RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 TNNC1P63316 161 aa16.1■□□□□ 0.17
TNFRSF11A-206ENST00000617039 KCNB1Q14721 858 aa16.1■□□□□ 0.17
TNFRSF11A-206ENST00000617039 DCAF15Q66K64 600 aa16.1■□□□□ 0.17
TNFRSF11A-206ENST00000617039 RINT1Q6NUQ1 792 aa16.1■□□□□ 0.17
TNFRSF11A-206ENST00000617039 AMFRQ9UKV5 643 aa16.1■□□□□ 0.17
TNFRSF11A-206ENST00000617039 MAGED2Q9UNF1 606 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF11A-206ENST00000617039 BCL9LQ86UU0 1499 aa16.1■□□□□ 0.17
TNFRSF11A-206ENST00000617039 MAP3K9P80192 1104 aa16.1■□□□□ 0.17
TNFRSF11A-206ENST00000617039 IFI16Q16666 785 aaKnown RBP16.1■□□□□ 0.17
TNFRSF11A-206ENST00000617039 SH2D3CQ8N5H7 860 aa16.1■□□□□ 0.17
TNFRSF11A-206ENST00000617039 MLXIPLQ9NP71 852 aa16.1■□□□□ 0.17
TNFRSF11A-206ENST00000617039 CYP26A1O43174 497 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 KIAA0754O94854 1291 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 FGGP02679 453 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 ZNF653Q96CK0 615 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 IVNS1ABPQ9Y6Y0 642 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 UCHL3P15374 230 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 CAP2P40123 477 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 IFNAR2P48551 515 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 USP11P51784 963 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 HERVK_113P62684 666 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 IFRD2Q12894 506 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 AP3B2Q13367 1082 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 PDIA5Q14554 519 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 SEPT7Q16181 437 aaKnown RBP16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 KRT71Q3SY84 523 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 MCF2L2Q86YR7 1114 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 F5H423 210 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 CCDC172P0C7W6 258 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 YWHABP31946 246 aaKnown RBP16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 SH3RF1Q7Z6J0 888 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 OR2W6PQ8NHA6 318 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 FAM76AQ8TAV0 307 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 SLC7A3Q8WY07 619 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 MKRN1Q9UHC7 482 aaKnown RBP16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 AMACRQ9UHK6 382 aa16.09■□□□□ 0.17
TNFRSF11A-206ENST00000617039 QARSP47897 775 aaKnown RBP16.08■□□□□ 0.17
TNFRSF11A-206ENST00000617039 PPP2R5DQ14738 602 aa16.08■□□□□ 0.17
TNFRSF11A-206ENST00000617039 GNPTABQ3T906 1256 aa16.08■□□□□ 0.17
TNFRSF11A-206ENST00000617039 OSBPL9Q96SU4 736 aa16.08■□□□□ 0.17
TNFRSF11A-206ENST00000617039 DMGDHQ9UI17 866 aaKnown RBP16.08■□□□□ 0.17
TNFRSF11A-206ENST00000617039 KIAA1755Q5JYT7 1200 aa16.08■□□□□ 0.16
TNFRSF11A-206ENST00000617039 BSPRYQ5W0U4 402 aa16.08■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TRIM50Q86XT4 487 aa16.08■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CELF4Q9BZC1 486 aaKnown RBP16.08■□□□□ 0.16
TNFRSF11A-206ENST00000617039 PODXL2Q9NZ53 605 aa16.08■□□□□ 0.16
TNFRSF11A-206ENST00000617039 K7ERI5 159 aa16.08■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TUBB4AP04350 444 aa16.08■□□□□ 0.16
TNFRSF11A-206ENST00000617039 NR3C2P08235 984 aa16.08■□□□□ 0.16
TNFRSF11A-206ENST00000617039 GIT2Q14161 759 aa16.08■□□□□ 0.16
TNFRSF11A-206ENST00000617039 FAM47CQ5HY64 1035 aa16.08■□□□□ 0.16
TNFRSF11A-206ENST00000617039 SCYL2Q6P3W7 929 aa16.08■□□□□ 0.16
TNFRSF11A-206ENST00000617039 OTUD6AQ7L8S5 288 aa16.08■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ZBTB10Q96DT7 871 aa16.08■□□□□ 0.16
TNFRSF11A-206ENST00000617039 TBK1Q9UHD2 729 aa16.08■□□□□ 0.16
TNFRSF11A-206ENST00000617039 HERC5Q9UII4 1024 aaKnown RBP16.08■□□□□ 0.16
TNFRSF11A-206ENST00000617039 RNF40O75150 1001 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 GNA14O95837 355 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 SERPING1P05155 500 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CNGA1P29973 690 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 AFAP1L1Q8TED9 768 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 KAT5Q92993 513 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 FAM20AQ96MK3 541 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 JRKLQ9Y4A0 524 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 PCDHB4Q9Y5E5 795 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 KDM3BQ7LBC6 1761 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 PDS5AQ29RF7 1337 aaKnown RBP16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 PIK3CAP42336 1068 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CNTN2Q02246 1040 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CBWD2Q8IUF1 395 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 LMBR1Q8WVP7 490 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 DHX38Q92620 1227 aaKnown RBP16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 MAGOHBQ96A72 148 aaKnown RBP16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ACSF2Q96CM8 615 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 MAGEF1Q9HAY2 307 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 OSGEPQ9NPF4 335 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 RBM12Q9NTZ6 932 aaKnown RBP16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 SNX24Q9Y343 169 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ATP9AO75110 1047 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 CTNNA1P35221 906 aaKnown RBP16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 C7orf31Q8N865 590 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 THOC1Q96FV9 657 aaKnown RBP16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 AKT3Q9Y243 479 aa16.07■□□□□ 0.16
TNFRSF11A-206ENST00000617039 EVI5O60447 810 aa16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 RPA1P27694 616 aa16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ANKRD42Q8N9B4 389 aa16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 MTMR8Q96EF0 704 aa16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 FTLP02792 175 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 KCNJ1P48048 391 aa16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 PDXDC1Q6P996 788 aa16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 METTL14Q9HCE5 456 aaKnown RBP16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 MCM3P25205 808 aa16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 HMGB2P26583 209 aaKnown RBP16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 GGCXP38435 758 aa16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 FXR2P51116 673 aaKnown RBP eCLIP16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ZSCAN26Q16670 478 aa16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 RHPN2Q8IUC4 686 aa16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 IFT20Q8IY31 132 aa16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 SPATA4Q8NEY3 305 aa16.06■□□□□ 0.16
TNFRSF11A-206ENST00000617039 ADAM21Q9UKJ8 722 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms