RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 PLS3P13797 630 aa13□□□□□ -0.33
PDPN-211ENST00000617617 NCKAP1LP55160 1127 aa13□□□□□ -0.33
PDPN-211ENST00000617617 LRRC63Q05C16 580 aa13□□□□□ -0.33
PDPN-211ENST00000617617 DHX8Q14562 1220 aaKnown RBP13□□□□□ -0.33
PDPN-211ENST00000617617 DGKDQ16760 1214 aa13□□□□□ -0.33
PDPN-211ENST00000617617 ZCWPW2Q504Y3 356 aa13□□□□□ -0.33
PDPN-211ENST00000617617 TMEM63BQ5T3F8 832 aa13□□□□□ -0.33
PDPN-211ENST00000617617 LUZP1Q86V48 1076 aa13□□□□□ -0.33
PDPN-211ENST00000617617 TRPV1Q8NER1 839 aa13□□□□□ -0.33
PDPN-211ENST00000617617 JPH2Q9BR39 696 aaPredicted RBP13□□□□□ -0.33
PDPN-211ENST00000617617 HIP1RO75146 1068 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 MAFO75444 373 aaPredicted RBP12.99□□□□□ -0.33
PDPN-211ENST00000617617 FAM13AO94988 1023 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 CPT1AP50416 773 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 GJA9P57773 515 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 SNRPFP62306 86 aaKnown RBP12.99□□□□□ -0.33
PDPN-211ENST00000617617 TPM4P67936 248 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 CDKAL1Q5VV42 579 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 TTI2Q6NXR4 508 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 MYOCDQ8IZQ8 938 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 AOPEPQ8N6M6 819 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 P2RX5Q93086 422 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 CEP170P1Q96L14 293 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 EVPLQ92817 2033 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 CYP2C19P33261 490 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 HERC4Q5GLZ8 1057 aaPredicted RBP12.99□□□□□ -0.33
PDPN-211ENST00000617617 STXBP4Q6ZWJ1 553 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 CD99L2Q8TCZ2 262 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 AFG1LQ8WV93 481 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 NELFBQ8WX92 580 aa12.99□□□□□ -0.33
PDPN-211ENST00000617617 SEPT9Q9UHD8 586 aaPredicted RBP12.99□□□□□ -0.33
PDPN-211ENST00000617617 ZNF215Q9UL58 517 aaPredicted RBP12.99□□□□□ -0.33
PDPN-211ENST00000617617 GOLGA6L19H0YKK7 550 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 HAS3O00219 553 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 SEPT4O43236 478 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 HMGCRP04035 888 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 IDEP14735 1019 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 CST5P28325 142 aaPredicted RBP12.98□□□□□ -0.33
PDPN-211ENST00000617617 ARL2P36404 184 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 PLA2G4FQ68DD2 849 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 ISM2Q6H9L7 571 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 ZNF720Q7Z2F6 126 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 SFR1Q86XK3 245 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 SCFD1Q8WVM8 642 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 KCTD10Q9H3F6 313 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 THAP9Q9H5L6 903 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 XPNPEP1Q9NQW7 623 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 LARSQ9P2J5 1176 aaKnown RBP12.98□□□□□ -0.33
PDPN-211ENST00000617617 CGNQ9P2M7 1197 aaKnown RBP12.98□□□□□ -0.33
PDPN-211ENST00000617617 PHLPP2Q6ZVD8 1323 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 BECN2A8MW95 431 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 H0YCG3 227 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 F2P00734 622 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 MCCD1P59942 119 aaPredicted RBP12.98□□□□□ -0.33
PDPN-211ENST00000617617 EDRF1Q3B7T1 1238 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 TLK2Q86UE8 772 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 LINC01465Q8N7H1 131 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 SLAIN1Q8ND83 568 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 CCDC43Q96MW1 224 aaKnown RBP12.98□□□□□ -0.33
PDPN-211ENST00000617617 TRAF3IP3Q9Y228 551 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 RSPH10B2B2RC85 870 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 RSPH10BP0C881 870 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 NPEPPSP55786 919 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 MYBPC2Q14324 1141 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 EMC2Q15006 297 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 UTP14CQ5TAP6 766 aaKnown RBP12.98□□□□□ -0.33
PDPN-211ENST00000617617 SMYD4Q8IYR2 804 aaPredicted RBP12.98□□□□□ -0.33
PDPN-211ENST00000617617 RNF214Q8ND24 703 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 PDLIM2Q96JY6 352 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 SLC39A2Q9NP94 309 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 CTNND2Q9UQB3 1225 aa12.98□□□□□ -0.33
PDPN-211ENST00000617617 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.97□□□□□ -0.33
PDPN-211ENST00000617617 CDC25BP30305 580 aa12.97□□□□□ -0.33
PDPN-211ENST00000617617 HOXC8P31273 242 aa12.97□□□□□ -0.33
PDPN-211ENST00000617617 C1QTNF8P60827 252 aa12.97□□□□□ -0.33
PDPN-211ENST00000617617 GTF2BQ00403 316 aa12.97□□□□□ -0.33
PDPN-211ENST00000617617 POU5F1BQ06416 359 aa12.97□□□□□ -0.33
PDPN-211ENST00000617617 ZNF296Q8WUU4 475 aaPredicted RBP12.97□□□□□ -0.33
PDPN-211ENST00000617617 TCP11Q8WWU5 503 aa12.97□□□□□ -0.33
PDPN-211ENST00000617617 SEMA6BQ9H3T3 888 aa12.97□□□□□ -0.33
PDPN-211ENST00000617617 WBP1LQ9NX94 342 aa12.97□□□□□ -0.33
PDPN-211ENST00000617617 LRRC10BA6NIK2 292 aa12.97□□□□□ -0.33
PDPN-211ENST00000617617 PDXKO00764 312 aa12.97□□□□□ -0.33
PDPN-211ENST00000617617 MAGEB2O15479 319 aa12.97□□□□□ -0.33
PDPN-211ENST00000617617 USO1O60763 962 aaKnown RBP12.97□□□□□ -0.33
PDPN-211ENST00000617617 SP4Q02446 784 aa12.97□□□□□ -0.33
PDPN-211ENST00000617617 CACNB2Q08289 660 aaPredicted RBP12.97□□□□□ -0.33
PDPN-211ENST00000617617 BRDTQ58F21 947 aaPredicted RBP12.97□□□□□ -0.33
PDPN-211ENST00000617617 PRAMEF19Q5SWL8 479 aa12.97□□□□□ -0.33
PDPN-211ENST00000617617 GLG1Q92896 1179 aa12.97□□□□□ -0.33
PDPN-211ENST00000617617 DUSP9Q99956 384 aaKnown RBP12.97□□□□□ -0.33
PDPN-211ENST00000617617 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
PDPN-211ENST00000617617 HOXD13P35453 343 aa12.96□□□□□ -0.33
PDPN-211ENST00000617617 SPAG1Q07617 926 aa12.96□□□□□ -0.33
PDPN-211ENST00000617617 PPP2R5AQ15172 486 aa12.96□□□□□ -0.33
PDPN-211ENST00000617617 IER5Q5VY09 327 aa12.96□□□□□ -0.33
PDPN-211ENST00000617617 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.96□□□□□ -0.33
PDPN-211ENST00000617617 C12orf56Q8IXR9 622 aa12.96□□□□□ -0.33
PDPN-211ENST00000617617 MYCT1Q8N699 235 aa12.96□□□□□ -0.33
PDPN-211ENST00000617617 CEP63Q96MT8 703 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms