RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 LRRC4CQ9HCJ2 640 aa22.2■■□□□ 1.14
NEK3-208ENST00000618534 NOVA2Q9UNW9 492 aaKnown RBP22.2■■□□□ 1.14
NEK3-208ENST00000618534 ADAMTSL1Q8N6G6 1762 aa22.2■■□□□ 1.14
NEK3-208ENST00000618534 FAM86B1E9PN63 330 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 TRAPPC3O43617 180 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 EVI5O60447 810 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 FAM86B2P0C5J1 330 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 FERP16591 822 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 PPP2R2AP63151 447 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 SEC14L1Q92503 715 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 TRIM51Q9BSJ1 452 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 VCPKMTQ9H867 229 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 NR2E1Q9Y466 385 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 FAM170AA1A519 330 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 BUB1BO60566 1050 aaPredicted RBP22.19■■□□□ 1.14
NEK3-208ENST00000618534 TBCAO75347 108 aaKnown RBP22.19■■□□□ 1.14
NEK3-208ENST00000618534 FGGP02679 453 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 NPEPPSP55786 919 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 DHX9Q08211 1270 aaKnown RBP22.19■■□□□ 1.14
NEK3-208ENST00000618534 QPCTQ16769 361 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 GLYCTKQ8IVS8 523 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 AMFRQ9UKV5 643 aa22.19■■□□□ 1.14
NEK3-208ENST00000618534 STAT1P42224 750 aa22.18■■□□□ 1.14
NEK3-208ENST00000618534 ACTN3Q08043 901 aaPredicted RBP22.18■■□□□ 1.14
NEK3-208ENST00000618534 Q4G0T1 1027 aa22.18■■□□□ 1.14
NEK3-208ENST00000618534 SLC30A5Q8TAD4 765 aa22.18■■□□□ 1.14
NEK3-208ENST00000618534 TRIM31Q9BZY9 425 aa22.18■■□□□ 1.14
NEK3-208ENST00000618534 DDX20Q9UHI6 824 aaKnown RBP22.18■■□□□ 1.14
NEK3-208ENST00000618534 IGSF9BQ9UPX0 1349 aa22.18■■□□□ 1.14
NEK3-208ENST00000618534 GTPBP10A4D1E9 387 aaKnown RBP22.18■■□□□ 1.14
NEK3-208ENST00000618534 SFI1A8K8P3 1242 aa22.18■■□□□ 1.14
NEK3-208ENST00000618534 F8VZ95 297 aa22.18■■□□□ 1.14
NEK3-208ENST00000618534 BACH1O14867 736 aa22.18■■□□□ 1.14
NEK3-208ENST00000618534 TBX3O15119 743 aa22.18■■□□□ 1.14
NEK3-208ENST00000618534 BBOX1O75936 387 aa22.18■■□□□ 1.14
NEK3-208ENST00000618534 HLA-DOAP06340 250 aa22.18■■□□□ 1.14
NEK3-208ENST00000618534 POLD1P28340 1107 aa22.18■■□□□ 1.14
NEK3-208ENST00000618534 POU5F1Q01860 360 aaKnown RBP22.18■■□□□ 1.14
NEK3-208ENST00000618534 CDC42EP5Q6NZY7 148 aa22.18■■□□□ 1.14
NEK3-208ENST00000618534 BORCS6Q96GS4 357 aa22.18■■□□□ 1.14
NEK3-208ENST00000618534 UTP11Q9Y3A2 253 aaKnown RBP22.18■■□□□ 1.14
NEK3-208ENST00000618534 FAM196BA6NMK8 535 aa22.17■■□□□ 1.14
NEK3-208ENST00000618534 TGFB1I1O43294 461 aa22.17■■□□□ 1.14
NEK3-208ENST00000618534 EEF2P13639 858 aaKnown RBP22.17■■□□□ 1.14
NEK3-208ENST00000618534 MAGOHP61326 146 aaKnown RBP22.17■■□□□ 1.14
NEK3-208ENST00000618534 NFIAQ12857 509 aa22.17■■□□□ 1.14
NEK3-208ENST00000618534 KRT71Q3SY84 523 aa22.17■■□□□ 1.14
NEK3-208ENST00000618534 DCAF12L1Q5VU92 463 aa22.17■■□□□ 1.14
NEK3-208ENST00000618534 CCDC13Q8IYE1 715 aa22.17■■□□□ 1.14
NEK3-208ENST00000618534 SLC35G2Q8TBE7 412 aa22.17■■□□□ 1.14
NEK3-208ENST00000618534 MAGOHBQ96A72 148 aaKnown RBP22.17■■□□□ 1.14
NEK3-208ENST00000618534 DNAJC18Q9H819 358 aa22.17■■□□□ 1.14
NEK3-208ENST00000618534 YY1AP1Q9H869 796 aa22.17■■□□□ 1.14
NEK3-208ENST00000618534 FAM114A2Q9NRY5 505 aa22.17■■□□□ 1.14
NEK3-208ENST00000618534 PPP1R9AQ9ULJ8 1098 aa22.17■■□□□ 1.14
NEK3-208ENST00000618534 ZMYM2Q9UBW7 1377 aa22.17■■□□□ 1.14
NEK3-208ENST00000618534 TAL1P17542 331 aaPredicted RBP22.17■■□□□ 1.14
NEK3-208ENST00000618534 SLFN13Q68D06 897 aa22.17■■□□□ 1.14
NEK3-208ENST00000618534 ATP8B4Q8TF62 1192 aa22.17■■□□□ 1.14
NEK3-208ENST00000618534 VAV3Q9UKW4 847 aa22.17■■□□□ 1.14
NEK3-208ENST00000618534 NCANO14594 1321 aa22.16■■□□□ 1.14
NEK3-208ENST00000618534 DDX3YO15523 660 aaKnown RBP22.16■■□□□ 1.14
NEK3-208ENST00000618534 ABCB4P21439 1286 aa22.16■■□□□ 1.14
NEK3-208ENST00000618534 SOX5P35711 763 aa22.16■■□□□ 1.14
NEK3-208ENST00000618534 USH1GQ495M9 461 aa22.16■■□□□ 1.14
NEK3-208ENST00000618534 ZFPM1Q8IX07 1006 aa22.16■■□□□ 1.14
NEK3-208ENST00000618534 FAM186BQ8IYM0 893 aa22.16■■□□□ 1.14
NEK3-208ENST00000618534 RAPGEF5Q92565 580 aa22.16■■□□□ 1.14
NEK3-208ENST00000618534 RABGAP1Q9Y3P9 1069 aa22.16■■□□□ 1.14
NEK3-208ENST00000618534 MSH4O15457 936 aa22.16■■□□□ 1.14
NEK3-208ENST00000618534 SERPINB2P05120 415 aa22.16■■□□□ 1.14
NEK3-208ENST00000618534 ADAT2Q7Z6V5 191 aaKnown RBP22.16■■□□□ 1.14
NEK3-208ENST00000618534 RFFLQ8WZ73 363 aa22.16■■□□□ 1.14
NEK3-208ENST00000618534 RGL1Q9NZL6 768 aa22.16■■□□□ 1.14
NEK3-208ENST00000618534 TTC7AQ9ULT0 858 aaPredicted RBP22.16■■□□□ 1.14
NEK3-208ENST00000618534 LTBP1Q14766 1721 aa22.15■■□□□ 1.14
NEK3-208ENST00000618534 COPB2P35606 906 aa22.15■■□□□ 1.14
NEK3-208ENST00000618534 PRPF4BQ13523 1007 aaKnown RBP22.15■■□□□ 1.14
NEK3-208ENST00000618534 C3orf20Q8ND61 904 aa22.15■■□□□ 1.14
NEK3-208ENST00000618534 CYP2W1Q8TAV3 490 aa22.15■■□□□ 1.14
NEK3-208ENST00000618534 DCAF4Q8WV16 495 aa22.15■■□□□ 1.14
NEK3-208ENST00000618534 ATP8A1Q9Y2Q0 1164 aa22.15■■□□□ 1.14
NEK3-208ENST00000618534 EML1O00423 815 aa22.15■■□□□ 1.14
NEK3-208ENST00000618534 PAEPP09466 180 aa22.15■■□□□ 1.14
NEK3-208ENST00000618534 NMT1P30419 496 aaKnown RBP22.15■■□□□ 1.14
NEK3-208ENST00000618534 SREBF1P36956 1147 aa22.15■■□□□ 1.14
NEK3-208ENST00000618534 DRAP1Q14919 205 aaPredicted RBP22.15■■□□□ 1.14
NEK3-208ENST00000618534 SPRED3Q2MJR0 410 aa22.15■■□□□ 1.14
NEK3-208ENST00000618534 CCDC121Q6ZUS5 278 aa22.15■■□□□ 1.14
NEK3-208ENST00000618534 FAM20AQ96MK3 541 aa22.15■■□□□ 1.14
NEK3-208ENST00000618534 FMO2Q99518 471 aa22.15■■□□□ 1.14
NEK3-208ENST00000618534 EIF2AK1Q9BQI3 630 aaKnown RBP22.15■■□□□ 1.14
NEK3-208ENST00000618534 QSER1Q2KHR3 1735 aa22.14■■□□□ 1.14
NEK3-208ENST00000618534 SPDYE3A6NKU9 549 aa22.14■■□□□ 1.13
NEK3-208ENST00000618534 EYA4O95677 639 aa22.14■■□□□ 1.13
NEK3-208ENST00000618534 TMEM253P0C7T8 217 aa22.14■■□□□ 1.13
NEK3-208ENST00000618534 LMNB1P20700 586 aa22.14■■□□□ 1.13
NEK3-208ENST00000618534 PPATQ06203 517 aa22.14■■□□□ 1.13
NEK3-208ENST00000618534 ZC2HC1CQ53FD0 456 aaPredicted RBP22.14■■□□□ 1.13
NEK3-208ENST00000618534 ARHGEF26Q96DR7 871 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms