RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 CTAGE1Q96RT6 745 aa17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 RUSC1Q9BVN2 902 aa17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 DHX33Q9H6R0 707 aaKnown RBP17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 PCDHA2Q9Y5H9 948 aa17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 MYH9P35579 1960 aaKnown RBP17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 MROH7Q68CQ1 1323 aa17.38■□□□□ 0.37
PCDHGC3-204ENST00000617222 IGKV6-21A0A0C4DH24 114 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 ZNF202O95125 648 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 CD4P01730 458 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 CYP11B2P19099 503 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 EMC2Q15006 297 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 C1orf186Q6ZWK4 172 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 MAEAQ7L5Y9 396 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 GPBP1Q86WP2 473 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 EXOC8Q8IYI6 725 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 LRRC71Q8N4P6 559 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 RETREG2Q8NC44 543 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 ENGASEQ8NFI3 743 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 SLC7A3Q8WY07 619 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 JPH2Q9BR39 696 aaPredicted RBP17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 FAM49AQ9H0Q0 323 aaPredicted RBP17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 CUEDC2Q9H467 287 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 ATP6V0A4Q9HBG4 840 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 POLD4Q9HCU8 107 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 XPNPEP1Q9NQW7 623 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 PDLIM7Q9NR12 457 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 USP25Q9UHP3 1055 aa17.37■□□□□ 0.37
PCDHGC3-204ENST00000617222 SMIM35A0A1B0GVV1 85 aa17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 ACTN4O43707 911 aaKnown RBP17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 SLFN14P0C7P3 912 aa17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 MCM4P33991 863 aa17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 CLCN3P51790 818 aa17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 FAM160A1Q05DH4 1040 aa17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 FAAP100Q0VG06 881 aa17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 PTK7Q13308 1070 aa17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 MKRN4PQ13434 485 aaPredicted RBP17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 SNW1Q13573 536 aaKnown RBP17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 SERINC5Q86VE9 423 aa17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 CEP57L1Q8IYX8 460 aa17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 KIAA0319LQ8IZA0 1049 aa17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 FMR1NBQ8N0W7 255 aaPredicted RBP17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 DNAJB3Q8WWF6 145 aa17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 STAMQ92783 540 aa17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 TMEM143Q96AN5 459 aa17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 MTRQ99707 1265 aa17.36■□□□□ 0.37
PCDHGC3-204ENST00000617222 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 NPHP3-ACAD11A0A0J9YXS1 232 aa17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 NR1I2O75469 434 aa17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 TMOD1P28289 359 aa17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 DNM2P50570 870 aa17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 RAD51AP2Q09MP3 1159 aa17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 DRP2Q13474 957 aa17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 ARSHQ5FYA8 562 aa17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 FAM102BQ5T8I3 360 aa17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 TAF2Q6P1X5 1199 aa17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 KRBA2Q6ZNG9 492 aa17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 LINC01465Q8N7H1 131 aa17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 CNNM3Q8NE01 707 aa17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 WNT8BQ93098 351 aa17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 HTATIP2Q9BUP3 242 aa17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 SUCLA2Q9P2R7 463 aaPredicted RBP17.35■□□□□ 0.37
PCDHGC3-204ENST00000617222 MYMKA6NI61 221 aa17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 KRT18P05783 430 aaKnown RBP17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 AFMP43652 599 aa17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 BRCA2P51587 3418 aa17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 WDR81Q562E7 1941 aa17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 IER5Q5VY09 327 aa17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 MCPH1Q8NEM0 835 aa17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 TCP11Q8WWU5 503 aa17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 DHX38Q92620 1227 aaKnown RBP17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 PAGE5Q96GU1 130 aa17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 MAP7D2Q96T17 732 aa17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 TNMDQ9H2S6 317 aa17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 MAGEF1Q9HAY2 307 aa17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 GPRC5CQ9NQ84 441 aa17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 TMEM39AQ9NV64 488 aa17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 KBTBD4Q9NVX7 518 aa17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 AKT3Q9Y243 479 aa17.34■□□□□ 0.37
PCDHGC3-204ENST00000617222 GAS2O43903 313 aaKnown RBP17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 HIP1RO75146 1068 aa17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 CAPN15O75808 1086 aa17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 CLTBP09497 229 aa17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 GUCY2CP25092 1073 aa17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 THPOP40225 353 aa17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 AMPD3Q01432 767 aa17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 CACNB1Q02641 598 aaPredicted RBP17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 GIT2Q14161 759 aa17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 TRIM71Q2Q1W2 868 aaKnown RBP17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 DYMQ7RTS9 669 aa17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 RSPH3Q86UC2 560 aa17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 GRAMD1CQ8IYS0 662 aa17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 NME8Q8N427 588 aa17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 PRPF31Q8WWY3 499 aaKnown RBP17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 LRRC27Q9C0I9 530 aa17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 POLR3FQ9H1D9 316 aaPredicted RBP17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 DACT1Q9NYF0 836 aa17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 KCND2Q9NZV8 630 aa17.33■□□□□ 0.36
PCDHGC3-204ENST00000617222 SFI1A8K8P3 1242 aa17.32■□□□□ 0.36
PCDHGC3-204ENST00000617222 VTNP04004 478 aa17.32■□□□□ 0.36
PCDHGC3-204ENST00000617222 ARL2P36404 184 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms