RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 C6orf222P0C671 652 aaPredicted RBP22.68■■□□□ 1.22
SDHA-220ENST00000617470 PPP1R2P41236 205 aa22.68■■□□□ 1.22
SDHA-220ENST00000617470 IRX5P78411 483 aaPredicted RBP22.68■■□□□ 1.22
SDHA-220ENST00000617470 SPAG1Q07617 926 aa22.68■■□□□ 1.22
SDHA-220ENST00000617470 CENPPQ6IPU0 288 aa22.68■■□□□ 1.22
SDHA-220ENST00000617470 MIS18BP1Q6P0N0 1132 aa22.68■■□□□ 1.22
SDHA-220ENST00000617470 PPTC7Q8NI37 304 aa22.68■■□□□ 1.22
SDHA-220ENST00000617470 SEPT1Q8WYJ6 367 aa22.68■■□□□ 1.22
SDHA-220ENST00000617470 EMID1Q96A84 441 aaPredicted RBP22.68■■□□□ 1.22
SDHA-220ENST00000617470 GPR20Q99678 358 aa22.68■■□□□ 1.22
SDHA-220ENST00000617470 SRRTQ9BXP5 876 aaKnown RBP22.68■■□□□ 1.22
SDHA-220ENST00000617470 RNF208Q9H0X6 261 aa22.68■■□□□ 1.22
SDHA-220ENST00000617470 THAP9Q9H5L6 903 aa22.68■■□□□ 1.22
SDHA-220ENST00000617470 SPC25Q9HBM1 224 aa22.68■■□□□ 1.22
SDHA-220ENST00000617470 Q9Y3F1 56 aa22.68■■□□□ 1.22
SDHA-220ENST00000617470 BACH1O14867 736 aa22.67■■□□□ 1.22
SDHA-220ENST00000617470 PSAPP07602 524 aa22.67■■□□□ 1.22
SDHA-220ENST00000617470 CCL5P13501 91 aa22.67■■□□□ 1.22
SDHA-220ENST00000617470 TCF7P36402 384 aaPredicted RBP22.67■■□□□ 1.22
SDHA-220ENST00000617470 COPB1P53618 953 aaKnown RBP22.67■■□□□ 1.22
SDHA-220ENST00000617470 PSMD2Q13200 908 aa22.67■■□□□ 1.22
SDHA-220ENST00000617470 UTP14CQ5TAP6 766 aaKnown RBP22.67■■□□□ 1.22
SDHA-220ENST00000617470 SYT2Q8N9I0 419 aaPredicted RBP22.67■■□□□ 1.22
SDHA-220ENST00000617470 PANK4Q9NVE7 773 aa22.67■■□□□ 1.22
SDHA-220ENST00000617470 PCDHA2Q9Y5H9 948 aa22.67■■□□□ 1.22
SDHA-220ENST00000617470 GSTTP1A0A1W2PQM5 241 aa22.67■■□□□ 1.22
SDHA-220ENST00000617470 BEX3Q00994 111 aa22.67■■□□□ 1.22
SDHA-220ENST00000617470 EPHA7Q15375 998 aa22.67■■□□□ 1.22
SDHA-220ENST00000617470 GUF1Q8N442 669 aaKnown RBP22.67■■□□□ 1.22
SDHA-220ENST00000617470 FGFBP2Q9BYJ0 223 aa22.67■■□□□ 1.22
SDHA-220ENST00000617470 MCOLN1Q9GZU1 580 aa22.67■■□□□ 1.22
SDHA-220ENST00000617470 TMX1Q9H3N1 280 aa22.67■■□□□ 1.22
SDHA-220ENST00000617470 TAB2Q9NYJ8 693 aa22.67■■□□□ 1.22
SDHA-220ENST00000617470 DNM3Q9UQ16 869 aa22.67■■□□□ 1.22
SDHA-220ENST00000617470 FRMD3A2A2Y4 597 aa22.66■■□□□ 1.22
SDHA-220ENST00000617470 MSCO60682 206 aa22.66■■□□□ 1.22
SDHA-220ENST00000617470 SLITRK3O94933 977 aa22.66■■□□□ 1.22
SDHA-220ENST00000617470 CACNB1Q02641 598 aaPredicted RBP22.66■■□□□ 1.22
SDHA-220ENST00000617470 BRDTQ58F21 947 aaPredicted RBP22.66■■□□□ 1.22
SDHA-220ENST00000617470 SWSAP1Q6NVH7 229 aa22.66■■□□□ 1.22
SDHA-220ENST00000617470 ABHD15Q6UXT9 468 aa22.66■■□□□ 1.22
SDHA-220ENST00000617470 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.66■■□□□ 1.22
SDHA-220ENST00000617470 BANK1Q8NDB2 785 aa22.66■■□□□ 1.22
SDHA-220ENST00000617470 DYDC2Q96IM9 177 aa22.66■■□□□ 1.22
SDHA-220ENST00000617470 VPS16Q9H269 839 aa22.66■■□□□ 1.22
SDHA-220ENST00000617470 BICDL2A1A5D9 508 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 SUPT20HL2P0C7V6 817 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 CPT1AP50416 773 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 LRRC41Q15345 812 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 TRMT1LQ7Z2T5 733 aaKnown RBP22.65■■□□□ 1.22
SDHA-220ENST00000617470 TPH2Q8IWU9 490 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 CSGALNACT2Q8N6G5 542 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 RDM1Q8NG50 284 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 BMP2KQ9NSY1 1161 aaPredicted RBP22.65■■□□□ 1.22
SDHA-220ENST00000617470 GABBR1Q9UBS5 961 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 MMP3P08254 477 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 GJA9P57773 515 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 RAD51AP2Q09MP3 1159 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 CTTNQ14247 550 aaKnown RBP22.65■■□□□ 1.22
SDHA-220ENST00000617470 FSCN1Q16658 493 aaKnown RBP22.65■■□□□ 1.22
SDHA-220ENST00000617470 TC2NQ8N9U0 490 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 EEF2KMTQ96G04 330 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 ZNF333Q96JL9 665 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 DEFB118Q96PH6 123 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 TUFT1Q9NNX1 390 aa22.65■■□□□ 1.22
SDHA-220ENST00000617470 MYADML2A6NDP7 307 aa22.64■■□□□ 1.21
SDHA-220ENST00000617470 USP27XA6NNY8 438 aa22.64■■□□□ 1.21
SDHA-220ENST00000617470 N4BP3O15049 544 aa22.64■■□□□ 1.21
SDHA-220ENST00000617470 ATG7O95352 703 aa22.64■■□□□ 1.21
SDHA-220ENST00000617470 GIT2Q14161 759 aa22.64■■□□□ 1.21
SDHA-220ENST00000617470 DGKDQ16760 1214 aa22.64■■□□□ 1.21
SDHA-220ENST00000617470 FILIP1LQ4L180 1135 aa22.64■■□□□ 1.21
SDHA-220ENST00000617470 GNASQ5JWF2 1037 aa22.64■■□□□ 1.21
SDHA-220ENST00000617470 TMEM139Q8IV31 216 aa22.64■■□□□ 1.21
SDHA-220ENST00000617470 CCDC60Q8IWA6 550 aaPredicted RBP22.64■■□□□ 1.21
SDHA-220ENST00000617470 NOC3LQ8WTT2 800 aaKnown RBP22.64■■□□□ 1.21
SDHA-220ENST00000617470 GLG1Q92896 1179 aa22.64■■□□□ 1.21
SDHA-220ENST00000617470 AZI2Q9H6S1 392 aa22.64■■□□□ 1.21
SDHA-220ENST00000617470 WRAP73Q9P2S5 460 aaPredicted RBP22.64■■□□□ 1.21
SDHA-220ENST00000617470 A6NJR5 290 aa22.63■■□□□ 1.21
SDHA-220ENST00000617470 EYA4O95677 639 aa22.63■■□□□ 1.21
SDHA-220ENST00000617470 P4HBP07237 508 aaKnown RBP22.63■■□□□ 1.21
SDHA-220ENST00000617470 EEF1GP26641 437 aaKnown RBP22.63■■□□□ 1.21
SDHA-220ENST00000617470 FAM26FQ5R3K3 315 aa22.63■■□□□ 1.21
SDHA-220ENST00000617470 CEP135Q66GS9 1140 aa22.63■■□□□ 1.21
SDHA-220ENST00000617470 TRIM50Q86XT4 487 aa22.63■■□□□ 1.21
SDHA-220ENST00000617470 ARMC5Q96C12 935 aa22.63■■□□□ 1.21
SDHA-220ENST00000617470 ZNF302Q9NR11 478 aa22.63■■□□□ 1.21
SDHA-220ENST00000617470 PPFIA4O75335 1185 aa22.63■■□□□ 1.21
SDHA-220ENST00000617470 MYL3P08590 195 aa22.63■■□□□ 1.21
SDHA-220ENST00000617470 ZNF286BP0CG31 522 aa22.63■■□□□ 1.21
SDHA-220ENST00000617470 FAM160B1Q5W0V3 765 aa22.63■■□□□ 1.21
SDHA-220ENST00000617470 LHX8Q68G74 356 aa22.63■■□□□ 1.21
SDHA-220ENST00000617470 CCDC65Q8IXS2 484 aa22.63■■□□□ 1.21
SDHA-220ENST00000617470 LXNQ9BS40 222 aa22.63■■□□□ 1.21
SDHA-220ENST00000617470 UPF3AQ9H1J1 476 aaKnown RBP22.63■■□□□ 1.21
SDHA-220ENST00000617470 BHMT2Q9H2M3 363 aa22.63■■□□□ 1.21
SDHA-220ENST00000617470 PAK6Q9NQU5 681 aaPredicted RBP22.63■■□□□ 1.21
SDHA-220ENST00000617470 ZBTB39O15060 712 aa22.62■■□□□ 1.21
SDHA-220ENST00000617470 UGCGQ16739 394 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms