RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 KANK3Q6NY19 840 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 KCNV1Q6PIU1 500 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 USP17L6PQ6QN14 398 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 KRBA2Q6ZNG9 492 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 CEP57L1Q8IYX8 460 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.04□□□□□ -0.48
COL4A1-205ENST00000615732 PYM1Q9BRP8 204 aaKnown RBP12.04□□□□□ -0.48
COL4A1-205ENST00000615732 NAT10Q9H0A0 1025 aaKnown RBP12.04□□□□□ -0.48
COL4A1-205ENST00000615732 DNAJC25Q9H1X3 360 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 TUT1Q9H6E5 874 aaKnown RBP12.04□□□□□ -0.48
COL4A1-205ENST00000615732 RIC8AQ9NPQ8 531 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 MAP3K20Q9NYL2 800 aaKnown RBP12.04□□□□□ -0.48
COL4A1-205ENST00000615732 KIAA1468Q9P260 1216 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 GOLGA6L19H0YKK7 550 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 LAD1O00515 517 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 WNT7AO00755 349 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 POLR2DO15514 142 aaKnown RBP12.03□□□□□ -0.48
COL4A1-205ENST00000615732 AMHP03971 560 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 TGFB3P10600 412 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 IL9P15248 144 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 KCNA5P22460 613 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 HOXC8P31273 242 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 PLCB2Q00722 1185 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 TRAF1Q13077 416 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 LETM2Q2VYF4 491 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 PLEKHG4Q58EX7 1191 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 METTL7BQ6UX53 244 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 FAM178BQ8IXR5 827 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 FBXO22Q8NEZ5 403 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 INPP4AQ96PE3 977 aaPredicted RBP12.03□□□□□ -0.48
COL4A1-205ENST00000615732 PPP1R9BQ96SB3 815 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 GPR20Q99678 358 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 RNPEPQ9H4A4 650 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 CBX8Q9HC52 389 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 SETD4Q9NVD3 440 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 TMEM260Q9NX78 707 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 PKD2L1Q9P0L9 805 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 USP25Q9UHP3 1055 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 EMSYQ7Z589 1322 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 MYH7BA7E2Y1 1941 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 COL4A6Q14031 1691 aa12.03□□□□□ -0.48
COL4A1-205ENST00000615732 BECN2A8MW95 431 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 NEMFO60524 1076 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 CCNT1O60563 726 aaKnown RBP12.02□□□□□ -0.49
COL4A1-205ENST00000615732 UPP2O95045 317 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 OR52Z1P0C646 297 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 LONP1P36776 959 aaKnown RBP12.02□□□□□ -0.49
COL4A1-205ENST00000615732 ZNF165P49910 485 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 NLRP12P59046 1061 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 HTRA4P83105 476 aaPredicted RBP12.02□□□□□ -0.49
COL4A1-205ENST00000615732 ARHGAP4P98171 946 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 UBE2SQ16763 222 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 DTHD1Q6ZMT9 781 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 ELOA2Q8IYF1 753 aaPredicted RBP12.02□□□□□ -0.49
COL4A1-205ENST00000615732 GJD3Q8N144 294 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 SAMD3Q8N6K7 520 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 PDILTQ8N807 584 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 SP7Q8TDD2 431 aaPredicted RBP12.02□□□□□ -0.49
COL4A1-205ENST00000615732 TBCKQ8TEA7 893 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 LMBR1Q8WVP7 490 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 DHX58Q96C10 678 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 NAP1L4Q99733 375 aaKnown RBP12.02□□□□□ -0.49
COL4A1-205ENST00000615732 PSTPIP2Q9H939 334 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 SERTAD1Q9UHV2 236 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 INSL6Q9Y581 213 aa12.02□□□□□ -0.49
COL4A1-205ENST00000615732 SPATA31C2B4DYI2 1134 aa12.01□□□□□ -0.49
COL4A1-205ENST00000615732 CSPG5O95196 566 aa12.01□□□□□ -0.49
COL4A1-205ENST00000615732 PTMAP06454 111 aaKnown RBP12.01□□□□□ -0.49
COL4A1-205ENST00000615732 MARK3P27448 753 aa12.01□□□□□ -0.49
COL4A1-205ENST00000615732 ICAM3P32942 547 aa12.01□□□□□ -0.49
COL4A1-205ENST00000615732 PRPHP41219 470 aa12.01□□□□□ -0.49
COL4A1-205ENST00000615732 PNOCQ13519 176 aa12.01□□□□□ -0.49
COL4A1-205ENST00000615732 NEDD9Q14511 834 aa12.01□□□□□ -0.49
COL4A1-205ENST00000615732 LONRF3Q496Y0 759 aa12.01□□□□□ -0.49
COL4A1-205ENST00000615732 MCTP2Q6DN12 878 aa12.01□□□□□ -0.49
COL4A1-205ENST00000615732 PTCRAQ6ISU1 281 aaPredicted RBP12.01□□□□□ -0.49
COL4A1-205ENST00000615732 RUFY4Q6ZNE9 571 aa12.01□□□□□ -0.49
COL4A1-205ENST00000615732 C11orf57Q6ZUT1 292 aaPredicted RBP12.01□□□□□ -0.49
COL4A1-205ENST00000615732 RASSF8Q8NHQ8 419 aa12.01□□□□□ -0.49
COL4A1-205ENST00000615732 SEPT8Q92599 483 aa12.01□□□□□ -0.49
COL4A1-205ENST00000615732 ERCC4Q92889 916 aaPredicted RBP12.01□□□□□ -0.49
COL4A1-205ENST00000615732 YME1L1Q96TA2 773 aa12.01□□□□□ -0.49
COL4A1-205ENST00000615732 ZNF215Q9UL58 517 aaPredicted RBP12.01□□□□□ -0.49
COL4A1-205ENST00000615732 NLRC5Q86WI3 1866 aa12.01□□□□□ -0.49
COL4A1-205ENST00000615732 ATG2AQ2TAZ0 1938 aa12.01□□□□□ -0.49
COL4A1-205ENST00000615732 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12□□□□□ -0.49
COL4A1-205ENST00000615732 PRR33A8MZF0 331 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 BIN1O00499 593 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 MEIS2O14770 477 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 STAM2O75886 525 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 SMC2O95347 1197 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 GHRP10912 638 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 SSTR3P32745 418 aaPredicted RBP12□□□□□ -0.49
COL4A1-205ENST00000615732 TPM4P67936 248 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 POSTNQ15063 836 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 EPC2Q52LR7 807 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 PCNX4Q63HM2 1172 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 LUZP1Q86V48 1076 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 NEK9Q8TD19 979 aa12□□□□□ -0.49
COL4A1-205ENST00000615732 SMARCE1Q969G3 411 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms