RNA–Protein interactions for RNA: ENST00000617164.4

BARD1-212, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 1 (best) BASIC

Gene BARD1, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-212ENST00000617164 TSPY1Q01534 308 aa13.21□□□□□ -0.29
BARD1-212ENST00000617164 ZKSCAN4Q969J2 545 aaPredicted RBP13.21□□□□□ -0.29
BARD1-212ENST00000617164 DGAT1O75907 488 aa13.21□□□□□ -0.3
BARD1-212ENST00000617164 ATF2P15336 505 aa13.21□□□□□ -0.3
BARD1-212ENST00000617164 AP3M2P53677 418 aa13.21□□□□□ -0.3
BARD1-212ENST00000617164 FCGRTP55899 365 aa13.21□□□□□ -0.3
BARD1-212ENST00000617164 TTC39CQ8N584 583 aa13.21□□□□□ -0.3
BARD1-212ENST00000617164 DDX23Q9BUQ8 820 aaKnown RBP13.21□□□□□ -0.3
BARD1-212ENST00000617164 GOLPH3LQ9H4A5 285 aa13.21□□□□□ -0.3
BARD1-212ENST00000617164 CPSF3Q9UKF6 684 aaKnown RBP13.21□□□□□ -0.3
BARD1-212ENST00000617164 PP2D1A8MPX8 630 aa13.21□□□□□ -0.3
BARD1-212ENST00000617164 VEGFAP15692 232 aaPredicted RBP13.21□□□□□ -0.3
BARD1-212ENST00000617164 GUF1Q8N442 669 aaKnown RBP13.21□□□□□ -0.3
BARD1-212ENST00000617164 ATP2A3Q93084 1043 aa13.21□□□□□ -0.3
BARD1-212ENST00000617164 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.21□□□□□ -0.3
BARD1-212ENST00000617164 ZBBXA8MT70 800 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 KRT15P19012 456 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 EIF4A3P38919 411 aaKnown RBP13.2□□□□□ -0.3
BARD1-212ENST00000617164 FYB2Q5VWT5 728 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 ERICH1Q86X53 443 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 SMAP1Q8IYB5 467 aaPredicted RBP13.2□□□□□ -0.3
BARD1-212ENST00000617164 CCSER1Q9C0I3 900 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 GBA2Q9HCG7 927 aaPredicted RBP13.2□□□□□ -0.3
BARD1-212ENST00000617164 DDX41Q9UJV9 622 aaKnown RBP13.2□□□□□ -0.3
BARD1-212ENST00000617164 CNTNAP5Q8WYK1 1306 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 PASKQ96RG2 1323 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 KIAA0391O15091 583 aaKnown RBP13.2□□□□□ -0.3
BARD1-212ENST00000617164 CIITAP33076 1130 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 FAM83AQ86UY5 434 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 SCINQ9Y6U3 715 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 FAM205AQ6ZU69 1335 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 MAGEB2O15479 319 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 SRGAP2BP0DMP2 458 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 HOXA10P31260 410 aaPredicted RBP13.2□□□□□ -0.3
BARD1-212ENST00000617164 HPDP32754 393 aaPredicted RBP13.2□□□□□ -0.3
BARD1-212ENST00000617164 PRCPP42785 496 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 CASP7P55210 303 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 DDR1Q08345 913 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 TXNRD3Q86VQ6 643 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 CTAGE3PQ8IX95 158 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 SCFD2Q8WU76 684 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 MXRA8Q9BRK3 442 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 NHEJ1Q9H9Q4 299 aaPredicted RBP13.2□□□□□ -0.3
BARD1-212ENST00000617164 DNAJC12Q9UKB3 198 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 ESYT2A0FGR8 921 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 PRPSAP2O60256 369 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 CSPG5O95196 566 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 KRT1P04264 644 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 C6orf222P0C671 652 aaPredicted RBP13.2□□□□□ -0.3
BARD1-212ENST00000617164 TBXAS1P24557 533 aaPredicted RBP13.2□□□□□ -0.3
BARD1-212ENST00000617164 VAMP7P51809 220 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 NFIAQ12857 509 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 MXD4Q14582 209 aaPredicted RBP13.2□□□□□ -0.3
BARD1-212ENST00000617164 HHATQ5VTY9 493 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 C3orf67Q6ZVT6 689 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 HAUS6Q7Z4H7 955 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 GPD1LQ8N335 351 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 PANX2Q96RD6 677 aa13.2□□□□□ -0.3
BARD1-212ENST00000617164 SUCLA2Q9P2R7 463 aaPredicted RBP13.2□□□□□ -0.3
BARD1-212ENST00000617164 IPO11Q9UI26 975 aaKnown RBP13.2□□□□□ -0.3
BARD1-212ENST00000617164 ICAM1P05362 532 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 CAPN2P17655 700 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 CCDC6Q16204 474 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 ARL13BQ3SXY8 428 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 ZMYND12Q9H0C1 365 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 GCLMP48507 274 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 BACE1P56817 501 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 FKBP1AP62942 108 aaKnown RBP13.19□□□□□ -0.3
BARD1-212ENST00000617164 CCDC110Q8TBZ0 833 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 AGBL1Q96MI9 1066 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 RIT2Q99578 217 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 GCLCP48506 637 aaPredicted RBP13.19□□□□□ -0.3
BARD1-212ENST00000617164 CCDC121Q6ZUS5 278 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 NCAPGQ9BPX3 1015 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 KCND2Q9NZV8 630 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 CEP72Q9P209 647 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 FBXO2Q9UK22 296 aaPredicted RBP13.19□□□□□ -0.3
BARD1-212ENST00000617164 SH3BP5O60239 455 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 RARBP10826 455 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 XPAP23025 273 aaPredicted RBP13.19□□□□□ -0.3
BARD1-212ENST00000617164 CASP1P29466 404 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 RFC5P40937 340 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 ELF2Q15723 593 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 ELMOD1Q8N336 334 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 RNF149Q8NC42 400 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 RGL1Q9NZL6 768 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 MAD2L2Q9UI95 211 aa13.19□□□□□ -0.3
BARD1-212ENST00000617164 VIMP08670 466 aaKnown RBP13.18□□□□□ -0.3
BARD1-212ENST00000617164 GPC2Q8N158 579 aa13.18□□□□□ -0.3
BARD1-212ENST00000617164 SMC1BQ8NDV3 1235 aa13.18□□□□□ -0.3
BARD1-212ENST00000617164 BPIFA3Q9BQP9 254 aa13.18□□□□□ -0.3
BARD1-212ENST00000617164 MAP3K20Q9NYL2 800 aaKnown RBP13.18□□□□□ -0.3
BARD1-212ENST00000617164 A6NNZ2 444 aa13.18□□□□□ -0.3
BARD1-212ENST00000617164 LGALS16A8MUM7 142 aa13.18□□□□□ -0.3
BARD1-212ENST00000617164 PRKCBP05771 671 aa13.18□□□□□ -0.3
BARD1-212ENST00000617164 VPS41P49754 854 aa13.18□□□□□ -0.3
BARD1-212ENST00000617164 TUBB8Q3ZCM7 444 aa13.18□□□□□ -0.3
BARD1-212ENST00000617164 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
BARD1-212ENST00000617164 ADAT2Q7Z6V5 191 aaKnown RBP13.18□□□□□ -0.3
BARD1-212ENST00000617164 LCMT1Q9UIC8 334 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms