RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 THOC5Q13769 683 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 KCTD1Q719H9 257 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 TRIM59Q8IWR1 403 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 GFM2Q969S9 779 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 KLC2Q9H0B6 622 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 ADAM22Q9P0K1 906 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 SENP1Q9P0U3 644 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 CYP2D7A0A087X1C5 515 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 TCP11X1B4DZS4 312 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 CCDC22O60826 627 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 GGPS1O95749 300 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 NR3C1P04150 777 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 SLC16A2P36021 539 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 TBC1D9BQ66K14 1250 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 AGGF1Q8N302 714 aaeCLIP11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 TC2NQ8N9U0 490 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 SUPT20HQ8NEM7 779 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 FAF2Q96CS3 445 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 BTBD6Q96KE9 485 aa11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 USP15Q9Y4E8 981 aaPredicted RBP11.4□□□□□ -0.58
CLTCL1-209ENST00000617103 ZNF185O15231 689 aa11.4□□□□□ -0.59
CLTCL1-209ENST00000617103 TMEM259Q4ZIN3 620 aa11.4□□□□□ -0.59
CLTCL1-209ENST00000617103 PDXDC1Q6P996 788 aa11.4□□□□□ -0.59
CLTCL1-209ENST00000617103 CYB5R4Q7L1T6 521 aa11.4□□□□□ -0.59
CLTCL1-209ENST00000617103 SEC16BQ96JE7 1060 aa11.4□□□□□ -0.59
CLTCL1-209ENST00000617103 KANSL2Q9H9L4 492 aa11.4□□□□□ -0.59
CLTCL1-209ENST00000617103 SLC38A10Q9HBR0 1119 aa11.4□□□□□ -0.59
CLTCL1-209ENST00000617103 ADAMTS12P58397 1594 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 RASGRF1Q13972 1273 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 TBC1D10BQ4KMP7 808 aaPredicted RBP11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 LARGE2Q8N3Y3 721 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 RFFLQ8WZ73 363 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 SEPT9Q9UHD8 586 aaPredicted RBP11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 ANGPTL3Q9Y5C1 460 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 UBN2Q6ZU65 1347 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 FAM107AO95990 144 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 CUL3Q13618 768 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 UBE2SQ16763 222 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 ACAD11Q709F0 780 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 TEX9Q8N6V9 391 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 GIPC2Q8TF65 315 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 ZC3H15Q8WU90 426 aaKnown RBP11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 CEP170P1Q96L14 293 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 POLR3CQ9BUI4 534 aaPredicted RBP11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 SERPINB13Q9UIV8 391 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 CDK12Q9NYV4 1490 aaPredicted RBP11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 ADGBQ8N7X0 1667 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 M0QZ92 97 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 MAN1A2O60476 641 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 CDC27P30260 824 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 PLA2G4AP47712 749 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 SCNN1DP51172 638 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 UBXN2AP68543 259 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 TFDP2Q14188 446 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 KCNB1Q14721 858 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 STAT4Q14765 748 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 RABGAP1LQ5R372 815 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 AGBL2Q5U5Z8 902 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 OR6B2Q6IFH4 312 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 ERICH1Q86X53 443 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 SLC26A7Q8TE54 656 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 SNF8Q96H20 258 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 CEP19Q96LK0 163 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 XPO6Q96QU8 1125 aaKnown RBP11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 BRIP1Q9BX63 1249 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 TRPV6Q9H1D0 765 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 WNT8AQ9H1J5 351 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 ADD3Q9UEY8 706 aaKnown RBP11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 TUBE1Q9UJT0 475 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 TRIM33Q9UPN9 1127 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 YEATS2Q9ULM3 1422 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 PFASO15067 1338 aa11.39□□□□□ -0.59
CLTCL1-209ENST00000617103 PNMA6FA0A0J9YX94 578 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 SPDYE16A6NNV3 312 aaPredicted RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 PHF20L1A8MW92 1017 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 KPNA7A9QM74 516 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 KIF28PB7ZC32 967 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 TLR3O15455 904 aaKnown RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 OATP04181 439 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 ALDH1B1P30837 517 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 NOP14P78316 857 aaKnown RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 TFDP1Q14186 410 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 KIF22Q14807 665 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 NR1I3Q14994 352 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 TAF1BQ53T94 588 aaPredicted RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 RAD9BQ6WBX8 426 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 TRIM67Q6ZTA4 783 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 BZW1Q7L1Q6 419 aaKnown RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 ING2Q9H160 280 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 LY9Q9HBG7 655 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 TRAF3IP3Q9Y228 551 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 RNF103-CHMP3A0A140T963 221 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 H7C1W4 665 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 USP17L8P0C7I0 530 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 PGM1P36871 562 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 MCAMP43121 646 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 FXR1P51114 621 aaKnown RBP eCLIP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 TFAMQ00059 246 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms