RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 VCX3BQ9H321 246 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 VCX3AQ9NNX9 186 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 PASKQ96RG2 1323 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 NPHP3-ACAD11A0A0J9YXS1 232 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 RASA4BC9J798 803 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 RASA4O43374 803 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 SMNDC1O75940 238 aaKnown RBP eCLIP16.86■□□□□ 0.29
SYNRG-223ENST00000616179 SETSIPP0DME0 302 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 RPS6KA3P51812 740 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 GALCP54803 685 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.86■□□□□ 0.29
SYNRG-223ENST00000616179 CCDC62Q6P9F0 684 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 CCDC137Q6PK04 289 aaKnown RBP16.86■□□□□ 0.29
SYNRG-223ENST00000616179 GUF1Q8N442 669 aaKnown RBP16.86■□□□□ 0.29
SYNRG-223ENST00000616179 CNBD1Q8NA66 436 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 XRN1Q8IZH2 1706 aaKnown RBP16.86■□□□□ 0.29
SYNRG-223ENST00000616179 CFAP69A5D8W1 941 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 TMED1Q13445 227 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 LRRC36Q1X8D7 754 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 PCDHA6Q9UN73 950 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 PCDHA8Q9Y5H6 950 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 TACC3Q9Y6A5 838 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 MEIS1O00470 390 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 ADAMTS3O15072 1205 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 MAP3K7O43318 606 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 RTN2O75298 545 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 STRN3Q13033 797 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 CCDC152Q4G0S7 254 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 TEX9Q8N6V9 391 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 TTC1Q99614 292 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 MAGEF1Q9HAY2 307 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 ALG13Q9NP73 1137 aaKnown RBP16.86■□□□□ 0.29
SYNRG-223ENST00000616179 FRMPD2Q68DX3 1309 aaPredicted RBP16.85■□□□□ 0.29
SYNRG-223ENST00000616179 GNA14O95837 355 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 AFPP02771 609 aaKnown RBP16.85■□□□□ 0.29
SYNRG-223ENST00000616179 USP17L8P0C7I0 530 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 ATF3P18847 181 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 CA4P22748 312 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 KYNUQ16719 465 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 ZNF746Q6NUN9 644 aaPredicted RBP16.85■□□□□ 0.29
SYNRG-223ENST00000616179 USP17L2Q6R6M4 530 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 TPCN2Q8NHX9 752 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 COA7Q96BR5 231 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 CNTNAP5Q8WYK1 1306 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 ENTPD5O75356 428 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 CYP2J2P51589 502 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 FBXO41Q8TF61 875 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 DDX50Q9BQ39 737 aaKnown RBP16.85■□□□□ 0.29
SYNRG-223ENST00000616179 PCDHA12Q9UN75 941 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 BZW2Q9Y6E2 419 aaKnown RBP16.85■□□□□ 0.29
SYNRG-223ENST00000616179 PXDNQ92626 1479 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 E9PMD0 336 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 BLMHQ13867 455 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 TLDC1Q6P9B6 456 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 ARHGAP22Q7Z5H3 698 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 ADAM22Q9P0K1 906 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 NAGPAQ9UK23 515 aa16.85■□□□□ 0.29
SYNRG-223ENST00000616179 PJA2O43164 708 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 COASYQ13057 564 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 PPP2R5EQ16537 467 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 PHLDB3Q6NSJ2 640 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 AADACL2Q6P093 401 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 ZNF571Q7Z3V5 609 aaPredicted RBP16.84■□□□□ 0.29
SYNRG-223ENST00000616179 SLC35G2Q8TBE7 412 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 C1orf54Q8WWF1 131 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 RGL1Q9NZL6 768 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 KDM6AO15550 1401 aaPredicted RBP16.84■□□□□ 0.29
SYNRG-223ENST00000616179 RPL13P26373 211 aaKnown RBP16.84■□□□□ 0.29
SYNRG-223ENST00000616179 EPHB2P29323 1055 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 PABPC4Q13310 644 aaKnown RBP eCLIP16.84■□□□□ 0.29
SYNRG-223ENST00000616179 NSMFQ6X4W1 530 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 EPM2AIP1Q7L775 607 aaPredicted RBP16.84■□□□□ 0.29
SYNRG-223ENST00000616179 BAP1Q92560 729 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 PLVAPQ9BX97 442 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 MTFR1LQ9H019 292 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 EBF2Q9HAK2 575 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 MROH5Q6ZUA9 1318 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 GYG2O15488 501 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 AHCYL1O43865 530 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 CDR2Q01850 454 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 C7orf25Q9BPX7 421 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 PIDD1Q9HB75 910 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 CTNNAL1Q9UBT7 734 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 ZFP69BQ9UJL9 534 aa16.84■□□□□ 0.29
SYNRG-223ENST00000616179 MST1RQ04912 1400 aa16.83■□□□□ 0.29
SYNRG-223ENST00000616179 ECEL1O95672 775 aa16.83■□□□□ 0.29
SYNRG-223ENST00000616179 CETN2P41208 172 aa16.83■□□□□ 0.29
SYNRG-223ENST00000616179 CYP4A11Q02928 519 aa16.83■□□□□ 0.29
SYNRG-223ENST00000616179 ICA1Q05084 483 aa16.83■□□□□ 0.29
SYNRG-223ENST00000616179 HIPK4Q8NE63 616 aa16.83■□□□□ 0.29
SYNRG-223ENST00000616179 MIPOL1Q8TD10 442 aa16.83■□□□□ 0.29
SYNRG-223ENST00000616179 SFI1A8K8P3 1242 aa16.83■□□□□ 0.28
SYNRG-223ENST00000616179 CIB2O75838 187 aa16.83■□□□□ 0.28
SYNRG-223ENST00000616179 CBX6O95503 412 aa16.83■□□□□ 0.28
SYNRG-223ENST00000616179 COG7P83436 770 aa16.83■□□□□ 0.28
SYNRG-223ENST00000616179 SUPT20HQ8NEM7 779 aa16.83■□□□□ 0.28
SYNRG-223ENST00000616179 WDR66Q8TBY9 1149 aa16.83■□□□□ 0.28
SYNRG-223ENST00000616179 C9orf72Q96LT7 481 aa16.83■□□□□ 0.28
SYNRG-223ENST00000616179 PAGR1Q9BTK6 254 aa16.83■□□□□ 0.28
SYNRG-223ENST00000616179 RARAP10276 462 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms