RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 FKBP15Q5T1M5 1219 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 CNGA4Q8IV77 575 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 FBXO16Q8IX29 292 aaPredicted RBP8.58□□□□□ -1.04
NEK3-207ENST00000617054 CCDC112Q8NEF3 446 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 GPRASP2Q96D09 838 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 ZBTB10Q96DT7 871 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 PDGFCQ9NRA1 345 aa8.58□□□□□ -1.04
NEK3-207ENST00000617054 SEPT9Q9UHD8 586 aaPredicted RBP8.58□□□□□ -1.04
NEK3-207ENST00000617054 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.58□□□□□ -1.04
NEK3-207ENST00000617054 LCTP09848 1927 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 MYH11P35749 1972 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 CCDC169A6NNP5 214 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 PDHXO00330 501 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 CETN3O15182 167 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 NR3C1P04150 777 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 TPM1P09493 284 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 KRT76Q01546 638 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 ARID5AQ03989 594 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 SNAPC2Q13487 334 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 MAN2A1Q16706 1144 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 MTERF2Q49AM1 385 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 CHADLQ6NUI6 762 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 TRIM50Q86XT4 487 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 SYCP3Q8IZU3 236 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 PANX2Q96RD6 677 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 TRIM10Q9UDY6 481 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 DNAI1Q9UI46 699 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 ITIH6Q6UXX5 1313 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 CCL15-CCL14A0A0B4J2E2 113 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 BTBD19C9JJ37 291 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 EIF3JO75822 258 aaKnown RBP8.57□□□□□ -1.04
NEK3-207ENST00000617054 ATP4AP20648 1035 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 KCNH2Q12809 1159 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 CCL15Q16663 113 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 GNPTABQ3T906 1256 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 BSNDQ8WZ55 320 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 ELMO3Q96BJ8 720 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 MS4A4AQ96JQ5 239 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 ZNF668Q96K58 619 aaPredicted RBP8.57□□□□□ -1.04
NEK3-207ENST00000617054 OLFML3Q9NRN5 406 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 SIK3Q9Y2K2 1263 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 MCM3APO60318 1980 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 MYPNQ86TC9 1320 aa8.57□□□□□ -1.04
NEK3-207ENST00000617054 LRRN2O75325 713 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 SLC9A1P19634 815 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 UBA1P22314 1058 aaKnown RBP8.56□□□□□ -1.04
NEK3-207ENST00000617054 ERVK-9P63128 1117 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 PRKCEQ02156 737 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 CYP27A1Q02318 531 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 HSDL1Q3SXM5 330 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 CST9Q5W186 159 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 ABHD15Q6UXT9 468 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 RRAGAQ7L523 313 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 FASTKD5Q7L8L6 764 aaKnown RBP8.56□□□□□ -1.04
NEK3-207ENST00000617054 C4orf19Q8IY42 314 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 OR8K1Q8NGG5 319 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 BRI3BPQ8WY22 251 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 FAM84AQ96KN4 292 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 FGD4Q96M96 766 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 PTPN18Q99952 460 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 TTYH3Q9C0H2 523 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.56□□□□□ -1.04
NEK3-207ENST00000617054 CAPN11Q9UMQ6 739 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 V9GYY5 206 aaPredicted RBP8.56□□□□□ -1.04
NEK3-207ENST00000617054 A0A1W2PQC6 194 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 GOLGA8IPA6NC78 632 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 GOLGA8JA6NMD2 632 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 FGFR1OPO95684 399 aaKnown RBP8.56□□□□□ -1.04
NEK3-207ENST00000617054 OSBPP22059 807 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 JAK3P52333 1124 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 ZNF131P52739 623 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 KCTD2Q14681 263 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 GJB7Q6PEY0 223 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 TEX2Q8IWB9 1127 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 TRIM59Q8IWR1 403 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 FAM133AQ8N9E0 248 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 PPP1R13LQ8WUF5 828 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 TMEM143Q96AN5 459 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 WDR24Q96S15 920 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 MMP19Q99542 508 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 GBA2Q9HCG7 927 aaPredicted RBP8.56□□□□□ -1.04
NEK3-207ENST00000617054 PNMA2Q9UL42 364 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 TRAF3IP3Q9Y228 551 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 ADGRG1Q9Y653 693 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 GRXCR2A6NFK2 248 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 POM121CA8CG34 1229 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 PDXKO00764 312 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 SOCS7O14512 581 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 SLC26A4O43511 780 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 GGPS1O95749 300 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 PSAPP07602 524 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 TRIM49P0CI25 452 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 TRIM49CP0CI26 452 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 PNMA6AP0CW24 399 aaPredicted RBP8.56□□□□□ -1.04
NEK3-207ENST00000617054 GUCY2CP25092 1073 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 SFNP31947 248 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 RBM10P98175 930 aaKnown RBP8.56□□□□□ -1.04
NEK3-207ENST00000617054 GRM1Q13255 1194 aa8.56□□□□□ -1.04
NEK3-207ENST00000617054 ZNF746Q6NUN9 644 aaPredicted RBP8.56□□□□□ -1.04
NEK3-207ENST00000617054 TRIM65Q6PJ69 517 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms