RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CRACR2AQ9BSW2 395 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 MAD1L1Q9Y6D9 718 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 CAMTA1Q9Y6Y1 1673 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 CLUHO75153 1309 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 CAND1Q86VP6 1230 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 CDCA5Q96FF9 252 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 CCDC134Q9H6E4 229 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 PIN4Q9Y237 131 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 MIGA1Q8NAN2 632 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 SPATA18Q8TC71 538 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 SLC20A1Q8WUM9 679 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 GDAP1L1Q96MZ0 367 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 ZCCHC17Q9NP64 241 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 TACC3Q9Y6A5 838 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 A0A1B0GVL5 298 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 VSTM5A8MXK1 200 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 PATL2C9JE40 543 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 C1QTNF3-AMACRE9PGA6 284 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 PPP2R1AP30153 589 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 RPL10AP62906 217 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 DTHD1Q6ZMT9 781 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 REXO1Q8N1G1 1221 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 TTC30BQ8N4P2 665 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 ZNF577Q9BSK1 485 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 TJP2Q9UDY2 1190 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 AK5Q9Y6K8 562 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 PHF20L1A8MW92 1017 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 GEMIN4P57678 1058 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 PPP1R18Q6NYC8 613 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 LRRC43Q8N309 656 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 NSUN6Q8TEA1 469 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 CTAGE1Q96RT6 745 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 PLCB1Q9NQ66 1216 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 RALBP11234 206 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 EEF2P13639 858 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 KIF23Q02241 960 aaPredicted RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 SYTL3Q4VX76 610 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 FAM102BQ5T8I3 360 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 GET4Q7L5D6 327 aaPredicted RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 GSTA5Q7RTV2 222 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 BCL2L12Q9HB09 334 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 GARSP41250 739 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 OR1G1P47890 313 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 CDR2Q01850 454 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 NOL9Q5SY16 702 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 PDE12Q6L8Q7 609 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 ZNF280DQ6N043 979 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 FAM227BQ96M60 508 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 C16orf45Q96MC5 204 aaPredicted RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 PPP1R2P1Q96PQ5 205 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 BAG1Q99933 345 aaPredicted RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 EFHD1Q9BUP0 239 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 BOLA2Q9H3K6 86 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 ELOVL2Q9NXB9 296 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 KRT76Q01546 638 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 CKAP4Q07065 602 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 TMTC1Q8IUR5 882 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 DYDC1Q8WWB3 177 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 BBS4Q96RK4 519 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 TBC1D22BQ9NU19 505 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 TMEM51Q9NW97 253 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 GOLGA8QA0A0J9YX86 632 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 GOLGA8OA6NCC3 632 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 GOLGA8NF8WBI6 632 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 PRPF4O43172 522 aaKnown RBP eCLIP3.63□□□□□ -1.83
LPP-220ENST00000617246 ACTN4O43707 911 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 ARL4AP40617 200 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 TPD52P55327 224 aaPredicted RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 CUL4AQ13619 759 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 EIF4A2Q14240 407 aaKnown RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 CHMP1BQ7LBR1 199 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 CCDC84Q86UT8 332 aaPredicted RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 MNS1Q8NEH6 495 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 FUBP3Q96I24 572 aaKnown RBP eCLIP3.63□□□□□ -1.83
LPP-220ENST00000617246 AGBL1Q96MI9 1066 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.63□□□□□ -1.83
LPP-220ENST00000617246 FAM49AQ9H0Q0 323 aaPredicted RBP3.63□□□□□ -1.83
LPP-220ENST00000617246 ZNF532Q9HCE3 1301 aa3.63□□□□□ -1.83
LPP-220ENST00000617246 CTSEP14091 401 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 RPP38P78345 283 aaKnown RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 CTDSPL2Q05D32 466 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 ANKRD20A8PQ5CZ79 823 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 SRLQ86TD4 932 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 CCHCR1Q8TD31 782 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 ASAP3Q8TDY4 903 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 UBR3Q6ZT12 1888 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 PIK3CAP42336 1068 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 MAP1SQ66K74 1059 aaPredicted RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 HERC6Q8IVU3 1022 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 STAT3P40763 770 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 TRIM11Q96F44 468 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 ASIC4Q96FT7 647 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 RAVER2Q9HCJ3 691 aaKnown RBP3.62□□□□□ -1.83
LPP-220ENST00000617246 BMP10O95393 424 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 PLCL1Q15111 1095 aa3.62□□□□□ -1.83
LPP-220ENST00000617246 CAPSLQ8WWF8 208 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms