RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 CREB3O43889 395 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 FSBPO95073 299 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 DESP17661 470 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 MARCKSP29966 332 aaPredicted RBP9.62□□□□□ -0.87
VPS11-206ENST00000614944 FNTAP49354 379 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 KRT72Q14CN4 511 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 UBE2SQ16763 222 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 OTUD6AQ7L8S5 288 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 CCDC84Q86UT8 332 aaPredicted RBP9.62□□□□□ -0.87
VPS11-206ENST00000614944 TRIM58Q8NG06 486 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 JAKMIP2Q96AA8 810 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 MS4A4AQ96JQ5 239 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 IWS1Q96ST2 819 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 P2RX7Q99572 595 aaKnown RBP9.62□□□□□ -0.87
VPS11-206ENST00000614944 TSC22D3Q99576 134 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 PDE11AQ9HCR9 933 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 SLC39A2Q9NP94 309 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 STK17AQ9UEE5 414 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 KDM3AQ9Y4C1 1321 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 EFCAB8A8MWE9 144 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 TRIM21P19474 475 aaKnown RBP9.62□□□□□ -0.87
VPS11-206ENST00000614944 SARSP49591 514 aaKnown RBP9.62□□□□□ -0.87
VPS11-206ENST00000614944 CUL4BQ13620 913 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 TMEM132BQ14DG7 1078 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 ZYXQ15942 572 aaKnown RBP9.62□□□□□ -0.87
VPS11-206ENST00000614944 LETM2Q2VYF4 491 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 B3GNT9Q6UX72 402 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 MAGEC3Q8TD91 643 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 ZFAND2BQ8WV99 257 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 SLC5A5Q92911 643 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 SLC10A4Q96EP9 437 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 TMEM60Q9H2L4 133 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 ACAD9Q9H845 621 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 GPBP1L1Q9HC44 474 aaPredicted RBP9.62□□□□□ -0.87
VPS11-206ENST00000614944 MKS1Q9NXB0 559 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 MORF4L1Q9UBU8 362 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 UBIAD1Q9Y5Z9 338 aa9.62□□□□□ -0.87
VPS11-206ENST00000614944 MEIS1O00470 390 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 CNMDO75829 334 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 CCDC192P0DO97 292 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 GJA5P36382 358 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 CCT5P48643 541 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 IRF5Q13568 498 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 SNCBQ16143 134 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 TMCO4Q5TGY1 634 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 CCDC174Q6PII3 467 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 SYTL5Q8TDW5 730 aaPredicted RBP9.61□□□□□ -0.87
VPS11-206ENST00000614944 CACTINQ8WUQ7 758 aaKnown RBP9.61□□□□□ -0.87
VPS11-206ENST00000614944 SPIRE2Q8WWL2 714 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 HAS1Q92839 578 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 RIT2Q99578 217 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 CENPHQ9H3R5 247 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 SLC8A1P32418 973 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 PPP2R5CQ13362 524 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 TMEM119Q4V9L6 283 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 COBLL1Q53SF7 1204 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 SPRYD7Q5W111 196 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 USP17L6PQ6QN14 398 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.61□□□□□ -0.87
VPS11-206ENST00000614944 ABRAQ8N0Z2 381 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 ERMNQ8TAM6 284 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 MORC4Q8TE76 937 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 SYMPKQ92797 1274 aaKnown RBP9.61□□□□□ -0.87
VPS11-206ENST00000614944 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.61□□□□□ -0.87
VPS11-206ENST00000614944 LRRC27Q9C0I9 530 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 KIAA1468Q9P260 1216 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 CORO1CQ9ULV4 474 aaPredicted RBP9.61□□□□□ -0.87
VPS11-206ENST00000614944 PLXNB2O15031 1838 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 SMCHD1A6NHR9 2005 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 A0A1B0GVL5 298 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 GOLGA6L9A6NEM1 432 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 MAP2K7O14733 419 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 KIAA0754O94854 1291 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 YY1P25490 414 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 HDAC4P56524 1084 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 PTK7Q13308 1070 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 USH1GQ495M9 461 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 PDXDC2PQ6P474 469 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 GPR161Q8N6U8 529 aaKnown RBP9.61□□□□□ -0.87
VPS11-206ENST00000614944 RDM1Q8NG50 284 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 FAM76AQ8TAV0 307 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 CTNNBL1Q8WYA6 563 aaPredicted RBP9.61□□□□□ -0.87
VPS11-206ENST00000614944 CLMNQ96JQ2 1002 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 CLIC6Q96NY7 704 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 SENP7Q9BQF6 1050 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 CENPOQ9BU64 300 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 MROH8Q9H579 483 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 NRBP1Q9UHY1 535 aa9.61□□□□□ -0.87
VPS11-206ENST00000614944 KIAA1217Q5T5P2 1943 aa9.6□□□□□ -0.87
VPS11-206ENST00000614944 SLC37A4O43826 429 aa9.6□□□□□ -0.87
VPS11-206ENST00000614944 GNAT1P11488 350 aa9.6□□□□□ -0.87
VPS11-206ENST00000614944 STAT3P40763 770 aa9.6□□□□□ -0.87
VPS11-206ENST00000614944 SPIRE1Q08AE8 756 aa9.6□□□□□ -0.87
VPS11-206ENST00000614944 TREML2Q5T2D2 321 aa9.6□□□□□ -0.87
VPS11-206ENST00000614944 PACS1Q6VY07 963 aa9.6□□□□□ -0.87
VPS11-206ENST00000614944 REM2Q8IYK8 340 aaPredicted RBP9.6□□□□□ -0.87
VPS11-206ENST00000614944 MXRA8Q9BRK3 442 aa9.6□□□□□ -0.87
VPS11-206ENST00000614944 ASCC2Q9H1I8 757 aaPredicted RBP9.6□□□□□ -0.87
VPS11-206ENST00000614944 RAVER2Q9HCJ3 691 aaKnown RBP9.6□□□□□ -0.87
VPS11-206ENST00000614944 DISC1Q9NRI5 854 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms