RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 FOSP01100 380 aaPredicted RBP9.72□□□□□ -0.85
GPC6-202ENST00000617456 ATF7P17544 494 aaPredicted RBP9.72□□□□□ -0.85
GPC6-202ENST00000617456 ITGB5P18084 799 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 TECP42680 631 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 APOBRQ0VD83 1088 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 NFX1Q12986 1120 aaKnown RBP9.72□□□□□ -0.85
GPC6-202ENST00000617456 PTPN21Q16825 1174 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 PLPP4Q5VZY2 271 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 MCTP2Q6DN12 878 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 PPP1R18Q6NYC8 613 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 THNSL1Q8IYQ7 743 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 CRIPAKQ8N1N5 446 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 SRBD1Q8N5C6 995 aaKnown RBP9.72□□□□□ -0.85
GPC6-202ENST00000617456 SUSD6Q92537 303 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 KCNB2Q92953 911 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 GPRASP2Q96D09 838 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 CELF4Q9BZC1 486 aaKnown RBP9.72□□□□□ -0.85
GPC6-202ENST00000617456 IRF2BPLQ9H1B7 796 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 TMX1Q9H3N1 280 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 AZI2Q9H6S1 392 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 PSTPIP2Q9H939 334 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 TMEM260Q9NX78 707 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 PCDHB7Q9Y5E2 793 aa9.72□□□□□ -0.85
GPC6-202ENST00000617456 KIAA1671Q9BY89 1806 aa9.71□□□□□ -0.85
GPC6-202ENST00000617456 CCDC196A0A1B0GTZ2 297 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 MGEA5O60502 916 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 FGF18O76093 207 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 SARSP49591 514 aaKnown RBP9.71□□□□□ -0.86
GPC6-202ENST00000617456 ERVFC1P60507 584 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 KRT76Q01546 638 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 MTMR1Q13613 665 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 UBE2SQ16763 222 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 FAM102BQ5T8I3 360 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 ANKRD54Q6NXT1 300 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 TMTC3Q6ZXV5 915 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 COLGALT1Q8NBJ5 622 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 ATP8B4Q8TF62 1192 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 TNPO1Q92973 898 aaKnown RBP9.71□□□□□ -0.86
GPC6-202ENST00000617456 PCYT2Q99447 389 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 CDCA3Q99618 268 aaPredicted RBP9.71□□□□□ -0.86
GPC6-202ENST00000617456 MYL10Q9BUA6 226 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 AAASQ9NRG9 546 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 IGSF9BQ9UPX0 1349 aa9.71□□□□□ -0.86
GPC6-202ENST00000617456 KMT2EQ8IZD2 1858 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 DENND3A2RUS2 1198 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 FSCN2O14926 492 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 SRGAP2BP0DMP2 458 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 UBE3AQ05086 875 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 PLCB4Q15147 1175 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 L1TD1Q5T7N2 865 aaKnown RBP9.7□□□□□ -0.86
GPC6-202ENST00000617456 APOA5Q6Q788 366 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 ASCL5Q7RTU5 278 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 KREMEN2Q8NCW0 462 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 RIPOR3Q96MK2 946 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 PPP1R16BQ96T49 567 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 ADAM2Q99965 735 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 S1PR5Q9H228 398 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 CDHR5Q9HBB8 845 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 JPH1Q9HDC5 661 aaPredicted RBP9.7□□□□□ -0.86
GPC6-202ENST00000617456 ENTPD7Q9NQZ7 604 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 TYW1Q9NV66 732 aaKnown RBP9.7□□□□□ -0.86
GPC6-202ENST00000617456 PPP4R2Q9NY27 417 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 CDH22Q9UJ99 828 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 PCDHA2Q9Y5H9 948 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 UBIAD1Q9Y5Z9 338 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 SQORQ9Y6N5 450 aa9.7□□□□□ -0.86
GPC6-202ENST00000617456 hCG_1642624A0A1W2PR95 340 aa9.69□□□□□ -0.86
GPC6-202ENST00000617456 SPDYE3A6NKU9 549 aa9.69□□□□□ -0.86
GPC6-202ENST00000617456 ZBTB43O43298 467 aa9.69□□□□□ -0.86
GPC6-202ENST00000617456 GALR2O43603 387 aaPredicted RBP9.69□□□□□ -0.86
GPC6-202ENST00000617456 RPS6KA5O75582 802 aa9.69□□□□□ -0.86
GPC6-202ENST00000617456 FGFR1P11362 822 aa9.69□□□□□ -0.86
GPC6-202ENST00000617456 ZSCAN20P17040 1043 aaPredicted RBP9.69□□□□□ -0.86
GPC6-202ENST00000617456 SYCE2Q6PIF2 218 aa9.69□□□□□ -0.86
GPC6-202ENST00000617456 MTHFD1LQ6UB35 978 aa9.69□□□□□ -0.86
GPC6-202ENST00000617456 FAM177A1Q8N128 213 aaPredicted RBP9.69□□□□□ -0.86
GPC6-202ENST00000617456 CMTR1Q8N1G2 835 aaKnown RBP9.69□□□□□ -0.86
GPC6-202ENST00000617456 TCF25Q9BQ70 676 aa9.69□□□□□ -0.86
GPC6-202ENST00000617456 AGXT2Q9BYV1 514 aa9.69□□□□□ -0.86
GPC6-202ENST00000617456 SMOC2Q9H3U7 446 aa9.69□□□□□ -0.86
GPC6-202ENST00000617456 PLXNA4Q9HCM2 1894 aa9.69□□□□□ -0.86
GPC6-202ENST00000617456 ERVK-5Q9HDB9 667 aa9.69□□□□□ -0.86
GPC6-202ENST00000617456 RIC8AQ9NPQ8 531 aa9.69□□□□□ -0.86
GPC6-202ENST00000617456 JADE2Q9NQC1 790 aa9.69□□□□□ -0.86
GPC6-202ENST00000617456 SLC9A2Q9UBY0 812 aa9.69□□□□□ -0.86
GPC6-202ENST00000617456 NOC2LQ9Y3T9 749 aaKnown RBP9.69□□□□□ -0.86
GPC6-202ENST00000617456 MYO10Q9HD67 2058 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 SMIM35A0A1B0GVV1 85 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 FSD2A1L4K1 749 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 HIDE1A8MVS5 230 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 C2CD4DB7Z1M9 353 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 REC8O95072 547 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 PLEKHA8P1O95397 391 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 LAG3P18627 525 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 KLRC1P26715 233 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 PSMA5P28066 241 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 HSPA4P34932 840 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 CA8P35219 290 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 SLC26A2P50443 739 aa9.68□□□□□ -0.86
GPC6-202ENST00000617456 STAT5BP51692 787 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms