RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 CEP72Q9P209 647 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 E9PMD0 336 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 P4HBP07237 508 aaKnown RBP19■□□□□ 0.63
ATXN2-227ENST00000616825 FDX1P10109 184 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 SFNP31947 248 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 TRIM28Q13263 835 aaKnown RBP19■□□□□ 0.63
ATXN2-227ENST00000616825 SARM1Q6SZW1 724 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 TTC25Q96NG3 672 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 ZWILCHQ9H900 591 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 IQANK1A0A1B0GTG1 560 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 GNGT2O14610 69 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 HUS1O60921 280 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 KCNH2Q12809 1159 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 TUBB6Q9BUF5 446 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 GINM1Q9NU53 330 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 PPP1R9AQ9ULJ8 1098 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 STMN1P16949 149 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 CASP8Q14790 479 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 ZNF568Q3ZCX4 644 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 HSP90AA5PQ58FG0 334 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 CYB5R4Q7L1T6 521 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 KLC2Q9H0B6 622 aa19■□□□□ 0.63
ATXN2-227ENST00000616825 SPECC1L-ADORA2AF8WAN1 911 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 CSPG5O95196 566 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 NR1D1P20393 614 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 IL1RL1Q01638 556 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 SNCBQ16143 134 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 TMCO4Q5TGY1 634 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 TOGARAM2Q6ZUX3 1019 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 SLC7A5Q01650 507 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 PDE1CQ14123 709 aaPredicted RBP18.99■□□□□ 0.63
ATXN2-227ENST00000616825 NKX1-1Q15270 411 aaPredicted RBP18.99■□□□□ 0.63
ATXN2-227ENST00000616825 QRICH1Q2TAL8 776 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 RWDD4Q6NW29 188 aaKnown RBP18.99■□□□□ 0.63
ATXN2-227ENST00000616825 KLC3Q6P597 504 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 NDUFAF2Q8N183 169 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 ISCA1Q9BUE6 129 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 DIS3Q9Y2L1 958 aaKnown RBP18.99■□□□□ 0.63
ATXN2-227ENST00000616825 AXIN2Q9Y2T1 843 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 MROH7-TTC4A0A0A0MT08 1334 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 NEDD4P46934 1319 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 NVLO15381 856 aaKnown RBP18.99■□□□□ 0.63
ATXN2-227ENST00000616825 ECE2O60344 883 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 ACSL3O95573 720 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 CHEK2O96017 543 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 CYP19A1P11511 503 aaPredicted RBP18.99■□□□□ 0.63
ATXN2-227ENST00000616825 GPC5P78333 572 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 ADCY2Q08462 1091 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 ZNF699Q32M78 642 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 MB21D2Q8IYB1 491 aaPredicted RBP18.99■□□□□ 0.63
ATXN2-227ENST00000616825 FIS1Q9Y3D6 152 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 ABCB11O95342 1321 aa18.99■□□□□ 0.63
ATXN2-227ENST00000616825 DENND3A2RUS2 1198 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 NEDD1Q8NHV4 660 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 SYNGAP1Q96PV0 1343 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 CASP1P29466 404 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 TXNRD1Q16881 649 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 THEM5Q8N1Q8 247 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 ARHGEF1Q92888 912 aaKnown RBP18.98■□□□□ 0.63
ATXN2-227ENST00000616825 POTEB3A0JP26 581 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 POTECB2RU33 542 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 SLC16A4O15374 487 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 MX2P20592 715 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 KNOP1Q1ED39 458 aaKnown RBP18.98■□□□□ 0.63
ATXN2-227ENST00000616825 POTEBQ6S5H4 581 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 TMEM270Q6UE05 265 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 BANK1Q8NDB2 785 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 FAM213AQ9BRX8 229 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 DNAJC17Q9NVM6 304 aaKnown RBP18.98■□□□□ 0.63
ATXN2-227ENST00000616825 STRIP2Q9ULQ0 834 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 COL15A1P39059 1388 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 LUC7L3O95232 432 aaKnown RBP18.98■□□□□ 0.63
ATXN2-227ENST00000616825 SOX5P35711 763 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 PRCPP42785 496 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 GRM4Q14833 912 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 GLE1Q53GS7 698 aaKnown RBP18.98■□□□□ 0.63
ATXN2-227ENST00000616825 LY9Q9HBG7 655 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 NFU1Q9UMS0 254 aa18.98■□□□□ 0.63
ATXN2-227ENST00000616825 ADGRL3Q9HAR2 1447 aa18.97■□□□□ 0.63
ATXN2-227ENST00000616825 WDR91A4D1P6 747 aa18.97■□□□□ 0.63
ATXN2-227ENST00000616825 RECQLP46063 649 aaPredicted RBP18.97■□□□□ 0.63
ATXN2-227ENST00000616825 TRIM67Q6ZTA4 783 aa18.97■□□□□ 0.63
ATXN2-227ENST00000616825 GUF1Q8N442 669 aaKnown RBP18.97■□□□□ 0.63
ATXN2-227ENST00000616825 HSPH1Q92598 858 aa18.97■□□□□ 0.63
ATXN2-227ENST00000616825 RAD54LQ92698 747 aa18.97■□□□□ 0.63
ATXN2-227ENST00000616825 SNX24Q9Y343 169 aa18.97■□□□□ 0.63
ATXN2-227ENST00000616825 NMT2O60551 498 aa18.97■□□□□ 0.63
ATXN2-227ENST00000616825 CALB1P05937 261 aa18.97■□□□□ 0.63
ATXN2-227ENST00000616825 ARL4CP56559 192 aa18.97■□□□□ 0.63
ATXN2-227ENST00000616825 TAF1BQ53T94 588 aaPredicted RBP18.97■□□□□ 0.63
ATXN2-227ENST00000616825 SLC10A5Q5PT55 438 aa18.97■□□□□ 0.63
ATXN2-227ENST00000616825 RSBN1LQ6PCB5 846 aaPredicted RBP18.97■□□□□ 0.63
ATXN2-227ENST00000616825 EXOC4Q96A65 974 aa18.97■□□□□ 0.63
ATXN2-227ENST00000616825 BARHL2Q9NY43 387 aa18.97■□□□□ 0.63
ATXN2-227ENST00000616825 KLHL8Q9P2G9 620 aaPredicted RBP18.97■□□□□ 0.63
ATXN2-227ENST00000616825 G3BP2Q9UN86 482 aaKnown RBP18.97■□□□□ 0.63
ATXN2-227ENST00000616825 INPP5FQ9Y2H2 1132 aa18.97■□□□□ 0.63
ATXN2-227ENST00000616825 SYNMO15061 1565 aa18.97■□□□□ 0.63
ATXN2-227ENST00000616825 TRIM49BA6NDI0 452 aa18.97■□□□□ 0.63
ATXN2-227ENST00000616825 GSG1L2A8MUP6 293 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms