□□□□□ -0.96
CBWD1-228ENST00000619157 DUSP15Q9H1R2 295 aaPredicted RBP9.04□□□□□ -0.96
CBWD1-228ENST00000619157 TJP2Q9UDY2 1190 aa9.04□□□□□ -0.96
CBWD1-228ENST00000619157 DDX60LQ5H9U9 1706 aaKnown RBP9.04□□□□□ -0.96
CBWD1-228ENST00000619157 CENPFP49454 3210 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 FOCADQ5VW36 1801 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 CASP8AP2Q9UKL3 1982 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 BRCA2P51587 3418 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 MANSC4A6NHS7 340 aaPredicted RBP9.03□□□□□ -0.96
CBWD1-228ENST00000619157 MAP4K4O95819 1239 aaPredicted RBP9.03□□□□□ -0.96
CBWD1-228ENST00000619157 SRFP11831 508 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 EGR3Q06889 387 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 SREBF2Q12772 1141 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 DCAF15Q66K64 600 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 ERO1BQ86YB8 467 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 FAM43AQ8N2R8 423 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 RETREG2Q8NC44 543 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 TGFBRAP1Q8WUH2 860 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 ZNF296Q8WUU4 475 aaPredicted RBP9.03□□□□□ -0.96
CBWD1-228ENST00000619157 HAUS7Q99871 368 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 PAG1Q9NWQ8 432 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 DUSP13Q9UII6 198 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 SUPT16HQ9Y5B9 1047 aaKnown RBP9.03□□□□□ -0.96
CBWD1-228ENST00000619157 ZNF532Q9HCE3 1301 aa9.03□□□□□ -0.96
CBWD1-228ENST00000619157 CCL15-CCL14A0A0B4J2E2 113 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 SMIM22K7EJ46 135 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 IGSF3O75054 1194 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 ZGLP1P0C6A0 271 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 ADD2P35612 726 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 MAP3K12Q12852 859 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 PPIL2Q13356 520 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 HDAC1Q13547 482 aaPredicted RBP9.02□□□□□ -0.97
CBWD1-228ENST00000619157 CCL15Q16663 113 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 GAB4Q2WGN9 574 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 SLC4A8Q2Y0W8 1093 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 METTL16Q86W50 562 aaKnown RBP9.02□□□□□ -0.97
CBWD1-228ENST00000619157 ZSCAN29Q8IWY8 852 aaPredicted RBP9.02□□□□□ -0.97
CBWD1-228ENST00000619157 LCORLQ8N3X6 602 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 SGPP1Q9BX95 441 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 SLC6A17Q9H1V8 727 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 C12orf49Q9H741 205 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 SAP30BPQ9UHR5 308 aaKnown RBP9.02□□□□□ -0.97
CBWD1-228ENST00000619157 PALD1Q9ULE6 856 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 PCDHB5Q9Y5E4 795 aa9.02□□□□□ -0.97
CBWD1-228ENST00000619157 PHIPQ8WWQ0 1821 aa9.01□□□□□ -0.97
CBWD1-228ENST00000619157 BTBD19C9JJ37 291 aa9.01□□□□□ -0.97
CBWD1-228ENST00000619157 PRKAB2O43741 272 aa9.01□□□□□ -0.97
CBWD1-228ENST00000619157 BAG3O95817 575 aa9.01□□□□□ -0.97
CBWD1-228ENST00000619157 IGHDP01880 384 aa9.01□□□□□ -0.97
CBWD1-228ENST00000619157 PGRP06401 933 aa9.01□□□□□ -0.97
CBWD1-228ENST00000619157 ETV3P41162 512 aa9.01□□□□□ -0.97
CBWD1-228ENST00000619157 PPATQ06203 517 aa9.01□□□□□ -0.97
CBWD1-228ENST00000619157 CRHR2Q13324 411 aa9.01□□□□□ -0.97
CBWD1-228ENST00000619157 SLC9C2Q5TAH2 1124 aa9.01□□□□□ -0.97
CBWD1-228ENST00000619157 SCYL3Q8IZE3 742 aa9.01□□□□□ -0.97
CBWD1-228ENST00000619157 PDZD8Q8NEN9 1154 aa9.01□□□□□ -0.97
CBWD1-228ENST00000619157 BAHD1Q8TBE0 780 aaPredicted RBP9.01□□□□□ -0.97
CBWD1-228ENST00000619157 HOOK2Q96ED9 719 aa9.01□□□□□ -0.97
CBWD1-228ENST00000619157 TMEM87BQ96K49 555 aa9.01□□□□□ -0.97
CBWD1-228ENST00000619157 ECHDC1Q9NTX5 307 aa9.01□□□□□ -0.97
CBWD1-228ENST00000619157 CNOT6Q9ULM6 557 aaKnown RBP9.01□□□□□ -0.97
CBWD1-228ENST00000619157 DOCK1Q14185 1865 aa9□□□□□ -0.97
CBWD1-228ENST00000619157 GFRA2O00451 464 aa9□□□□□ -0.97
CBWD1-228ENST00000619157 PLCD1P51178 756 aa9□□□□□ -0.97
CBWD1-228ENST00000619157 GALK1P51570 392 aa9□□□□□ -0.97
CBWD1-228ENST00000619157 GTF2A2P52657 109 aa9□□□□□ -0.97
CBWD1-228ENST00000619157 INHBEP58166 350 aa9□□□□□ -0.97
CBWD1-228ENST00000619157 TTF1Q15361 905 aaPredicted RBP9□□□□□ -0.97
CBWD1-228ENST00000619157 IRF2BP1Q8IU81 584 aa9□□□□□ -0.97
CBWD1-228ENST00000619157 DNAJB8Q8NHS0 232 aa9□□□□□ -0.97
CBWD1-228ENST00000619157 SDR42E1Q8WUS8 393 aa9□□□□□ -0.97
CBWD1-228ENST00000619157 PUS7LQ9H0K6 701 aaKnown RBP9□□□□□ -0.97
CBWD1-228ENST00000619157 ARMT1Q9H993 441 aa9□□□□□ -0.97
CBWD1-228ENST00000619157 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9□□□□□ -0.97
CBWD1-228ENST00000619157 FAM8A1Q9UBU6 413 aa9□□□□□ -0.97
CBWD1-228ENST00000619157 AFG3L2Q9Y4W6 797 aa9□□□□□ -0.97
CBWD1-228ENST00000619157 ADGRA2Q96PE1 1338 aa9□□□□□ -0.97
CBWD1-228ENST00000619157 AK9Q5TCS8 1911 aa8.99□□□□□ -0.97
CBWD1-228ENST00000619157 GIPC1O14908 333 aa8.99□□□□□ -0.97
CBWD1-228ENST00000619157 FOXD2O60548 495 aaPredicted RBP8.99□□□□□ -0.97
CBWD1-228ENST00000619157 CTNND1O60716 968 aaKnown RBP8.99□□□□□ -0.97
CBWD1-228ENST00000619157 CYP2D6P10635 497 aa8.99□□□□□ -0.97
CBWD1-228ENST00000619157 IRX6P78412 446 aaPredicted RBP8.99□□□□□ -0.97
CBWD1-228ENST00000619157 SNAPC2Q13487 334 aa8.99□□□□□ -0.97
CBWD1-228ENST00000619157 ALG1LQ6GMV1 187 aa8.99□□□□□ -0.97
CBWD1-228ENST00000619157 SV2BQ7L1I2 683 aa8.99□□□□□ -0.97
CBWD1-228ENST00000619157 MRPL41Q8IXM3 137 aaKnown RBP8.99□□□□□ -0.97
CBWD1-228ENST00000619157 SMC5Q8IY18 1101 aa8.99□□□□□ -0.97
CBWD1-228ENST00000619157 INTS4Q96HW7 963 aaKnown RBP8.99□□□□□ -0.97
CBWD1-228ENST00000619157 ABHD8Q96I13 439 aa8.99□□□□□ -0.97
CBWD1-228ENST00000619157 TRIT1Q9H3H1 467 aaKnown RBP8.99□□□□□ -0.97
CBWD1-228ENST00000619157 PI4KBQ9UBF8 816 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms