RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 C9orf118A6NHY6 69 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 TSPAN6O43657 245 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 FBXO21O94952 628 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 AMY2AP04746 511 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 AMY2BP19961 511 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 IRF9Q00978 393 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 PIN1Q13526 163 aaPredicted RBP5.75□□□□□ -1.49
NEAT1-205ENST00000616315 R3HDM1Q15032 1099 aaKnown RBP5.75□□□□□ -1.49
NEAT1-205ENST00000616315 SURF1Q15526 300 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 ZNF174Q15697 407 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 DDB1Q16531 1140 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 CR1LQ2VPA4 569 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 FIGNQ5HY92 759 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 OSTM1Q86WC4 334 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 PTRH1Q86Y79 214 aaKnown RBP5.75□□□□□ -1.49
NEAT1-205ENST00000616315 PASD1Q8IV76 773 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 CLRN3Q8NCR9 226 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 IGDCC4Q8TDY8 1250 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 AASDHPPTQ9NRN7 309 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 SRPK3Q9UPE1 567 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 HS3ST3A1Q9Y663 406 aa5.75□□□□□ -1.49
NEAT1-205ENST00000616315 KRIT1O00522 736 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 AKAP10O43572 662 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 HIP1RO75146 1068 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 SCGB1D2O95969 90 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 COL6A2P12110 1019 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 RAB27AP51159 221 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 ERVK-21P61565 698 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 ABCB5Q2M3G0 1257 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 EP400NLQ6ZTU2 488 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 NOSTRINQ8IVI9 506 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 KIAA1958Q8N8K9 716 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 PIP4K2CQ8TBX8 421 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 TSR2Q969E8 191 aaKnown RBP5.74□□□□□ -1.49
NEAT1-205ENST00000616315 HOOK2Q96ED9 719 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 AHCYL2Q96HN2 611 aaKnown RBP5.74□□□□□ -1.49
NEAT1-205ENST00000616315 C8orf48Q96LL4 319 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 CDK5RAP1Q96SZ6 601 aaKnown RBP5.74□□□□□ -1.49
NEAT1-205ENST00000616315 AP5M1Q9H0R1 490 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 PCIF1Q9H4Z3 704 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 ZIM2Q9NZV7 527 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 SPO11Q9Y5K1 396 aa5.74□□□□□ -1.49
NEAT1-205ENST00000616315 TCRBV5S4A2TA0A5A2 114 aa5.73□□□□□ -1.49
NEAT1-205ENST00000616315 MAN2B1O00754 1011 aa5.73□□□□□ -1.49
NEAT1-205ENST00000616315 KCNK3O14649 394 aa5.73□□□□□ -1.49
NEAT1-205ENST00000616315 NKRFO15226 690 aaKnown RBP eCLIP5.73□□□□□ -1.495e-30■□□□□ 9
NEAT1-205ENST00000616315 TGM5O43548 720 aa5.73□□□□□ -1.49
NEAT1-205ENST00000616315 ZBTB48P10074 688 aaPredicted RBP5.73□□□□□ -1.49
NEAT1-205ENST00000616315 EPHB4P54760 987 aa5.73□□□□□ -1.49
NEAT1-205ENST00000616315 CHRNA2Q15822 529 aa5.73□□□□□ -1.49
NEAT1-205ENST00000616315 PRAMEF18Q5VWM3 479 aa5.73□□□□□ -1.49
NEAT1-205ENST00000616315 USP51Q70EK9 711 aa5.73□□□□□ -1.49
NEAT1-205ENST00000616315 ZC3H18Q86VM9 953 aaKnown RBP5.73□□□□□ -1.49
NEAT1-205ENST00000616315 CIR1Q86X95 450 aaPredicted RBP5.73□□□□□ -1.49
NEAT1-205ENST00000616315 WDR75Q8IWA0 830 aaKnown RBP5.73□□□□□ -1.49
NEAT1-205ENST00000616315 FAM126BQ8IXS8 530 aa5.73□□□□□ -1.49
NEAT1-205ENST00000616315 CBARPQ8N350 705 aaPredicted RBP5.73□□□□□ -1.49
NEAT1-205ENST00000616315 UHMK1Q8TAS1 419 aaKnown RBP5.73□□□□□ -1.49
NEAT1-205ENST00000616315 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.73□□□□□ -1.49
NEAT1-205ENST00000616315 YTHDC1Q96MU7 727 aaKnown RBP5.73□□□□□ -1.49
NEAT1-205ENST00000616315 CDH19Q9H159 772 aa5.73□□□□□ -1.49
NEAT1-205ENST00000616315 DEF6Q9H4E7 631 aa5.73□□□□□ -1.49
NEAT1-205ENST00000616315 SLC6A20Q9NP91 592 aa5.73□□□□□ -1.49
NEAT1-205ENST00000616315 GEMIN8Q9NWZ8 242 aaKnown RBP5.73□□□□□ -1.49
NEAT1-205ENST00000616315 DSEQ9UL01 958 aa5.73□□□□□ -1.49
NEAT1-205ENST00000616315 TNKSO95271 1327 aa5.73□□□□□ -1.49
NEAT1-205ENST00000616315 WASHC2AQ641Q2 1341 aa5.73□□□□□ -1.49
NEAT1-205ENST00000616315 MAFKO60675 156 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 IL13P35225 146 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 IARSP41252 1262 aaKnown RBP5.72□□□□□ -1.49
NEAT1-205ENST00000616315 KIF11P52732 1056 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 MLLT6P55198 1093 aaPredicted RBP5.72□□□□□ -1.49
NEAT1-205ENST00000616315 TBX4P57082 545 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 PPP2CBP62714 309 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 PPP2CAP67775 309 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 PHC1P78364 1004 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 KLF1Q13351 362 aaPredicted RBP5.72□□□□□ -1.49
NEAT1-205ENST00000616315 LRRC41Q15345 812 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 TERF2Q15554 542 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 PTPN21Q16825 1174 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 SPDYAQ5MJ70 313 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 GPR158Q5T848 1215 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 BROXQ5VW32 411 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 FSTL4Q6MZW2 842 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 CYP4F22Q6NT55 531 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 MILR1Q7Z6M3 343 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 PLEKHH3Q7Z736 793 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 NLGN4XQ8N0W4 816 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 SH3RF2Q8TEC5 729 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 SEC14L1Q92503 715 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 ZSWIM3Q96MP5 696 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 CAMKK2Q96RR4 588 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 PCGF6Q9BYE7 350 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 VTA1Q9NP79 307 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 TOMM22Q9NS69 142 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 NUB1Q9Y5A7 615 aa5.72□□□□□ -1.49
NEAT1-205ENST00000616315 PATE3B3GLJ2 98 aa5.71□□□□□ -1.5
NEAT1-205ENST00000616315 SCDO00767 359 aa5.71□□□□□ -1.5
NEAT1-205ENST00000616315 PRC1O43663 620 aa5.71□□□□□ -1.5
NEAT1-205ENST00000616315 CLASP2O75122 1294 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms